EY710940

Overview
NameEY710940
Unique NameEY710940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710940 vs. ExPASy Swiss-Prot
Match: SIZ1_ARATH (E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.212e-58
Identity = 123/207 (59.42%), Postives = 144/207 (69.57%), Query Frame = 1
Query:    4 RVRIGDLASWHFPDGSLCAPAGGEDKPKVEMLKHVKQEGVSEGHIGLKLGIRKNRNGLWEVSKPEDMNGSSGSRLQEKFENHDLKVIPMSSSATGSGRDGEDASVNQDVGGTFDFTNNGIEHDSMSLNVDPTYAFADRNPCAPVGNAEVIVLSDSEDENDLFISSENIYRDNRNDVGGVSFSVPSAGIANSYPEDPAIGAGGDSCLG 624
            R  +G+L+ WH PDGSLC P+  + K K+EML  VKQEG S+G   LKLGIRKNRNG+WEVSKP + NG S S  QEK    +  +IPMSSSATGSGRDG+DASVNQD  GTFDF  NG+E DS+S+NVD  Y F DRN     GN EVIVLSDS+DENDL I+    Y   + D GG++F +   GI NSY EDP   AGG S LG
Sbjct:  455 RRELGELSQWHAPDGSLC-PSAVDIKRKMEMLP-VKQEGYSDGPAPLKLGIRKNRNGIWEVSKP-NTNGLSSSNRQEKVGYQEKNIIPMSSSATGSGRDGDDASVNQDAIGTFDFVANGMELDSISMNVDSGYNFPDRNQSGEGGNNEVIVLSDSDDENDLVITPGPAYSGCQTD-GGLTFPLNPPGIINSYNEDPHSIAGGSSGLG 657          

HSP 2 Score: 30.0314 bits (66), Expect = 1.212e-58
Identity = 15/31 (48.39%), Postives = 18/31 (58.06%), Query Frame = 2
Query:  698 FQLFSPDVDVPNGFMDLQHGS-INCSTPMMG 787
            FQLF  D DV  G + L H S +NCS  + G
Sbjct:  682 FQLFRSDADVSGGLVGLHHHSPLNCSPEING 712          
BLAST of EY710940 vs. ExPASy Swiss-Prot
Match: SIZ1_ORYSJ (E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica GN=SIZ1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.744e-26
Identity = 86/214 (40.19%), Postives = 112/214 (52.34%), Query Frame = 1
Query:   19 DLASWHFPDGSLCAPAGGED-KPKVEMLKHVKQEGVSEGHIGLKLGIRKNRNGLWEVSKPEDMNGSS--GSRLQEKFENHDL-KVIPMSSSATGSGRDGEDASVNQDVGGTFDFT-NNG-IEHDSMSLNVDPTYAFADRNPCAPVGNAEVIVLSDSEDENDLFISSENIYRDNRNDVGGVSFSVPSAGI--ANSYPEDPAIGAGGDSCLGYLAS 636
            +L+ WH PDG+LC P   ED KP ++       EG S+G   LK+GI++N NG+WEVS   D    S  G+R+Q       L  ++ MS+S T S RDGED SVNQ+     D + NNG  E DS SLN        DR P       +VIVLSDS++END  +    +Y DN     G  F   + GI     Y ED  +G  G   LG L++
Sbjct:  456 ELSQWHMPDGTLCNPK--EDVKPAMQNGNEQMMEGTSDGQKSLKIGIKRNPNGIWEVSSKADDKKPSVVGNRMQNNSGFRALNNIMHMSNSPTSSYRDGEDPSVNQESNRHVDLSLNNGNNEFDSFSLNFGQACNTDDR-PQQQHNATDVIVLSDSDEENDAMVCPPAVY-DNTTTANGSGFPFTTNGIGYTERYQEDAGVGTSG---LGLLSN 662          
BLAST of EY710940 vs. ExPASy Swiss-Prot
Match: SIZ2_ORYSJ (E3 SUMO-protein ligase SIZ2 OS=Oryza sativa subsp. japonica GN=SIZ2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.991e-16
Identity = 64/201 (31.84%), Postives = 99/201 (49.25%), Query Frame = 1
Query:   22 LASWHFPDGSLCAPAGGEDKPKVEMLK-HVKQEGVSEGHIG-LKLGIRKNRNGLWEVSKPEDMNGSSGSRLQEKFENHDLKVIPMSSSATGSGRDGEDASVNQDVGGTFDFTNNGIEHDSMSLNVDPTYAFADRNPCAPVGNAEVIVLSDSEDENDLFISSENIYRDNRNDVGGVSFSVP--SAGIANSYPEDPAIGAGGD 612
            LA WH PDG+LC P     KP + ++K  +K+E +SE   G LKLGIR+N NG WE++K  D N      +++  EN       + S++     + ++   N + G     T+N  + DS  ++           P AP    +VIVLSDS+D+N + +S  ++   + +D G      P  ++GI    P     GAG D
Sbjct:  467 LAQWHLPDGTLCMPTDTRSKPNIRIVKQEIKEEPLSEETGGRLKLGIRRNNNGQWEINKRLDSNNGQNGYIED--EN------CVVSASNTDDENSKNGIYNPEPGQFDQLTSNIYDLDSSPMDA--------HFPPAPT-EQDVIVLSDSDDDNVMVLSPGDVNFSSAHDNGNAFPPNPPEASGICGEQPR----GAGPD 646          
The following BLAST results are available for this feature:
BLAST of EY710940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SIZ1_ARATH1.212e-5859.42E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thalian... [more]
SIZ1_ORYSJ3.744e-2640.19E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp.... [more]
SIZ2_ORYSJ5.991e-1631.84E3 SUMO-protein ligase SIZ2 OS=Oryza sativa subsp.... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-H06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710940 ID=EY710940; Name=EY710940; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGAATTGGAGATTTAGCGTCCTGGCACTTTCCTGATGGTTC
TCTCTGTGCTCCTGCTGGCGGGGAGGATAAACCAAAAGTGGAAATGTTGA
AGCATGTTAAGCAGGAAGGTGTTTCAGAAGGTCATATTGGTTTGAAACTT
GGAATCAGGAAGAATCGCAACGGGCTGTGGGAAGTTAGCAAACCTGAAGA
CATGAATGGCTCTTCTGGTAGTAGATTACAGGAGAAGTTTGAAAATCATG
ATCTGAAAGTCATCCCAATGAGCAGCAGCGCTACTGGAAGTGGTAGGGAT
GGTGAAGATGCAAGTGTAAATCAGGATGTTGGTGGAACCTTCGATTTCAC
CAACAATGGAATAGAGCATGATTCTATGTCTTTGAATGTTGACCCGACGT
ATGCATTTGCTGACAGAAATCCATGTGCACCGGTTGGCAATGCAGAAGTT
ATTGTTCTTAGTGATTCTGAAGATGAGAATGACCTCTTCATATCTTCTGA
AAACATATATAGGGACAACCGAAATGATGTCGGTGGGGTTTCTTTTTCTG
TGCCCTCTGCGGGAATTGCCAATTCCTACCCTGAAGATCCTGCTATTGGT
GCTGGGGGGGACTCGTGCTTGGGTTATCTTGCTTCCATGACAATGATTTT
GGAATGCCTCTTTGGGCCTTACCATCTGGGAACTCAGGAGGGCCAGNTTC
CAGCTGTTTAGCCCGGATGTAGATGTCCCAAATGGCTTTATGGATTTGCA
GCACGGCTCTATCAACTGTTCAACTCCAATGATGGGTATACCTTGGCTCC
GATACTTCAATGGGTCTGCATCTTTAGCCCAAGNTGTACTGTTGAGCTGC
TGCAATATGAATGATCCTTAGGGGAAATCCTTTGGCTTTGCCGGGAAACC
CTTTCTTC
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