EY711001

Overview
NameEY711001
Unique NameEY711001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711001 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.082e-89
Identity = 172/279 (61.65%), Postives = 203/279 (72.76%), Query Frame = 2
Query:   11 EDEYDQLPPIKILKKSQFERLSKSQKKSYLDELDYREILYFKKQLKEESRRRKENKLSKEECLPNDSTPDEQTSSEAVMLPDMVVPPSFDPDCLAYRYRCLVTSDQWLVRPVLDLQGWDHDVGFDGINLETAVEIKSNVFASIAGQITKDKHDFNIHSESAAAYV-DPEGPTYCIGLDVQSSGKDMIYTVHGNTKLRNFKHNVTDCGVSLTSFGNKNYVGAKLEDSLLVGKRLKLVMNAGRMGGSGQVAYGGXV*SHF*RADYPVRNDNIILXMTALSF 844
            EDEYDQLP I+IL KS+FE+LSKSQKK YLDELDYRE LY KKQLKEE RRR++ KL +EE L +     EQ    AV LPDM  P SFD D  A+RYRC+   DQWLVRPV D QGWD DVGFDGIN+ETA +I  N+FAS  GQ+++DK  F I SE+ AAY  +    T+ + +D+QSSG+D++Y+  G TKL+ FKHN TD GV LTSFG K YVG KLED+LLVGKR+KL  NAG+M GSGQ A GG   +     DYPVRN+ I L MTALSF
Sbjct:  436 EDEYDQLPTIRILGKSRFEKLSKSQKKEYLDELDYRETLYLKKQLKEECRRRRDEKLVEEENLEDT----EQRDQAAVPLPDMAGPDSFDSDFPAHRYRCVSAGDQWLVRPVYDPQGWDRDVGFDGINIETAAKINRNLFASATGQVSRDKQRFTIQSETNAAYTRNFREQTFSVAVDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGGKYYVGGKLEDTLLVGKRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMTALSF 710          
BLAST of EY711001 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.737e-61
Identity = 118/271 (43.54%), Postives = 174/271 (64.21%), Query Frame = 2
Query:   11 EDEYDQLPPIKILKKSQFERLSKSQKKSYLDELDYREILYFKKQLKEESRRRKENKLSKEEC--LPN---DSTPDEQT--SSEAVMLPDMVVPPSFDPDCLAYRYRCLVTSDQWLVRPVLDLQGWDHDVGFDGINLETAVEIKSNVFASIAGQITKDKHDFNIHSESAAAYVDPEGPTYCIGLDVQSSGKDMIYTVHGNTKLRNFKHNVTDCGVSLTSFGNKNYVGAKLEDSLLVGKRLKLVMNAGRMGGSGQVAYGGXV*SHF*RADYPV 802
            E EYD+LPP K L K++  +LSKSQKK YLDE++YRE L+ K+Q+KEE +RRK  K    E   +PN   ++  +E++  +S  V +PD+ +P SFD D   +RYR L TS+QWLVRPVL+  GWDHD+G++G+N E    +K  +  S +GQ+TKDK D ++  E A++    EG +  +G D+Q++GK++ YT+   T+   F+ N    G+S+T  G+    G K+ED L+  KR ++VM+ G M   G VAYGG + + F   DYP+
Sbjct:  732 ESEYDELPPFKRLTKAEMTKLSKSQKKEYLDEMEYREKLFMKRQMKEERKRRKLLKKFAAEIKDMPNGYSENVEEERSEPASVPVPMPDLSLPASFDSDNPTHRYRYLDTSNQWLVRPVLETHGWDHDIGYEGVNAERLFVVKDKIPVSFSGQVTKDKKDAHVQLELASSVKHGEGRSTSLGFDMQNAGKELAYTIRSETRFNKFRKNKAAAGLSVTLLGDSVSAGLKVEDKLIANKRFRMVMSGGAMTSRGDVAYGGTLEAQFRDKDYPL 1002          
BLAST of EY711001 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.395e-59
Identity = 118/271 (43.54%), Postives = 166/271 (61.25%), Query Frame = 2
Query:   11 EDEYDQLPPIKILKKSQFERLSKSQKKSYLDELDYREILYFKKQLKEESRRRKENKLSKEEC--LPN--DSTPDEQTSSEA---VMLPDMVVPPSFDPDCLAYRYRCLVTSDQWLVRPVLDLQGWDHDVGFDGINLETAVEIKSNVFASIAGQITKDKHDFNIHSESAAAYVDPEGPTYCIGLDVQSSGKDMIYTVHGNTKLRNFKHNVTDCGVSLTSFGNKNYVGAKLEDSLLVGKRLKLVMNAGRMGGSGQVAYGGXV*SHF*RADYPV 802
            E EYDQLPP K L K+Q   LSKSQKK YLDE++YRE L  KKQ+KEE +RRK  K    E   LP+      +E++   A   V +PD+ +P SFD D   +RYR L +S+QWLVRPVL+  GWDHD+G++G+N E    +K  +  S++GQ+TKDK D N+  E A++    EG +  +G D+Q+ GK++ YT+   T+  NF+ N    G+S+T  G+    G K+ED  +  K  ++VM+ G M   G  AYGG + +     DYP+
Sbjct:  850 ESEYDQLPPFKSLTKAQMATLSKSQKKQYLDEMEYREKLLMKKQMKEERKRRKMFKKFAAEIKDLPDGYSENVEEESGGPASVPVPMPDLSLPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDIGYEGVNAERLFVVKEKIPISVSGQVTKDKKDANVQLEMASSVKHGEGKSTSLGFDMQTVGKELAYTLRSETRFNNFRRNKAAAGLSVTHLGDSVSAGLKVEDKFIASKWFRIVMSGGAMTSRGDFAYGGTLEAQLRDKDYPL 1120          
BLAST of EY711001 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.150e-57
Identity = 122/275 (44.36%), Postives = 160/275 (58.18%), Query Frame = 2
Query:   11 EDEYDQLPPIKILKKSQFERLSKSQKKSYLDELDYREILYFKKQLKEESRRRKE-----NKLSKEEC-LPNDSTPDEQTSSEAVM--LPDMVVPPSFDPDCLAYRYRCLVTSDQWLVRPVLDLQGWDHDVGFDGINLETAVEIKSNVFASIAGQITKDKHDFNIHSESAAAYVDPEGPTYCIGLDVQSSGKDMIYTVHGNTKLRNFKHNVTDCGVSLTSFGNKNYVGAKLEDSLLVGKRLKLVMNAGRMGGSGQVAYGGXV*SHF*RADYPVRND 811
            +DEYDQLPP K L+K+Q  +LS  Q+K+Y +E DYR  L  KKQ +EE +R KE      KL + E   P +    E  +  AV   LPDMV+PPSFD D  AYRYR L  + Q L RPVLD  GWDHD G+DG+N E ++ + S   A+   Q+TKDK +FNIH +S+ +    E  +   G D+Q+ GK + Y V G TK +N + N T  G S+T  G     G KLED + +GKRL LV + G M   G  AYG  +      AD+P+  D
Sbjct: 1142 DDEYDQLPPFKPLRKTQLAKLSNEQRKAYFEEYDYRVKLLQKKQWREELKRMKEMKKNGKKLGESEFGYPGEEDDPENGAPAAVPVPLPDMVLPPSFDSDNSAYRYRYLEPTSQLLTRPVLDTHGWDHDCGYDGVNAEHSLALASRFPATATVQVTKDKKEFNIHLDSSVSAKHGENGSTMAGFDIQNVGKQLAYVVRGETKFKNLRKNKTTVGGSVTFLGENIATGVKLEDQIALGKRLVLVGSTGTMRSQGDSAYGANLEVRLREADFPIGQD 1416          
The following BLAST results are available for this feature:
BLAST of EY711001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
TOC90_ARATH1.082e-8961.65Translocase of chloroplast 90, chloroplastic OS=Ar... [more]
TC120_ARATH4.737e-6143.54Translocase of chloroplast 120, chloroplastic OS=A... [more]
TC132_ARATH3.395e-5943.54Translocase of chloroplast 132, chloroplastic OS=A... [more]
TC159_ARATH4.150e-5744.36Translocase of chloroplast 159, chloroplastic OS=A... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711001 ID=EY711001; Name=EY711001; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGAAGATGAATATGATCAGTTACCACCAATAAAAATCCTGA
AAAAATCTCAGTTTGAAAGGCTGAGTAAATCCCAGAAAAAGTCCTATCTT
GATGAGCTCGATTATCGAGAGATTCTTTATTTTAAGAAACAACTAAAAGA
AGAGTCCCGTAGACGAAAGGAGAATAAGCTTTCTAAAGAGGAATGTCTTC
CAAATGACAGTACTCCTGACGAACAGACGTCTTCAGAAGCTGTTATGTTA
CCAGATATGGTAGTGCCTCCTAGTTTTGACCCAGATTGCCTTGCATACAG
GTATCGCTGCCTAGTTACAAGTGACCAGTGGCTTGTGAGGCCAGTTCTTG
ATCTCCAAGGATGGGATCATGACGTGGGCTTTGACGGAATAAACTTGGAG
ACAGCTGTGGAGATAAAAAGCAATGTCTTTGCCTCCATTGCGGGACAGAT
AACCAAGGACAAGCATGATTTCAATATTCATTCTGAGAGTGCTGCAGCTT
ATGTAGATCCCGAGGGCCCCACCTACTGTATAGGTCTTGATGTTCAATCT
TCTGGTAAAGATATGATCTATACTGTTCACGGCAACACTAAGCTGAGGAA
TTTTAAGCACAACGTTACTGACTGTGGGGTTTCTTTGACATCATTCGGCA
ACAAGAATTATGTTGGTGCAAAGCTTGAAGATAGTTTATTGGTTGGGAAA
AGACTAAAGCTAGTCATGAATGCTGGCCGAATGGGTGGTTCTGGACAAGT
GGCATATGGTGGGGNAGTTTGAAGCCATTTTTAGAGGGCGGACTACCCTG
TGCGGAATGACAATATCATTTTGANCATGACAGCTTTATCCTTTATAAAG
AGGTGGTGTTAACTGGAGGTTCCNATCTGAGTCCGGCCGATCAGGGCTTG
ATATGTCGGTAATGCCACTTA
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