EY710939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 3.356e-38 Identity = 84/129 (65.12%), Postives = 93/129 (72.09%), Query Frame = 3 Query: 105 SPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKLPGNEELNAGKPDGEVVVNTDDRAS 491 SPQESQSRQIRSCTKVHMQG AVGRA+DLTR +CYEDL KKLEEMFDI+G+L STKKWQVVY W++FC VRKIFIYT EEVKKLSPK KL N + K D E NT+ R+S Sbjct: 532 SPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQL-KADAEENGNTEGRSS 659
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.393e-30 Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 90 SSERVSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKLP--GNEELNAGKPDGEVVVNTDDRASI 494 SSER SP ESQSRQ+RSCTKV MQG+AVGRAVDLT+ + Y DL KLEEMFDI+GDLC + K+WQVVY W +FCS V++I+IY+ EE K L+PK KLP G+ + V+ D+ AS+ Sbjct: 533 SSER-SPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVIGDTIKLSSMNSSHESVDLDNHASV 668
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.847e-29 Identity = 65/111 (58.56%), Postives = 79/111 (71.17%), Query Frame = 3 Query: 90 SSERVSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKLP 422 +S SP E+QSRQ+RSCTKV MQG+AVGRAVDLTR Y+DL KLEEMFDI+G+L S KKW+VVY W +FCS V++I+IYT EE K+L+PK KLP Sbjct: 533 ASSEPSPHETQSRQVRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPKSKLP 643
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFX_ORYSJ (Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.371e-22 Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 3 Query: 114 ESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSP 407 + Q+ RSC KVH QGIA+GR++DLT+F CY++L+ +L++MFD G+L S+K W VVY W++FC+ V KIFIYT EEV+K++P Sbjct: 706 KQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNP 803
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.281e-21 Identity = 47/107 (43.93%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 114 ESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKLPGNEE 434 ++Q RSCTKVH QG+A+GR+VDL++F Y++L +L++MF+ +G+L S K WQ+VY W +FCS VRKI+IYT EEV+K++ K P ++ Sbjct: 685 KTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAPRKDD 791
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.868e-21 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 114 ESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKLPGNEELNA 443 +SQ RSC KVH QGIA+GR+VDLT+F+ YE+L+ +L++MFD G+L G K+W VVY W +FC V KIFIYT EEV++++P +E+ +A Sbjct: 718 KSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSHA 827
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSI (Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.868e-21 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 114 ESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKLPGNEELNA 443 +SQ RSC KVH QGIA+GR+VDLT+F+ YE+L+ +L++MFD G+L G K+W VVY W +FC V KIFIYT EEV++++P +E+ +A Sbjct: 718 KSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSHA 827
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 7.030e-20 Identity = 46/102 (45.10%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 108 PQESQSR--QIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSP 407 P+++Q++ RSCTKVH QGIA+GR+VDL++F YE+L+ +L+ +F+ G+L K W +VY W +FC VRKIFIYT EEV+K++P Sbjct: 722 PKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP 823
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.857e-18 Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 111 QESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKLPGNEE 434 ++ + + RS TKV MQGIAVGRAVDLT Y++L+ +LEEMF+I+G L + KW VV+ W++FC +KIFIY+++EVKK++ K+K+ + E Sbjct: 481 EQKKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL-ARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISSSLE 587
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.265e-17 Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 3 Query: 66 SFCKLWIXSSERVSP-QESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVK 395 S CKL+ S +P + QS R CTKVH QG VGRA+DL+R + Y+DLL +LE +F++EG L K W+++Y WHDFC+ V KI +YT EEV+ Sbjct: 641 SGCKLFGFSLPVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVE 751 The following BLAST results are available for this feature:
BLAST of EY710939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710939 ID=EY710939; Name=EY710939; organism=Citrus sinensis; type=EST; length=929bpback to top |