EY710943

Overview
NameEY710943
Unique NameEY710943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: TRPG_PSEPU (Anthranilate synthase component II OS=Pseudomonas putida GN=trpG PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.972e-30
Identity = 67/102 (65.69%), Postives = 76/102 (74.51%), Query Frame = -2
Query:  159 MLLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRARPVXPG 464
            +L+MID YDSF Y VVQ LGELGAEV+V+RNDE   A + A +P R VVSPGPC+PSEAG S+ A+  FAG LP LGVCLG  S G AFGG VVRAR V  G
Sbjct:    2 LLMMIDNYDSFTYNVVQYLGELGAEVKVIRNDEMTIAQIEALNPERIVVSPGPCTPSEAGVSIEAILHFAGKLPILGVCLGHQSIGQAFGGDVVRARQVMHG 103          
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: TRPG_PSEAE (Anthranilate synthase component II OS=Pseudomonas aeruginosa GN=trpG PE=4 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.846e-28
Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = -2
Query:  159 MLLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRARPVXPG 464
            MLLMID YDSF Y +VQ  GEL AEV+VVRNDE     + A +P R V+SPGPC+P+EAG SL  +  FAG LP LGVCLG  S G AFGG VVRAR V  G
Sbjct:    1 MLLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAGVSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRARQVMHG 102          
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: TRPG_ACIAD (Anthranilate synthase component 2 OS=Acinetobacter sp. (strain ADP1) GN=trpG PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.727e-26
Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = -2
Query:  159 MLLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRARPVXPG 464
            MLLMID YDSF Y +VQ  GEL  +V+VVRND+     +  W P   VV PGPCSP+EAG S+ A+  FAG +P LGVCLG  + G AFGG ++RA+ V  G
Sbjct:    1 MLLMIDNYDSFTYNIVQYFGELNQDVKVVRNDQVTLEDIERWQPKYLVVGPGPCSPTEAGISIPAIHHFAGRIPLLGVCLGHQAIGQAFGGNIIRAKTVMHG 102          
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: PABA_SERMA (Para-aminobenzoate synthase glutamine amidotransferase component II OS=Serratia marcescens GN=pabA PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.255e-25
Identity = 58/102 (56.86%), Postives = 68/102 (66.67%), Query Frame = -2
Query:  159 MLLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRARPVXPG 464
            MLL+ID YDSF Y + Q   ELGAEV V RNDE     +   +P   V+SPGPC+P+EAG S+ A+R FAG LP LGVCLG  + G AFG  VVRAR V  G
Sbjct:    1 MLLLIDNYDSFTYNLYQYFCELGAEVVVKRNDELQLTDIERLAPQHLVISPGPCTPNEAGISVAAIRHFAGKLPILGVCLGHQALGQAFGAEVVRARAVMHG 102          
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: PABA_BACSU (Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II OS=Bacillus subtilis GN=pabA PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.788e-23
Identity = 55/102 (53.92%), Postives = 66/102 (64.71%), Query Frame = -2
Query:  159 MLLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRARPVXPG 464
            M+LMID YDSF Y +VQ LGELG E+ V RND      +   SP+  ++SPGPCSP EAG SL A++ FAG +P  GVCLG  S    FGG VVRA  +  G
Sbjct:    1 MILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIDEIEELSPDFLMISPGPCSPDEAGISLEAIKHFAGKIPIFGVCLGHQSIAQVFGGDVVRAERLMHG 102          
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: PABA_SALTY (Para-aminobenzoate synthase glutamine amidotransferase component II OS=Salmonella typhimurium GN=pabA PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.793e-23
Identity = 53/102 (51.96%), Postives = 68/102 (66.67%), Query Frame = -2
Query:  159 MLLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRARPVXPG 464
            M+L+ID YDSF + + Q   ELGAEVQV RND    A + A +P + V+SPGPC+P++AG SL  +R +AG +P LGVCLG  +   AFG  VVRA  V  G
Sbjct:    1 MILLIDNYDSFTWNLYQYFCELGAEVQVRRNDALTLAHIDALNPQKIVISPGPCTPNDAGISLAVIRHYAGRIPMLGVCLGHQAMAQAFGASVVRAAKVMHG 102          
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: PABA_ECOLI (Para-aminobenzoate synthase glutamine amidotransferase component II OS=Escherichia coli (strain K12) GN=pabA PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.793e-23
Identity = 54/102 (52.94%), Postives = 66/102 (64.71%), Query Frame = -2
Query:  159 MLLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRARPVXPG 464
            M+L+ID YDSF + + Q   ELGA+V V RND    A + A  P + V+SPGPC+P EAG SL  +R +AG LP LGVCLG  +   AFGG VVRA  V  G
Sbjct:    1 MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG 102          
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: PABA_KLEAE (Para-aminobenzoate synthase glutamine amidotransferase component II OS=Klebsiella aerogenes GN=pabA PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.510e-22
Identity = 51/102 (50.00%), Postives = 66/102 (64.71%), Query Frame = -2
Query:  159 MLLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRARPVXPG 464
            M+L+ID YDSF + + Q   ELGAEV V RNDE   A + + +P + V+SPGPC+P E+G SL A+R F+G  P LGVCLG  +    FG  +VRA  V  G
Sbjct:    1 MILLIDNYDSFTWNLYQYFCELGAEVLVRRNDELTLADIISLAPAKIVISPGPCTPDESGISLAAIRHFSGQTPILGVCLGHQAIAQVFGAAIVRAAKVMHG 102          
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: TRPG_THET8 (Anthranilate synthase component II OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpG PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 51/95 (53.68%), Postives = 64/95 (67.37%), Query Frame = -2
Query:  177 LLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRA 461
            +L++D YDSF Y +VQ LGELGAE  V RND F    + A  P+R ++SPGPC+P EAG S+  V+ +A   P LGVCLG  + G AFGG VV A
Sbjct:   14 VLVVDNYDSFTYNLVQYLGELGAEPIVWRNDRFRLEEVEALDPDRILISPGPCTPFEAGLSVPLVQRYAPRYPILGVCLGHQAIGAAFGGKVVPA 108          
BLAST of EY710943 vs. ExPASy Swiss-Prot
Match: TRPG_PORYE (Anthranilate synthase component II OS=Porphyra yezoensis GN=trpG PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.566e-19
Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = -2
Query:  159 MLLMIDTYDSFPYTVVQSLGELGAEVQVVRNDEFPPAPLAAWSPNRFVVSPGPCSPSEAGXSLGAVRXFAGGLPFLGVCLGXXSXGXAFGGXVVRARPVXPG 464
            M+L+ID YDSF Y + Q +GELG +V V RNDE     +   +PN+ ++SPGP  PS++G SL  +  F+  +P LGVCLG  S G   GG +++   +  G
Sbjct:    1 MILIIDNYDSFTYNLAQCVGELGYDVLVCRNDEIDIPTIKQLNPNKIIISPGPGKPSDSGISLDVISSFSDSIPILGVCLGHQSIGYLNGGRIIKVSEIMHG 102          
The following BLAST results are available for this feature:
BLAST of EY710943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
TRPG_PSEPU1.972e-3065.69Anthranilate synthase component II OS=Pseudomonas ... [more]
TRPG_PSEAE1.846e-2862.75Anthranilate synthase component II OS=Pseudomonas ... [more]
TRPG_ACIAD1.727e-2654.90Anthranilate synthase component 2 OS=Acinetobacter... [more]
PABA_SERMA4.255e-2556.86Para-aminobenzoate synthase glutamine amidotransfe... [more]
PABA_BACSU1.788e-2353.92Para-aminobenzoate/anthranilate synthase glutamine... [more]
PABA_SALTY6.793e-2351.96Para-aminobenzoate synthase glutamine amidotransfe... [more]
PABA_ECOLI6.793e-2352.94Para-aminobenzoate synthase glutamine amidotransfe... [more]
PABA_KLEAE7.510e-2250.00Para-aminobenzoate synthase glutamine amidotransfe... [more]
TRPG_THET86.358e-2153.68Anthranilate synthase component II OS=Thermus ther... [more]
TRPG_PORYE1.566e-1943.14Anthranilate synthase component II OS=Porphyra yez... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-H09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710943 ID=EY710943; Name=EY710943; organism=Citrus sinensis; type=EST; length=930bp
CCTCCACACGGAGCCGNCNCCAGNNGGGTCACGCCAACAGGTTTGGCATN
CGGGCAGGGNNNCACGCNGGACCACCAGCGAGTTTTAACAANNAACNGGG
TTGGGAGGNNCAAACCGNGGAACACGCCCGGGGCCGGGGGGAACACCGGG
CGGGNCNNGCCGGGCANCACCGGGCGGGCGCGCACNACGNCGCCGCCGAA
GGCCNGGCCGANGGACNGANGGCCCAGGCACACGCCCAGGAACGGCAGNC
CGCCGGCAAAGNACCGGACGGCNCCGAGGGAGANGCCCGCTTCGGACGGG
GAGCACGGGCCAGGGGAGACGACGAAGCGGTTTGGGCTCCACGCGGCGAG
GGGGGCGGGGGGGAATTCGTCGTTGCGCACTACCTGGACCTCGGCGCCGA
GCTCGCCCAGGGACTGCACAACGGTGTAGGGAAAGGAGTCGTAGGTATCA
ATCATCAGCAACATGGGGGTGAAAACCTCGGGAATTCAGTGACCTCTAAG
GACGGGCTTCCAAGGGAGTGACCCCGCGCCAGACGCACTTTCCCGGCGGC
GGGGGGTGGCCGGGAAGGGGCGCCGAACCAAGGGGGGAAAAGGGAATCGG
GACAAGTCCCGGGGGGCCGGGCAGAAAAAAGAAGGGGGCGGCGACGGCAG
CGGGCGAGGGCCCGGACAGACGCATCAAAAGGCGGCGGATGACCAACACG
GGGAGGGCGCAAGGCAGCGGGCAGGGCGAGGAAGCGACCCCGCGCAGCGG
GGCAAATGGCGACGGCCAAAAGGGGAGGAAGGGCCGACCGAAGGGGGGGG
AGGGAGTGACGACCCGAGACAAGGAGAGAAAACACGGGGTGGAAAAAAAA
ACAGCGCGGGGGGACGGCGAGGCAAGCCGCGATTGGCGCACGAGCGGGGG
GGGCGAGCAGGGGGGGGTCCAACGGCAGCG
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