EY710962

Overview
NameEY710962
Unique NameEY710962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710962 vs. ExPASy Swiss-Prot
Match: CRNA_EMENI (Nitrate transporter OS=Emericella nidulans GN=crnA PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.423e-27
Identity = 65/194 (33.51%), Postives = 99/194 (51.03%), Query Frame = 2 
Query:  191 RAFHLAWXXXXXXXXXXXXIPPLIPI-IRHDLNLTDTDVGTAGMASFLGSIFSRLAMGPVCDLLGPRVASATLSLITAPIVLSASLVSSPQSFILVRFLVGFCLANFVANQFWMSSMFSGCVVGLANGVSAGWANMGAGVSQLLMPLIF-TAITSLNVGTHTAWRLAFIVPSTFQALTAIMVLIYGQDLPSGNY 766
            R F  +W             PPL+ + IR DL+++ T +  + + + L ++  RL  GP+CD  GPR+    L L+ +     A LV+SPQ  I +RF +G     FV  Q W +  F   +VG AN ++AG  N G G++  +MP IF + I    +  H AWR+A+IVP       A+ +L    D P+G +
Sbjct:   34 RVFFFSWFGFMLAFLSWYAFPPLLTVTIRDDLDMSQTQIANSNIIALLATLLVRLICGPLCDRFGPRLVFIGLLLVGSIPTAMAGLVTSPQGLIALRFFIGILGGTFVPCQVWCTGFFDKSIVGTANSLAAGLGNAGGGITYFVMPAIFDSLIRDQGLPAHKAWRVAYIVPFILIVAAALGMLFTCDDTPTGKW 227
The following BLAST results are available for this feature:
BLAST of EY710962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CRNA_EMENI3.423e-2733.51Nitrate transporter OS=Emericella nidulans GN=crnA... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-B05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710962 ID=EY710962; Name=EY710962; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCATTTCCCTCTCAAAAATTAACCCAAAATAACCAAGAAA
GCAACATGGAAGAAGATCCTCCGTCTCCCCAAAAAAGATCAACATCACCA
CCAACCCCCTTCACTCTCCCCGTCGATTCCGACAAGAAAGCCACAGAGTT
CCGTCCATTCTCACCATCATCCCTCTCATCACCTCACATGCGAGCCTTCC
ACCTTGCATGGCTCTCCCTCTTTTCCTGCTTCTTCTCCACATTCTCCATC
CCTCCTCTCATCCCCATCATCCGCCACGACCTCAACCTCACCGACACCGA
CGTCGGCACCGCCGGCATGGCCTCCTTCCTGGGCTCCATCTTCTCCCGCC
TCGCCATGGGCCCCGTATGCGACCTCCTGGGCCCACGAGTGGCCTCCGCC
ACCCTCTCCCTCATCACAGCCCCCATCGTCTTATCCGCCTCCCTAGTCTC
CTCCCCGCAGTCCTTCATCCTCGTACGCTTCCTCGTAGGGTTTTGCTTGG
CCAACTTCGTGGCCAATCAGTTCTGGATGAGCTCCATGTTCTCCGGCTGC
GTCGTCGGCCTCGCCAACGGCGTCTCCGCCGGCTGGGCCAACATGGGCGC
CGGCGTGTCCCAGCTACTAATGCCGTTAATCTTCACGGCTATCACCAGCC
TCAACGTGGGAACACACACTGCATGGCGCTTAGCTTTTATAGTTCCGTCA
ACATTCCAAGCTTTAACAGCCATTATGGTTTTGATCTACGGGCAAGACTT
GCCTTCCGGGAACTACNANNGAGTCNNAGAAACAAAACTGAATCCAGAGA
GGAGAAGTTTGTGCACGTCTTTTCATGGGCTGAAGAATACAGAGGATGGG
ATCTNNGGTTACGTACGGNTCTGNTTTTGGGGTGGAGTGAGACTGATACA
TATAGCGCAGATTT
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