EY711015

Overview
NameEY711015
Unique NameEY711015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711015 vs. ExPASy Swiss-Prot
Match: SAMH1_DICDI (Protein SAMHD1 homolog OS=Dictyostelium discoideum GN=DDB_G0272484 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.502e-30
Identity = 69/216 (31.94%), Postives = 118/216 (54.63%), Query Frame = 1
Query:    7 VRDEICYRAKEYLTVHKLFYTRADLYRTIYTHPKVKAIELMVVDALLKANDFLEISSSIEDPSDYWKLDDSIIKTIEIAPNQELKESXXXXXXXXXXNLYQFCNEYTVPKENLEHFKDVTPQDIVCSQKNGGAILKEEDVAVSNVRIDLARGRHNPLESINFFKDYESKEKFPIPDNRISHLLPACYXDMIVRVYSKKPELVGAISEAFENFQXKH 654
            + D+IC+ +KE   +++LF+TR  L++ +YTH   K+IE M+ DA  +A+ FL+IS  +EDP ++  L DS+++ IE +   EL++S          NLY+F +E  V  + +    D   +DI    K G  IL E D+ V N++++ A    +P++S  F+  Y+S + F I     SHL+P  + +  +R++ +  E    +  AF      H
Sbjct:  284 IDDQICFLSKEIYNLYELFHTRYSLHKLVYTHKVGKSIEFMIADAFTEADQFLKISDQLEDPKEFINLSDSLLRRIETSKEPELEKSRKIIKNIRNRNLYKFVDEIIVSTDKIRWSADSLAEDIA---KVGNGIL-ESDIIVQNLKLNYAFKDKDPVQSTRFYTRYDSTQSFTIKKEETSHLIPNQFQEERIRIFCRSKEKCEQVQTAFRKLLKNH 495          
BLAST of EY711015 vs. ExPASy Swiss-Prot
Match: SAMH1_BOVIN (SAM domain and HD domain-containing protein 1 OS=Bos taurus GN=SAMHD1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.533e-19
Identity = 62/214 (28.97%), Postives = 103/214 (48.13%), Query Frame = 1
Query:   19 ICYRAKEYLTVHKLFYTRADLYRTIYTHPKVKAIELMVVDALLKANDFLE----------ISSSIEDPSDYWKLDDSIIKTIEIAPNQELKESXXXXXXXXXXNLYQFCNE-----YTVPKENLEHFKDVTPQDIVCSQKNG---GAILKEEDVAVSNVRIDLARGRHNPLESINFFKDYESKEKFPIPDNRISHLLPACYXDMIVRVYSKKPE 606
            IC R KE   ++ +F+TR  L+R  Y H     I+ M+ DA LKA+D +E          IS++I+D   + KL D+I   I  + +  L ++          NLY+F  E       + KEN EH     P ++  ++ +     A LK ED+ V  + +D      NP++ + F+   +  +   I  N++S  LP  + + ++RVY KK +
Sbjct:  338 ICTREKEVGNLYDMFHTRNCLHRRAYQHKVGNIIDTMITDAFLKADDHIEITGSAGRKYHISTAIDDMEAFTKLTDNIFLEILYSTDPNLNDARMILKKIESRNLYKFVGETQPMIQRIKKENYEHL----PNEVASAKPSDVELEAELKAEDLIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAVMITRNQVSQFLPETFAEQLIRVYCKKTD 547          
BLAST of EY711015 vs. ExPASy Swiss-Prot
Match: SAMH1_MOUSE (SAM domain and HD domain-containing protein 1 OS=Mus musculus GN=Samhd1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.732e-19
Identity = 59/209 (28.23%), Postives = 105/209 (50.24%), Query Frame = 1
Query:   19 ICYRAKEYLTVHKLFYTRADLYRTIYTHPKVKAIELMVVDALLKANDFLEI----------SSSIEDPSDYWKLDDSIIKTIEIAPNQELKESXXXXXXXXXXNLYQFCNEYTVPKENLEHFK-DVTPQDIVCS--QKNGGAILKEEDVAVSNVRIDLARGRHNPLESINFFKDYESKEKFPIPDNRISHLLPACYXDMIVRVYSKKPE 606
            IC R KE   ++ +F+TR  L+R  Y H     I++M+ DA LKA+ ++EI          S++I+D   + KL D+I   +  + + +L E+          NLY++  E    +E +   + +  PQ++  +  +K     LK ED  V  + +D      NP++ ++F+    SK+   I   ++S LLP  + + ++RVY KK +
Sbjct:  361 ICSREKEVGNLYDMFHTRNCLHRRAYQHKISNLIDIMITDAFLKADPYVEITGTAGKKFRISTAIDDMEAFTKLTDNIFLEVLHSTDPQLSEAQSILRNIECRNLYKYLGETQPKREKIRKEEYERLPQEVAKAKPEKAPDVELKAEDFIVDVINVDYGMEDKNPIDRVHFYCKSNSKQAVRINKEQVSQLLPEKFAEQLIRVYCKKKD 569          
BLAST of EY711015 vs. ExPASy Swiss-Prot
Match: SAMH1_HUMAN (SAM domain and HD domain-containing protein 1 OS=Homo sapiens GN=SAMHD1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.548e-18
Identity = 61/210 (29.05%), Postives = 104/210 (49.52%), Query Frame = 1
Query:   19 ICYRAKEYLTVHKLFYTRADLYRTIYTHPKVKAIELMVVDALLKANDFLE----------ISSSIEDPSDYWKLDDSIIKTIEIAPNQELKESXXXXXXXXXXNLYQFCNEYTVP----KENLEHFKDVTPQDIVCSQKNG--GAILKEEDVAVSNVRIDLARGRHNPLESINFFKDYESKEKFPIPDNRISHLLPACYXDMIVRVYSKK 600
            IC R KE   ++ +F+TR  L+R  Y H     I+ M+ DA LKA+D++E          IS++I+D   Y KL D+I   I  + + +LK++          NL+++  E T P    K   E ++ + P+++  ++        LK ED  V  + +D      NP++ ++F+          I  N++S LLP  + + ++RVY KK
Sbjct:  349 ICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGE-TQPTGQIKIKREDYESL-PKEVASAKPKVLLDVKLKAEDFIVDVINMDYGMQEKNPIDHVSFYCKTAPNRAIRITKNQVSQLLPEKFAEQLIRVYCKK 556          
BLAST of EY711015 vs. ExPASy Swiss-Prot
Match: SAMH1_XENLA (SAM domain and HD domain-containing protein 1 OS=Xenopus laevis GN=samhd1 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 63/215 (29.30%), Postives = 102/215 (47.44%), Query Frame = 1
Query:   10 RDEICYRAKEYLTVHKLFYTRADLYRTIYTHPKVKAIELMVVDALLKANDFLEI----------SSSIEDPSDYWKLDDSIIKTIEIAPNQELKESXXXXXXXXXXNLYQFCNEYTVPKEN--LEHFK-DVTPQDIVCSQKNGGAI---LKEEDVAVSNVRIDLARGRHNPLESINFFKDYESKEKFPIPDNRISHLLPACYXDMIVRVYSKKPE 606
            +  IC R KE   ++ +F+TR  L+R  Y H     IE M+ DA +KA+  ++I          S S++D   Y KL D+I   I  + +  LKE+          +LY++  + T P  N  +E  K D  P D+  S     A    L  ED  V  + +D      NP+ ++ F+   + ++   I  +++S LLP  + + I+RVY KK +
Sbjct:  351 KKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFVKADPHIKIEGANGKYYSISGSVDDMVAYTKLTDNIYHQILYSNDPNLKEAREILQKVERRHLYKYIGQ-THPHSNSRIEPDKYDKLPADLASSVPQTSAKDVELHAEDFIVDVIHMDYGMKEQNPINNVRFYCKADPRKAIKIRRDQVSQLLPEKFAEQIIRVYCKKTD 564          
BLAST of EY711015 vs. ExPASy Swiss-Prot
Match: SAMH1_DANRE (SAM domain and HD domain-containing protein 1 OS=Danio rerio GN=samhd1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.126e-16
Identity = 61/213 (28.64%), Postives = 101/213 (47.42%), Query Frame = 1
Query:   10 RDEICYRAKEYLTVHKLFYTRADLYRTIYTHPKVKAIELMVVDALLKANDFLE----------ISSSIEDPSDYWKLDDSIIKTIEIAPNQELKESXXXXXXXXXXNLYQFCNEYTVPKENLEHFKDVT---PQDIVCSQKNG-GAILKEEDVAVSNVRIDLARGRHNPLESINFFKDYESKEKFPIPDNRISHLLPACYXDMIVRVYSKKPE 606
            R  IC R KE   ++ +F+TR  L+R  Y H     IE M+ +A LKA+  ++          ISS+IED   Y KL D I + I  +   EL E+           LY+ C   T  + N++  ++      +++  S+  G    L  ED  VS + +D      NP+ +++F+   +  +   I   ++S LLP  + + ++RVY KK +
Sbjct:  326 RKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKVGNIIETMITEAFLKADPHIQIQGSSGRIFTISSAIEDMEAYSKLTDHIFEQILYSSGPELSEARAILQNIICRRLYK-CVGQTTSETNVDVSQEKLLDWAKELARSKPTGTEGNLIAEDFVVSVIHMDYGMKEKNPINNVHFYCKNDPTKAIKIHKKQVSKLLPERFAEQLIRVYCKKTD 537          
BLAST of EY711015 vs. ExPASy Swiss-Prot
Match: SAMH1_CHICK (SAM domain and HD domain-containing protein 1 OS=Gallus gallus GN=SAMHD1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.328e-15
Identity = 65/223 (29.15%), Postives = 103/223 (46.19%), Query Frame = 1
Query:   19 ICYRAKEYLTVHKLFYTRADLYRTIYTHPKVKAIELMVVDALLKANDFLE----------ISSSIEDPSDYWKLDDSIIKTIEIAPNQELKESXXXXXXXXXXNLYQFCNEYTVPKENLEHFKDV---TPQDIVCSQKN---GGAILKEEDVAVSNVRIDLARGRHNPLESINFFKDYESKEKFPIPDNRISHLLPACYXDMIVRVYSKK--PELVGAISEAF 633
            IC R KE   ++ +F+TR  L+R  Y H     IE+M+ +A  KA+ F +          IS+++ED   Y KL D+I   I  +   EL E+           LY+F  E T P++  E  KD       DI  S+         L  ED  V  V +D      NP++++ F+   +  +   +   ++S LLP  + + ++RVY K+  P +V A  + F
Sbjct:  340 ICARDKEVGNLYDMFHTRNCLHRRAYQHKVGNIIEIMITEAFQKADCFFQIEGSKGKLYHISTAMEDMEAYTKLTDNIYLEILHSSRPELSEAREILHKIERRELYKFLGE-TQPEKVNEIPKDEYDGLAGDIANSKPEKDPPDVELTAEDFIVDVVNMDYGMKDQNPIDNVLFYCKADPSKAIKVSKEQVSRLLPGTFSEQVIRVYCKRQDPIIVSAAKQYF 561          
The following BLAST results are available for this feature:
BLAST of EY711015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SAMH1_DICDI1.502e-3031.94Protein SAMHD1 homolog OS=Dictyostelium discoideum... [more]
SAMH1_BOVIN4.533e-1928.97SAM domain and HD domain-containing protein 1 OS=B... [more]
SAMH1_MOUSE7.732e-1928.23SAM domain and HD domain-containing protein 1 OS=M... [more]
SAMH1_HUMAN8.548e-1829.05SAM domain and HD domain-containing protein 1 OS=H... [more]
SAMH1_XENLA1.612e-1629.30SAM domain and HD domain-containing protein 1 OS=X... [more]
SAMH1_DANRE6.126e-1628.64SAM domain and HD domain-containing protein 1 OS=D... [more]
SAMH1_CHICK2.328e-1529.15SAM domain and HD domain-containing protein 1 OS=G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-G03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711015 ID=EY711015; Name=EY711015; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGTGATGAGATTTGCTATCGTGCCAAAGAGTATCTAACTGT
CCACAAGTTATTTTACACTCGCGCGGATCTGTATAGAACAATATATACAC
ATCCAAAAGTAAAGGCAATAGAGCTTATGGTTGTGGATGCCTTGTTGAAA
GCAAATGATTTTCTAGAAATTTCGTCTTCCATTGAAGATCCTTCGGATTA
CTGGAAGTTGGATGACTCAATAATCAAAACTATTGAGATAGCTCCAAACC
AAGAACTCAAGGAATCTAGGGATTTGATTTTGCGGATCCGAAGGAGGAAT
TTGTATCAGTTTTGTAATGAGTACACTGTTCCAAAAGAGAATCTAGAACA
TTTCAAAGATGTTACCCCACAAGATATTGTTTGTTCCCAGAAAAATGGTG
GAGCAATACTAAAAGAAGAGGACGTTGCTGTTAGCAATGTGAGGATTGAT
TTGGCTCGTGGAAGGCATAATCCTCTGGAAAGCATTAACTTTTTCAAGGA
TTATGAAAGCAAGGAAAAATTCCCCATACCTGATAATCGCATTAGTCACT
TGTTGCCTGCATGTTATCANGACATGATTGTGAGGGTGTACTCCAAAAAA
CCTGAGCTGGTTGGAGCAATCTCCGAGGCTTTTGAAAACTTTCAGNTAAA
ACATATGGGATCAAAGCACAGTACATGAAACTCCAGAGAAGAAGAAAAAG
CGCTTATGAAGTGACCATCNTTGTAGATGTCTTTTCTGGNTGACATCCAG
CCAANTATATAATTTAATATATATANNGTGCAGTCAGCAAAATCATACAG
TTCNGACTCACACACCACAAAGAAACATGAGTTTGAAATGCTTTTTCCAC
CCTGTTTCTACTTACCCTTNATTCACCACTAAAATCAGTTGNATGNTGAA
AAAAAAAAAAAAGCCGGCCCCTCT
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