EY710993

Overview
NameEY710993
Unique NameEY710993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710993 vs. ExPASy Swiss-Prot
Match: MGP_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.153e-74
Identity = 139/222 (62.61%), Postives = 163/222 (73.42%), Query Frame = 2
Query:  158 RSLPGNPDPDAEVIALSPKTLLATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLKQRSNKDIIKKKAYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGERKWKCEKCSKVYAVQSDWKAHSKTCGTREYRCDCGTLFSGRIASYTQSIL*CISRGK-------CKTLSNPLATTFNTMGHHSHCITKHSSSSL-----FPFTQPTLRSLHGTHLKPLNPN 787
            R+LPGNPDP+AEVIALSPKTL+ATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKLKQR++K++ +K+ YVCPE SCVHHHP+RALGDLTGIKKHFCRKHGE+KWKCEKC+K YAVQSDWKAHSKTCGTREYRCDCGT+FS R +  T     C +  +          L +  AT  + + +H    T   S SL     FPF  P  +  H  H  P+  N
Sbjct:   44 RNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV-RKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAF-CDALAEETARLNAASHLKSFAATAGSNLNYHYLMGTLIPSPSLPQPPSFPFGPPQPQH-HHHHQFPITTN 262          
BLAST of EY710993 vs. ExPASy Swiss-Prot
Match: JKD_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 2.458e-74
Identity = 116/140 (82.86%), Postives = 129/140 (92.14%), Query Frame = 2
Query:  158 RSLPGNPDPDAEVIALSPKTLLATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLKQRSNKDIIKKKAYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGERKWKCEKCSKVYAVQSDWKAHSKTCGTREYRCDCGTLFS 577
            R+ PG PDPDA+VIALSP TL+ATNRFVCE+CNKGFQRDQNLQLHRRGHNLPWKLKQRS +++IKKK Y+CP  +CVHH  SRALGDLTGIKKH+ RKHGE+KWKCEKCSK YAVQSDWKAH+KTCGTREY+CDCGTLFS
Sbjct:   56 RNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFS 195          

HSP 2 Score: 34.6538 bits (78), Expect = 2.458e-74
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  570 FSQGG*LHTHRAFCDALAEESARLSA 647
            FS+     THRAFCDAL EE AR+S+
Sbjct:  194 FSRKDSFITHRAFCDALTEEGARMSS 219          
BLAST of EY710993 vs. ExPASy Swiss-Prot
Match: NUC_ARATH (Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.823e-73
Identity = 145/255 (56.86%), Postives = 173/255 (67.84%), Query Frame = 2
Query:   44 SEEAASVSSGT---RVQDFGGLNLIASTISPXXXXXXXXXXRSLPGNPDPDAEVIALSPKTLLATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLKQRSNKDIIKKKAYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGERKWKCEKCSKVYAVQSDWKAHSKTCGTREYRCDCGTLFSGRIASYTQSIL*CISRGKCKTLSNPLATTFNTMGHHSHCITKHSSSSLFPFTQPTLRSLHGTHLKPLNPNVLTP 799
            SE   ++SSG+   + Q    L+   S I+P          R+LPGNPDP+AEVIALSP TL+ATNRF+CEVC KGFQRDQNLQLHRRGHNLPWKLKQR++K++ +K+ YVCPE +CVHHH SRALGDLTGIKKHFCRKHGE+KW CEKC+K YAVQSDWKAHSKTCGTREYRCDCGT+FS R +  T        R  C  L+   A   N + H +      +  S+        + L GT + PL P V  P
Sbjct:    3 SEVLQTISSGSGFAQPQSSSTLDHDESLINPPLVKKK----RNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV-RKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITH-------RAFCDALAEETA-KINAVSHLNGLAAAGAPGSV----NLNYQYLMGTFIPPLQPFVPQP 240          
BLAST of EY710993 vs. ExPASy Swiss-Prot
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.418e-17
Identity = 48/147 (32.65%), Postives = 75/147 (51.02%), Query Frame = 2
Query:  176 PDPDAEVIALSPKTLLATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLK---QRSNKDIIKK------KAYVCPEPSC---VHHHPSRALGDLTGIKKHFCRKHGERKWKCEKC-SKVYAVQSDWKAHSKTCGTREYRCDCGTLFS 577
            P    E++ L  + +LA +   C +C KGF+RD NL++H RGH   +K      + NK+ +        K Y CP   C     H   + L  +  +K H+ R H ++ + C +C +K ++V +D K H K CG  ++ C CGT FS
Sbjct:  224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFS 370          
BLAST of EY710993 vs. ExPASy Swiss-Prot
Match: TT1_ARATH (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.959e-16
Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  218 LLATNRFVCEVCNKGFQRDQNLQLHRRGHNL-----PWKLKQRSNKDIIKKKAYVCPEPSCVHH--HP-SRALGDLTGIKKHFCRKHGERKWKCEKCSKVYAVQSDWKAHSKTCGTREYRCDCGTLF 574
            L+    F C VC K F R  NLQ+H  GH       P  LK    + ++    Y C E  C +H  HP S+ L D   ++ H+ RKHG + + C  C K+ AV+ DW+ H K CG R + C CG+ F
Sbjct:  139 LIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVE-GCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKR-WVCVCGSDF 263          
The following BLAST results are available for this feature:
BLAST of EY710993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
MGP_ARATH2.153e-7462.61Zinc finger protein MAGPIE OS=Arabidopsis thaliana... [more]
JKD_ARATH2.458e-7482.86Zinc finger protein JACKDAW OS=Arabidopsis thalian... [more]
NUC_ARATH1.823e-7356.86Zinc finger protein NUTCRACKER OS=Arabidopsis thal... [more]
STOP1_ARATH1.418e-1732.65Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Ara... [more]
TT1_ARATH5.959e-1637.80Protein TRANSPARENT TESTA 1 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710993 ID=EY710993; Name=EY710993; organism=Citrus sinensis; type=EST; length=905bp
TCCTCCTGCTGCTGGTGCTGCTATATCCAATTCAACCTCTTTGTCTGAGG
AAGCTGCTAGTGTCTCCTCTGGCACTAGGGTTCAAGATTTTGGTGGCTTA
AATTTAATTGCTTCTACTATTTCTCCTCAGCAGCAATCACAAAAAGCCAA
GAAGAAGAGAAGCCTCCCTGGAAACCCAGACCCTGACGCGGAAGTGATTG
CATTATCTCCAAAGACTTTATTGGCCACCAACAGATTTGTGTGTGAGGTC
TGTAACAAAGGGTTTCAAAGAGACCAGAACCTGCAACTTCACAGGAGAGG
CCATAACCTACCATGGAAATTGAAGCAAAGGAGCAACAAAGATATCATAA
AAAAGAAAGCATATGTTTGTCCTGAGCCGTCTTGTGTTCATCACCATCCT
TCAAGAGCTCTTGGTGATCTTACAGGTATTAAGAAACACTTTTGCAGAAA
ACATGGGGAGAGGAAATGGAAGTGTGAGAAATGCTCAAAGGTCTATGCTG
TTCAATCTGATTGGAAGGCTCATTCTAAAACCTGTGGGACTAGAGAATAT
AGATGTGACTGTGGAACCCTTTTCTCAGGGAGGATAGCTTCATACACACA
GAGCATTTTGTGATGCATTAGCCGAGGAAAGTGCAAGACTCTCAGCAACC
CACTAGCCACCACATTTAACACAATGGGACACCACTCACATTGCATCACA
AAACATTCATCGTCTTCTCTCTTCCCNTTCACACAACCCACATTGCGCTC
ACTCCATGGGACCCACCTCAAACCCCTAAATCCTAACGTATTAACCCCAA
TACGACCCTCATCCAAACCCACTTATTATCAGGCTGAAATTCCCATTTTC
AAATCCACCACCGTTCTCTTCTTTAATACTTCAAGACCACAGGAAGGCAG
CAAAA
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