EY710953

Overview
NameEY710953
Unique NameEY710953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710953 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.362e-25
Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = 1
Query:  220 ARASRFSQCALLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPTVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPTLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRL-SSLEILNMSSNFLNGSVPXEXXXXXXXXXXXXDENMLAGRVPDWLG 744
            +++  FS   LL L ++L  V+ S QL SS+++TLL IQ  L  P  L SW+  T FC    + S  ++C+   +T+L + GN R   LP  FS DS  T L KL +LK L LVSLG+ GPL  +I RL SSL+ LN+SSNF++G++P E              N+  G VPD  G
Sbjct:    5 SKSQAFSLTFLLFL-FLLPSVSES-QLISSESRTLLEIQKHLQYPPTLRSWSNWTNFCYLPSSPSFKILCFNGHVTELTVTGN-RTVKLPGRFSSDSLFTVLTKLSNLKTLSLVSLGISGPLPSQIIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVPDLRG 177          
BLAST of EY710953 vs. ExPASy Swiss-Prot
Match: Y2278_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.410e-24
Identity = 74/175 (42.29%), Postives = 95/175 (54.29%), Query Frame = 1
Query:  256 VLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPTVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPTLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGK-ISRLS-SLEILNMSSNFLNGSVPXEXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSL 774
            +L   LL V    Q+ SS++QTLL IQ  L  P VL SW  TT FC+  P+ SL ++C    +T+L + GN+   T  LS S     T L +L  LK L L SLG+ G LS K I++LS SLE LN+SSNF++G +P E             +NM  G V D L  L  L  L L
Sbjct:   15 LLLIFLLPVLSESQVASSESQTLLEIQKQLQYPQVLQSWTDTTNFCHIRPSPSLRIICLHGHVTELTVTGNR---TSKLSGSFHKLFTLLTQLSSLKTLSLTSLGISGSLSPKIITKLSPSLESLNLSSNFISGKIPEEIVSLKNLKSLVLRDNMFWGFVSDDLRGLSNLQELDL 186          
The following BLAST results are available for this feature:
BLAST of EY710953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1143_ARATH2.362e-2542.05Probable LRR receptor-like serine/threonine-protei... [more]
Y2278_ARATH3.410e-2442.29Probable LRR receptor-like serine/threonine-protei... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-A08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710953 ID=EY710953; Name=EY710953; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGGATCCTTTAGAAGTTTTTAGTTATGATAATGTCGATTGA
TAAATTATCTGTAATTTGTATAATATTTGCAGAGTTTCTGTTGATCTTGG
GAGCTGGCGCTTCTGTAATTGAGAAGCTAGAGGCATCACTCTGTTATCCC
AGCGGATTTTTAAAAGCTCTAGAATCCCTTTGTGATTTTCTCTAGTGTTC
CTTTTTGTATGCATTGATGGCAAGAGCATCCAGATTCAGTCAGTGTGCAC
TTCTGGTGCTTGCTTACATTTTGCTTCAGGTCAATCATTCGGAGCAACTG
CAGTCTTCCCAGGCTCAGACCCTTTTGAGGATTCAAGGGCTTTTAAACAA
TCCAACTGTTTTAAGCAGCTGGAATATCACCACTGAGTTCTGCAATACAG
AACCAACCTCGTCTTTAACTGTAGTATGCTACGAAGAGAGCATAACCCAG
CTGCATATAGTCGGCAACAAGAGAGCTCCTACGTTGCCTCTAAGCTTTTC
CATGGATTCCTTTGTGACGACTCTTGTTAAGCTTCCGGACTTGAAAGTCC
TCAGGCTGGTTTCTCTAGGTCTATGGGGTCCCTTGTCTGGTAAAATTTCA
CGTTTATCGTCACTGGAAATACTTAATATGAGCTCAAATTTCCTGAATGG
TTCTGTACCTCANGAGCTTTCAATTTTAACTAGCCTTCAAACACTCATAC
TTGATGAAAACATGCTTGCTGGTCGGGTTCCAGATTGGTTGGGTTCATTA
CCGATTTTGGCTGTTTTGAGCTTGAGGAATATATGNNTCATGGGACTTTG
CCTGATTNNCGTTAGTACTGGNAGAAATCTTAGAGTCTTTGCGCTTCAAA
CATCACTTTACGGAGAAGTTCTGACTTCATGGGTTGACTTAC
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