EY710961

Overview
NameEY710961
Unique NameEY710961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: BGL38_ORYSJ (Beta-glucosidase 38 OS=Oryza sativa subsp. japonica GN=BGLU38 PE=2 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 9.084e-13
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 2
Query:    2 DAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALL 112
            DAYRFSISWSRIFP GLG KIN +G+ +Y+ +ID +L
Sbjct:   99 DAYRFSISWSRIFPSGLG-KINKDGVDYYHRLIDYML 134          

HSP 2 Score: 39.2762 bits (90), Expect = 9.084e-13
Identity = 16/37 (43.24%), Postives = 24/37 (64.86%), Query Frame = 3
Query:  162 ILNIIVIVGIQPYVTLYHWDLPLHLHESMGGWLNKEI 272
            +++ ++   I PYV LYH+DLP  LH+   GWL+  I
Sbjct:  129 LIDYMLANNIIPYVVLYHYDLPQVLHDQYKGWLHPRI 165          
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: BGL09_ARATH (Beta-glucosidase 9 OS=Arabidopsis thaliana GN=BGLU9 PE=2 SV=2)

HSP 1 Score: 46.595 bits (109), Expect = 3.351e-12
Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 2
Query:    2 DAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGMK 127
            +++RFSISWSR+ P+G G  IN +G+ FYNN+I  L   G++
Sbjct:   92 ESFRFSISWSRLIPNGRGL-INPKGLLFYNNLIKDLKSHGIE 132          

HSP 2 Score: 46.2098 bits (108), Expect = 3.351e-12
Identity = 17/29 (58.62%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  186 GIQPYVTLYHWDLPLHLHESMGGWLNKEI 272
            GI+P+VTLYH+DLP  L +  GGW+N++I
Sbjct:  130 GIEPHVTLYHYDLPQSLEDEYGGWINRKI 158          
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: BGL42_ARATH (Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGLU42 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.785e-12
Identity = 31/46 (67.39%), Postives = 41/46 (89.13%), Query Frame = 2
Query:    5 AYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGMKQFDSL 142
            AYRFSISWSRIFPDGLGT++N EGI FYN++I+ LL+KG++ + +L
Sbjct:   90 AYRFSISWSRIFPDGLGTEVNEEGIAFYNDLINTLLEKGIQPYVTL 135          
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: BGL03_ARATH (Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 47.7506 bits (112), Expect = 1.236e-11
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 2
Query:    2 DAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGMK 127
            DA+RFSISWSR+ P+G G  +N +G+ FY N I  L+  G++
Sbjct:   91 DAFRFSISWSRLIPNGRG-PVNPKGLQFYKNFIQELVSHGIE 131          

HSP 2 Score: 43.1282 bits (100), Expect = 1.236e-11
Identity = 16/33 (48.48%), Postives = 25/33 (75.76%), Query Frame = 3
Query:  174 IVIVGIQPYVTLYHWDLPLHLHESMGGWLNKEI 272
            +V  GI+P+VTL+H+D P +L +  GGW+N+ I
Sbjct:  125 LVSHGIEPHVTLFHYDHPQYLEDEYGGWINRRI 157          
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: BGL07_ARATH (Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU7 PE=2 SV=2)

HSP 1 Score: 45.8246 bits (107), Expect = 1.237e-11
Identity = 20/42 (47.62%), Postives = 31/42 (73.81%), Query Frame = 2
Query:    2 DAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGMK 127
            +++RFSISWSR+ P+G G +IN +G+ FY N+I  L   G++
Sbjct:   93 ESFRFSISWSRLIPNGRG-RINPKGLLFYKNLIKELRSHGIE 133          

HSP 2 Score: 45.0542 bits (105), Expect = 1.237e-11
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  186 GIQPYVTLYHWDLPLHLHESMGGWLNKEI 272
            GI+P VTLYH+DLP  L +  GGW+N++I
Sbjct:  131 GIEPQVTLYHYDLPQSLEDEYGGWINRKI 159          
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: BGL08_ARATH (Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU8 PE=2 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 1.237e-11
Identity = 20/42 (47.62%), Postives = 31/42 (73.81%), Query Frame = 2
Query:    2 DAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGMK 127
            +++RFSISWSR+ P+G G +IN +G+ FY N+I  L   G++
Sbjct:   92 ESFRFSISWSRLIPNGRG-RINPKGLLFYKNLIKELRSHGIE 132          

HSP 2 Score: 45.0542 bits (105), Expect = 1.237e-11
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  186 GIQPYVTLYHWDLPLHLHESMGGWLNKEI 272
            GI+P+VTLYH+DLP  L +  GGW+N +I
Sbjct:  130 GIEPHVTLYHYDLPQSLEDEYGGWINHKI 158          
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: BGLA_PAEPO (Beta-glucosidase A OS=Paenibacillus polymyxa GN=bglA PE=1 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 2.715e-11
Identity = 21/45 (46.67%), Postives = 33/45 (73.33%), Query Frame = 2
Query:    8 YRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGMKQFDSL 142
            YRFS+SW RIFP+G G ++N EG+ +Y+ ++D L   G++ F +L
Sbjct:   76 YRFSVSWPRIFPNGDG-EVNQEGLDYYHRVVDLLNDNGIEPFCTL 119          

HSP 2 Score: 39.6614 bits (91), Expect = 2.715e-11
Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = 3
Query:  186 GIQPYVTLYHWDLPLHLHESMGGWLNK 266
            GI+P+ TLYHWDLP  L ++ GGW N+
Sbjct:  112 GIEPFCTLYHWDLPQALQDA-GGWGNR 137          
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: BGL03_ORYSJ (Beta-glucosidase 3 OS=Oryza sativa subsp. japonica GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 3.511e-11
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 2
Query:    2 DAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGMK 127
            +AYRFSISWSR+ P G G  +N +G+ +YNNIID L ++G++
Sbjct:   96 EAYRFSISWSRLIPSGRGA-VNQQGLKYYNNIIDELTKRGIQ 136          

HSP 2 Score: 34.6538 bits (78), Expect = 3.511e-11
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 3
Query:  186 GIQPYVTLYHWDLPLHLHESMGGWLNKEI 272
            GIQ +V LYH DLP  L +   GWL+  I
Sbjct:  134 GIQVHVMLYHLDLPQALEDEYAGWLSPRI 162          
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: LPH_RAT (Lactase-phlorizin hydrolase OS=Rattus norvegicus GN=Lct PE=2 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 4.394e-11
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 2
Query:    8 YRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGM 124
            YRFSI+WSRI PDG    IN  G+++Y   IDALL  G+
Sbjct: 1448 YRFSIAWSRILPDGTTKFINEAGLSYYVRFIDALLAAGI 1486          

HSP 2 Score: 40.817 bits (94), Expect = 4.394e-11
Identity = 17/36 (47.22%), Postives = 25/36 (69.44%), Query Frame = 3
Query:  165 LNIIVIVGIQPYVTLYHWDLPLHLHESMGGWLNKEI 272
            ++ ++  GI P VT+YHWDLP  L + +GGW N+ I
Sbjct: 1478 IDALLAAGITPQVTIYHWDLPQAL-QDVGGWENETI 1512          
BLAST of EY710961 vs. ExPASy Swiss-Prot
Match: LPH_RABIT (Lactase-phlorizin hydrolase OS=Oryctolagus cuniculus GN=LCT PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 5.702e-11
Identity = 25/53 (47.17%), Postives = 31/53 (58.49%), Query Frame = 2
Query:    5 AYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGMKQFDSLPVAAAIH 163
            AYRFS+SWSRIFP G  + IN  G+ +YN +ID LL       D  P+    H
Sbjct:  971 AYRFSLSWSRIFPTGTNSSINSHGVDYYNRLIDGLLAS-----DIFPMVTLFH 1018          

HSP 2 Score: 34.2686 bits (77), Expect = 5.702e-11
Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = 3
Query:  189 IQPYVTLYHWDLPLHLHESMGGWLNKEI 272
            I P VTL+HWDLP  L + +GGW N  +
Sbjct: 1010 IFPMVTLFHWDLPQAL-QDIGGWENPSL 1036          
The following BLAST results are available for this feature:
BLAST of EY710961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
BGL38_ORYSJ9.084e-1367.57Beta-glucosidase 38 OS=Oryza sativa subsp. japonic... [more]
BGL09_ARATH3.351e-1250.00Beta-glucosidase 9 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL42_ARATH3.785e-1267.39Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGL... [more]
BGL03_ARATH1.236e-1150.00Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL07_ARATH1.237e-1147.62Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL08_ARATH1.237e-1147.62Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU... [more]
BGLA_PAEPO2.715e-1146.67Beta-glucosidase A OS=Paenibacillus polymyxa GN=bg... [more]
BGL03_ORYSJ3.511e-1154.76Beta-glucosidase 3 OS=Oryza sativa subsp. japonica... [more]
LPH_RAT4.394e-1156.41Lactase-phlorizin hydrolase OS=Rattus norvegicus G... [more]
LPH_RABIT5.702e-1147.17Lactase-phlorizin hydrolase OS=Oryctolagus cunicul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710961 ID=EY710961; Name=EY710961; organism=Citrus sinensis; type=EST; length=743bp
TGATGCTTATAGGTTTTCCATATCATGGTCTCGCATCTTCCCTGATGGTT
TAGGAACCAAAATAAACATGGAAGGGATCACTTTCTACAACAATATCATT
GATGCTCTTCTTCAAAAGGGTATGAAACAATTTGATTCCCTTCCAGTTGC
AGCGGCTATACATATTAAATATCATTGTTATTGTAGGTATTCAGCCTTAT
GTAACATTGTACCATTGGGATCTTCCTTTGCATCTTCATGAGTCAATGGG
TGGGTGGTTAAATAAGGAAATAGTGTAAGTATTATGCCATCATTAAATTC
TCCAGTTGCAAATACTTTGATTCTACAATTTTTTTTTTTTTTTTAAAATT
TCAGCTCCTTTTCATATAACAAAATGAGTCATTTATTACTTGTCTTGTAA
TCAATTTCTATCATGGCCTTTTTGGGGGTGAGAATTTAGTAATCCATTGT
AATTTATGGTATTGTGTGACCCACAACTCTCTGTCTCAATTATCGATGAN
GAAAAGTCCCTTGCTAATTTTATTTATANGTTTGGTGCCCTATAGATTTC
ATATGNTAACACCCCATATGAATCCATTNNATACTATNATGATCCNTGNN
GCTTATGNCTGGAAATCTCCAGAAATATTTGAATTTATGCAGATACTGCT
TTCAGTTTTGCGATGAGTAAGAATGGATACATAATGAGCCCTCAACTGCG
GTAATGGGATTGACTGGGAATTTGCCCTGNAGACTCACATTCT
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