EY710936

Overview
NameEY710936
Unique NameEY710936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3)

HSP 1 Score: 266.929 bits (681), Expect = 1.196e-70
Identity = 140/204 (68.63%), Postives = 144/204 (70.59%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            + T PGKGDIPTYVVGVN  A   DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLV+QVSKKTFAEEVNAAFR+SA+ ELKGIL VCDEPLVSVDFRC              MG  MVKVIAWYDNEWGYSQR
Sbjct:  180 IITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQR 383          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 7.754e-70
Identity = 140/204 (68.63%), Postives = 143/204 (70.10%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGKGDIPTYVVGVN       + IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLV+QVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC              MG  MVKVIAWYDNEWGYSQR
Sbjct:  185 LITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQR 388          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 2.256e-69
Identity = 138/204 (67.65%), Postives = 141/204 (69.12%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGKGDIPTYVVGVN     PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ                  NIVPTST                   + LRVPTPNVSVVDLV+QVSKKTFAEEVNAAFRE+AD ELKGIL VCDEPLVSVDFRC              MG  MVKVIAWYDNEWGYSQR
Sbjct:  176 LITAPGKGDIPTYVVGVNADLYNPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALSSQALRGSSMALPLRVPTPNVSVVDLVVQVSKKTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQR 379          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.494e-68
Identity = 136/204 (66.67%), Postives = 142/204 (69.61%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGKGDIPTYVVGVN      ++ IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLV+QVSKKTFAEEVNAAFR++A+ ELKGIL VCDEPLVSVDFRC              MG  MVKVIAWYDNEWGYSQR
Sbjct:   17 LITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQR 220          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 4.255e-68
Identity = 136/204 (66.67%), Postives = 140/204 (68.63%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGKGDIPTYVVGVN     PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLV+QVSKKT AEEVN AFR++A NEL GIL VCD PLVSVDFRC              MG  MVKVI+WYDNEWGYSQR
Sbjct:  187 LITAPGKGDIPTYVVGVNADQYNPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELTGILEVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVISWYDNEWGYSQR 390          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 2.758e-67
Identity = 137/204 (67.16%), Postives = 140/204 (68.63%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGKGDIPTYVVGVN  A    + IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLV+QVSKKTFAEEVN AFRESA  EL GILSVCDEPLVSVDFRC              MG  +VKVIAWYDNEWGYSQR
Sbjct:  189 LITAPGKGDIPTYVVGVNADAYTHADDIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRESAAKELTGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDLVKVIAWYDNEWGYSQR 392          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 9.500e-60
Identity = 123/205 (60.00%), Postives = 136/205 (66.34%), Query Frame = 1
Query:   25 LTTEPGKG-DIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T P K  DIPT+VVGVN    K + PIISNASCTTNCLAPFVKVL+QKFGI+KGTMTTTHSYTGDQ                  NIVPT+T                 NGIALRVPTP VSVVDLV+QV KKTFAEEVNAAFRE+A+  +KG+L V D PLVS+DF+C              MG  MVKV+AWYDNEWGYSQR
Sbjct:  156 LITAPAKDKDIPTFVVGVNEGDYKHEYPIISNASCTTNCLAPFVKVLEQKFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPTPTVSVVDLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDMVKVVAWYDNEWGYSQR 360          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.792e-58
Identity = 120/201 (59.70%), Postives = 131/201 (65.17%), Query Frame = 1
Query:   25 LTTEPGKG-DIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWG 624
            L T P KG DIPTYVVGVN    K  + IISNASCTTNCLAPFVKVLD+KFGI+KGTMT THSYTGDQ                  NIVPT+T                 NGIALRVPTPNVSVVDLV+QV KKTFAEE+N AF+E+A   L G+L+V DEPLVSVDFRC              MG  MVKV+AWYDNEWG
Sbjct:  114 LITAPAKGSDIPTYVVGVNAHDYKHSDAIISNASCTTNCLAPFVKVLDEKFGIVKGTMTNTHSYTGDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVALVLPKLKGKLNGIALRVPTPNVSVVDLVVQVEKKTFAEEINNAFKEAAAGSLNGVLAVSDEPLVSVDFRCTDVSSTIDSSLTMVMGADMVKVVAWYDNEWG 314          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.981e-57
Identity = 122/207 (58.94%), Postives = 136/207 (65.70%), Query Frame = 1
Query:   25 LTTEPGKG-DIPTYVVGVNVVAPKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            + T P KG DIPTYVVGVN      +   IISNASCTTNCLAPFVKV+D++ GI+KGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLV+ V+KK   AE+VNAAFR++AD  LKG+L+VCDEPLVSVDFRC              MG  MVKV+AWYDNEWGYSQR
Sbjct:  173 IITAPAKGADIPTYVVGVNEQDYSHEVADIISNASCTTNCLAPFVKVMDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGITAEDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQR 379          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.861e-56
Identity = 121/207 (58.45%), Postives = 134/207 (64.73%), Query Frame = 1
Query:   25 LTTEPGKG-DIPTYVVGVNVVAPKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            + T P KG DIPTYV+GVN      +   IISNASCTTNCLAPF KVLD++FGI+KGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLV+ V+KK   AE+VNAAFR++A+  LKGIL VCD PLVSVDFRC              MG  MVKV+AWYDNEWGYSQR
Sbjct:  204 IITAPAKGADIPTYVIGVNEQDYGHEVADIISNASCTTNCLAPFAKVLDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQR 410          
The following BLAST results are available for this feature:
BLAST of EY710936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3PA_ARATH1.196e-7068.63Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SPIOL7.754e-7068.63Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_TOBAC2.256e-6967.65Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SINAL2.494e-6866.67Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_MAIZE4.255e-6866.67Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_PEA2.758e-6767.16Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_CHLRE9.500e-6060.00Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SCEVA1.792e-5859.70Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PB_TOBAC1.981e-5758.94Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_PEA2.861e-5658.45Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-H02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710936 ID=EY710936; Name=EY710936; organism=Citrus sinensis; type=EST; length=954bp
AAACACGGGCTTCCGCAAGAAAGACTTACTACAGAACCGGGTAAGGGTGA
CATCCCAACCTACGTTGTTGGTGTCAATGTTGTTGCTCCCAAACCAGATG
AGCCCATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTC
GTCAAGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCAC
CACACACTCGTACACTGGCGACCAAAGGCTACTCGATGCTAGCCACCGTG
ACCTCAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACT
GGTGCGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACT
AAACGGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATC
TTGTCATTCAGGTGTCGAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCT
TTCAGAGAAAGCGCTGACAATGAACTGAAAGGGATCCTCTCCGTGTGCGA
CGAGCCCCTCGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCAACCG
TTGATTCATCTCTCACACTTGTCATGGGAAGACACATGGTTAAGGTGATT
GCATGGTATGACAATGAATGGGGTTACTCTCAAAGGGGTGGGGGATCTGG
CCGACTTGGTTGGCCAACACTGGGAGTGGAAGTGAATACTAAATCCGGAA
ACTCGGCGGTAATCGGCACCAACAAGGTCCTTGTTGTTCATTTTTGGGTC
CCCCCATTTATTGTACCGGGCCTTAAAATTGGGAGAAGGGTGACACTATC
TTTTTTAGGGAACGCTTGTCCGCTTGCCTGGCATCAACCAATAAGGATAA
AATTCCTTCCATTCAAAAAACAAGAATAAAAAGGGCGGGCGCCTCTAAGG
GTACGCACCTACGATTCGGGGCGGCGGGGCGGATACTCTTCTTAAGTGCC
ACCC
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