EY710989

Overview
NameEY710989
Unique NameEY710989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEFS (Inner membrane protein oxaA OS=Pseudomonas fluorescens (strain SBW25) GN=oxaA PE=3 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.730e-79
Identity = 148/169 (87.57%), Postives = 152/169 (89.94%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILIVALAIVSY MVLKWNQDYGQAALPTQNVATNQ+APAIPDTPLG              +TS P+ETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGER YLAQSGLTGT+GPDARATGRPVYSTEQKTYQLADGQNQL
Sbjct:    1 MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVATNQAAPAIPDTPLGNNASASADVPSANGETSAPLETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERTYLAQSGLTGTNGPDARATGRPVYSTEQKTYQLADGQNQL 169          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEPF (Inner membrane protein oxaA OS=Pseudomonas fluorescens (strain Pf0-1) GN=oxaA PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.213e-65
Identity = 122/169 (72.19%), Postives = 136/169 (80.47%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILIVALAIVSY MVLKWNQDYGQAALPTQNVA++ +   +PDT  G              DTS P ETPV  +KDLI +KTDVLDL+IDPQGGD+AQL LPLYPRRQD PDVPFQLFDNGGER YLAQSGL GT+GPDA   GRP+YS+E+KTYQLADGQ++L
Sbjct:    1 MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTTSGLPDTATGNNAAASDDIPRAASDTSAPAETPVAASKDLIQIKTDVLDLSIDPQGGDVAQLTLPLYPRRQDRPDVPFQLFDNGGERTYLAQSGLIGTNGPDANPAGRPIYSSEKKTYQLADGQDKL 169          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSESM (Inner membrane protein oxaA OS=Pseudomonas syringae pv. tomato GN=oxaA PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.681e-64
Identity = 122/171 (71.35%), Postives = 140/171 (81.87%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTST--PVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILIVALAIV+Y  VLKWNQDYGQAA+PTQNVA + +AP IPDT  G              +T++  P+ETP V +KDLIHVKTDVLDLAIDP GGD+ QL+LPLYPRRQD PDVPFQLFDNGGER +LAQSGLTGT+GPDARA+GRPVYS+ QK+YQLADGQ+ +
Sbjct:    1 MDIKRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASADVPSATGNTTSAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPFQLFDNGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQDSM 171          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEF5 (Inner membrane protein oxaA OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=oxaA PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.972e-64
Identity = 119/169 (70.41%), Postives = 136/169 (80.47%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILIVALAIVSY MVLKWNQDYGQAALPTQNVA++ +AP +PD P G               T+ P E PV  +KDLI +KTDVLDLA+DPQGGDIAQL+LPLYPRRQDHP++PFQLFDNG ER YLAQSGL G++GPDA   GRP+YS E+K+YQLADGQ+QL
Sbjct:    1 MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTAPGLPDAPTGTSAANDDIPRAASD-TTAPAEAPVAASKDLIQIKTDVLDLAVDPQGGDIAQLRLPLYPRRQDHPEIPFQLFDNGNERTYLAQSGLIGSNGPDASPAGRPIYSAEKKSYQLADGQDQL 168          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEU2 (Inner membrane protein oxaA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=oxaA PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.800e-64
Identity = 122/172 (70.93%), Postives = 137/172 (79.65%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTST---PVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILIVALAIV+Y  VLKWNQDYGQAA+PTQNVA + +AP IPDT  G                +T   P+ETP V +KDLIHVKTDVLDLAIDP GGD+ QL+LPLYPRRQD PDVPFQLFDNGGER +LAQSGLTGT+GPDARA GRPVY++ QKTYQLADGQ+ +
Sbjct:    1 MDIKRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPSANATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPFQLFDNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTM 172          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSE14 (Inner membrane protein oxaA OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=oxaA PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.800e-64
Identity = 122/172 (70.93%), Postives = 137/172 (79.65%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTST---PVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILIVALAIV+Y  VLKWNQDYGQAA+PTQNVA + +AP IPDT  G                +T   P+ETP V +KDLIHVKTDVLDLAIDP GGD+ QL+LPLYPRRQD PDVPFQLFDNGGER +LAQSGLTGT+GPDARA GRPVY++ QKTYQLADGQ+ +
Sbjct:    1 MDIKRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASADVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPDVPFQLFDNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTM 172          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEPU (Inner membrane protein oxaA OS=Pseudomonas putida GN=oxaA PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.067e-60
Identity = 120/171 (70.18%), Postives = 132/171 (77.19%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPD-TPLGXXXXXXXXXXXXXXDTSTPVE-TPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILI ALA+VSY MVLKWN DYGQAALPTQN A +  AP +PD  P G                S+P E  PV  +KDLI VKTDVL+LAIDP GGDI QL LP YPRRQDHP++PFQLFDNGGERVYLAQSGLTGTDGPDARA+GRP+Y+ EQK+YQLADGQ QL
Sbjct:    1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASADVPSANAE--SSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPFQLFDNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQL 169          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEPK (Inner membrane protein oxaA OS=Pseudomonas putida (strain KT2440) GN=oxaA PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.067e-60
Identity = 120/171 (70.18%), Postives = 132/171 (77.19%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPD-TPLGXXXXXXXXXXXXXXDTSTPVE-TPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILI ALA+VSY MVLKWN DYGQAALPTQN A +  AP +PD  P G                S+P E  PV  +KDLI VKTDVL+LAIDP GGDI QL LP YPRRQDHP++PFQLFDNGGERVYLAQSGLTGTDGPDARA+GRP+Y+ EQK+YQLADGQ QL
Sbjct:    1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASADVPSANAE--SSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPFQLFDNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQL 169          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEP1 (Inner membrane protein oxaA OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=oxaA PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.067e-60
Identity = 120/171 (70.18%), Postives = 132/171 (77.19%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPD-TPLGXXXXXXXXXXXXXXDTSTPVE-TPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILI ALA+VSY MVLKWN DYGQAALPTQN A +  AP +PD  P G                S+P E  PV  +KDLI VKTDVL+LAIDP GGDI QL LP YPRRQDHP++PFQLFDNGGERVYLAQSGLTGTDGPDARA+GRP+Y+ EQK+YQLADGQ QL
Sbjct:    1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASADVPSANAE--SSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPFQLFDNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQL 169          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEPG (Inner membrane protein oxaA OS=Pseudomonas putida (strain GB-1) GN=oxaA PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.165e-59
Identity = 119/171 (69.59%), Postives = 131/171 (76.61%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPD-TPLGXXXXXXXXXXXXXXDTSTPVE-TPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILI ALA+VSY MVLKWN DYGQAALPTQN A +  AP +PD  P G                S+P E  PV  +KDLI VKTDVL+LAIDP GGDI QL LP YPRRQDHPD+PFQLFDNGGERVYLAQSGLTG +GPDARA+GRP+Y+ EQK+YQLADGQ QL
Sbjct:    1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASADVPSANAE--SSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPFQLFDNGGERVYLAQSGLTGANGPDARASGRPLYAAEQKSYQLADGQEQL 169          
The following BLAST results are available for this feature:
BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OXAA_PSEFS1.730e-7987.57Inner membrane protein oxaA OS=Pseudomonas fluores... [more]
OXAA_PSEPF9.213e-6572.19Inner membrane protein oxaA OS=Pseudomonas fluores... [more]
OXAA_PSESM2.681e-6471.35Inner membrane protein oxaA OS=Pseudomonas syringa... [more]
OXAA_PSEF55.972e-6470.41Inner membrane protein oxaA OS=Pseudomonas fluores... [more]
OXAA_PSEU27.800e-6470.93Inner membrane protein oxaA OS=Pseudomonas syringa... [more]
OXAA_PSE147.800e-6470.93Inner membrane protein oxaA OS=Pseudomonas syringa... [more]
OXAA_PSEPU3.067e-6070.18Inner membrane protein oxaA OS=Pseudomonas putida ... [more]
OXAA_PSEPK3.067e-6070.18Inner membrane protein oxaA OS=Pseudomonas putida ... [more]
OXAA_PSEP13.067e-6070.18Inner membrane protein oxaA OS=Pseudomonas putida ... [more]
OXAA_PSEPG1.165e-5969.59Inner membrane protein oxaA OS=Pseudomonas putida ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC
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