EY711012

Overview
NameEY711012
Unique NameEY711012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY711012 vs. ExPASy Swiss-Prot
Match: KASC1_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 8.697e-12
Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 1 
Query:  571 VTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEI 756
            V+  K+    +KRVV+TGMGLVS  G++ D +Y  LL G SGIS I+ FD + FPT+   +I
Sbjct:   50 VSAPKRETDPKKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQI 111

HSP 2 Score: 28.1054 bits (61), Expect = 8.697e-12
Identity = 11/37 (29.73%), Postives = 21/37 (56.76%), Query Frame = 3 
Query:  756 KSFSTDGWVAPKLSQRMDKFMLYLLTAGKXXLADGGI 866
            + FS++G++  K  +R+D  + Y + AGK  L    +
Sbjct:  112 RGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANL 148
[Close]
BLAST of EY711012 vs. ExPASy Swiss-Prot
Match: KASC1_HORVU (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.130e-11
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 1 
Query:  601 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEI 756
            +KRVV+TGMGL S  G + D FY+ LL G SG+  I+ FD +SFPT+ A +I
Sbjct:   47 RKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQI 98

HSP 2 Score: 28.4906 bits (62), Expect = 1.130e-11
Identity = 11/37 (29.73%), Postives = 22/37 (59.46%), Query Frame = 3 
Query:  756 KSFSTDGWVAPKLSQRMDKFMLYLLTAGKXXLADGGI 866
            + FS++G++  K  +R+D  + Y + +GK  L   G+
Sbjct:   99 RGFSSEGYIDGKNDRRLDDCIRYCILSGKKALESAGL 135
The following BLAST results are available for this feature:
BLAST of EY711012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
KASC1_ARATH8.697e-1248.393-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
KASC1_HORVU1.130e-1153.853-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-F10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711012 ID=EY711012; Name=EY711012; organism=Citrus sinensis; type=EST; length=927bp
CCACGCGTCCGCACGATAAGACAAAGAGTTAGAGAGTGCGTTGAGATTCT
TCACTTCATCTGGGTTTTCTTGATTTTTGTTTTTTTTTTCTCTGCTTTTG
GGTTAATAAAAATGGCGTCATCTTGTTCGTTCACATCTCCGCTGTGCACG
TGGCTGGTGGCGGCTTGCATGTCCTTCACGTGCGGCAGCCGGGACCCACA
CCAACCGCCATCCGTGCTACGTCGCTACACCAACAACAAGAGAGAAGGAC
TCTCAGCGGCAAGGAGGAGGAAACTTTCGGCGAAATGTGGTGTTGGTGGT
GAAGTTGTAAACGGCGGCTTGGTCTCGTCGTTTAGTGGATCTAGTCACAG
CATTCAGAGCCTAATGGCTTCTTGCTTGCCCTTTGAGCCTTGCAACGAAT
ATTACAGCTCCGTTTCGTCGCTTGGTTTCTTTGGTGATAATGGCTTCTCT
TCGTTTTTTGGATCCAATAATAGTACTGTCACTCTTAATCGAAGGCAACG
GCGACTCAGACTCAATCGAGTCACCCGTTCTGGGGAAGCCATGGCTGTAG
CTGTGCAACCTGATGAGGAAGTCACAACAAAAAAGAAACCTCATATGAAG
CAAAAGCGAGTGGTTGTGACAGGGATGGGTTTGGTGAGTCCGCTTGGTCA
TGAACCAGATGTCTTCTACAATAATTTGCTCGAGGGTGTGAGTGGTATAA
GTGAGATAGAGACTTTCGACTGTACTAGTTTTCCTACGAAAATTGCTGCA
GAGATAAATCTTTCTCTACAGATGGATGGGTTGCACCAAAACTTTCCCAG
AGGATGGATAAGTTTATGCTGTACCTGCTCACGGCTGGCAAGAGNNGCTT
GGCGGATGGTGGAATACAGAAATGTCATGAATGAGTTAGATAATCTCAAT
GTGGATGTTGATTGGCTCCGGATTTGG
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