EY746154

Overview
NameEY746154
Unique NameEY746154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.830e-38
Identity = 81/191 (42.41%), Postives = 111/191 (58.12%), Query Frame = 1
Query:   58 CAGCQYGKAHQLPYEESKFKAKKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRYV*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPRLEFGSPFENLWNNKPTVSY 630
            C  C +GK H++ ++ S  +    L+L++SDV GP++  S+GG +Y VTFIDD SR +                    +VE E  +K++ LR+DNGGEY+SREF +Y     IRH+ T   TPQ NGVAER NR + E  RSML    +P  FW E ++TA ++IN+ P   L F  P E +W NK  VSY
Sbjct:  457 CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIP-ERVWTNK-EVSY 645          

HSP 2 Score: 31.187 bits (69), Expect = 1.830e-38
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2
Query:  683 RTKIDKKAVKCIFWGYNNPPKGGERLW 763
            RTK+D K++ CIF GY +  + G RLW
Sbjct:  664 RTKLDDKSIPCIFIGYGD-EEFGYRLW 689          
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 3.117e-23
Identity = 66/218 (30.28%), Postives = 102/218 (46.79%), Query Frame = 1
Query:   55 VCAGCQYGKAHQLPYEESKFKA--KKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRYV*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPRLEFGS--PFENLWNNKPTVSYFSSIPAVYAMYLFPDHPTYQDR 696
            +C  C  GK  +LP+++ K K   K+PL ++HSDV GP+   ++    Y V F+D F+ Y                       E     K+  L  DNG EY S E  Q+  +  I +  T  +TPQ NGV+ER  R +TE  R+M+    +   FW E + TA ++IN++P   L   S  P+E   N KP + +     A   +++      + D+
Sbjct:  454 ICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDK 671          
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: YO22B_YEAST (Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-OR2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 48/205 (23.41%), Postives = 88/205 (42.93%), Query Frame = 1
Query:    1 VKKSMLKGLPQLDVRTNTV----CAGCQYGKA--------HQLPYEESKFKAKKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRY--V*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPR 573
            +KK+ +  L + D+  +      C  C  GK+         +L Y+ES     +P + +H+D+FGPV         Y ++F D+ +R+  V                     ++ +   ++  ++ D G EY+++   ++     I   YT     + +GVAER NR L   CR++LH   +P   W   +  +  + N L  P+
Sbjct:  610 LKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESY----EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK 810          
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: YO21B_YEAST (Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-OR1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 48/205 (23.41%), Postives = 88/205 (42.93%), Query Frame = 1
Query:    1 VKKSMLKGLPQLDVRTNTV----CAGCQYGKA--------HQLPYEESKFKAKKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRY--V*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPR 573
            +KK+ +  L + D+  +      C  C  GK+         +L Y+ES     +P + +H+D+FGPV         Y ++F D+ +R+  V                     ++ +   ++  ++ D G EY+++   ++     I   YT     + +GVAER NR L   CR++LH   +P   W   +  +  + N L  P+
Sbjct:  610 LKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESY----EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK 810          
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: YL22B_YEAST (Transposon Ty2-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-LR2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 48/205 (23.41%), Postives = 88/205 (42.93%), Query Frame = 1
Query:    1 VKKSMLKGLPQLDVRTNTV----CAGCQYGKA--------HQLPYEESKFKAKKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRY--V*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPR 573
            +KK+ +  L + D+  +      C  C  GK+         +L Y+ES     +P + +H+D+FGPV         Y ++F D+ +R+  V                     ++ +   ++  ++ D G EY+++   ++     I   YT     + +GVAER NR L   CR++LH   +P   W   +  +  + N L  P+
Sbjct:  610 LKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESY----EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK 810          
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: YL21B_YEAST (Transposon Ty2-LR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-LR1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 48/205 (23.41%), Postives = 88/205 (42.93%), Query Frame = 1
Query:    1 VKKSMLKGLPQLDVRTNTV----CAGCQYGKA--------HQLPYEESKFKAKKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRY--V*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPR 573
            +KK+ +  L + D+  +      C  C  GK+         +L Y+ES     +P + +H+D+FGPV         Y ++F D+ +R+  V                     ++ +   ++  ++ D G EY+++   ++     I   YT     + +GVAER NR L   CR++LH   +P   W   +  +  + N L  P+
Sbjct:  610 LKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESY----EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK 810          
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: YG21B_YEAST (Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-GR1 PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 48/205 (23.41%), Postives = 88/205 (42.93%), Query Frame = 1
Query:    1 VKKSMLKGLPQLDVRTNTV----CAGCQYGKA--------HQLPYEESKFKAKKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRY--V*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPR 573
            +KK+ +  L + D+  +      C  C  GK+         +L Y+ES     +P + +H+D+FGPV         Y ++F D+ +R+  V                     ++ +   ++  ++ D G EY+++   ++     I   YT     + +GVAER NR L   CR++LH   +P   W   +  +  + N L  P+
Sbjct:  610 LKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESY----EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK 810          
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: YF21B_YEAST (Transposon Ty2-F/Ty2-GR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-F PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 48/205 (23.41%), Postives = 88/205 (42.93%), Query Frame = 1
Query:    1 VKKSMLKGLPQLDVRTNTV----CAGCQYGKA--------HQLPYEESKFKAKKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRY--V*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPR 573
            +KK+ +  L + D+  +      C  C  GK+         +L Y+ES     +P + +H+D+FGPV         Y ++F D+ +R+  V                     ++ +   ++  ++ D G EY+++   ++     I   YT     + +GVAER NR L   CR++LH   +P   W   +  +  + N L  P+
Sbjct:  610 LKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESY----EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK 810          
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: YD23B_YEAST (Transposon Ty2-DR3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-DR3 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 48/205 (23.41%), Postives = 88/205 (42.93%), Query Frame = 1
Query:    1 VKKSMLKGLPQLDVRTNTV----CAGCQYGKA--------HQLPYEESKFKAKKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRY--V*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPR 573
            +KK+ +  L + D+  +      C  C  GK+         +L Y+ES     +P + +H+D+FGPV         Y ++F D+ +R+  V                     ++ +   ++  ++ D G EY+++   ++     I   YT     + +GVAER NR L   CR++LH   +P   W   +  +  + N L  P+
Sbjct:  610 LKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHIKGSRLKYQESY----EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK 810          
BLAST of EY746154 vs. ExPASy Swiss-Prot
Match: YD22B_YEAST (Transposon Ty2-DR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-DR2 PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 48/205 (23.41%), Postives = 88/205 (42.93%), Query Frame = 1
Query:    1 VKKSMLKGLPQLDVRTNTV----CAGCQYGKA--------HQLPYEESKFKAKKPLELIHSDVFGPVKQPSIGGMRYMVTFIDDFSRY--V*AXXXXXXXXXXXXXXXXXXIVEGEVEQKIRCLRTDNGGEYSSREFSQYLRECQIRHQYTCANTPQQNGVAERKNRHLTEICRSMLHAKNVPGRFWAEGMRTAAHVINKLPQPR 573
            +KK+ +  L + D+  +      C  C  GK+         +L Y+ES     +P + +H+D+FGPV         Y ++F D+ +R+  V                     ++ +   ++  ++ D G EY+++   ++     I   YT     + +GVAER NR L   CR++LH   +P   W   +  +  + N L  P+
Sbjct:  610 LKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESY----EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK 810          
The following BLAST results are available for this feature:
BLAST of EY746154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
POLX_TOBAC1.830e-3842.41Retrovirus-related Pol polyprotein from transposon... [more]
COPIA_DROME3.117e-2330.28Copia protein OS=Drosophila melanogaster GN=GIP PE... [more]
YO22B_YEAST6.514e-1323.41Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharo... [more]
YO21B_YEAST6.514e-1323.41Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharo... [more]
YL22B_YEAST6.514e-1323.41Transposon Ty2-LR2 Gag-Pol polyprotein OS=Saccharo... [more]
YL21B_YEAST6.514e-1323.41Transposon Ty2-LR1 Gag-Pol polyprotein OS=Saccharo... [more]
YG21B_YEAST6.514e-1323.41Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharo... [more]
YF21B_YEAST6.514e-1323.41Transposon Ty2-F/Ty2-GR2 Gag-Pol polyprotein OS=Sa... [more]
YD23B_YEAST6.514e-1323.41Transposon Ty2-DR3 Gag-Pol polyprotein OS=Saccharo... [more]
YD22B_YEAST6.514e-1323.41Transposon Ty2-DR2 Gag-Pol polyprotein OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-028-F04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY746154 ID=EY746154; Name=EY746154; organism=Citrus sinensis; type=EST; length=793bp
GTGAAGAAGTCGATGCTTAAGGGACTTCCTCAACTTGACGTGAGAACAAA
TACTGTTTGCGCGGGATGTCAATATGGTAAAGCACATCAATTGCCATACG
AGGAGTCGAAGTTTAAAGCAAAGAAACCATTAGAGTTAATTCACTCTGAT
GTGTTTGGACCCGTTAAGCAACCATCAATTGGCGGAATGCGGTATATGGT
TACGTTCATTGATGATTTCTCCAGATATGTATGAGCTTTCTTCATGAAAG
AAAAATCTGAAGCATTCTCAAAGTTCAAAGAGTTCAAAGAGATAGTCGAA
GGAGAAGTGGAGCAAAAGATTCGTTGCTTGCGCACAGACAACGGGGGTGA
GTATAGCTCGAGAGAGTTTTCTCAATACCTACGGGAATGCCAAATACGTC
ATCAGTATACTTGTGCTAATACGCCACAACAAAATGGTGTAGCAGAGAGG
AAGAATCGGCACCTTACTGAAATTTGCCGGAGTATGCTACATGCGAAGAA
TGTACCTGGAAGATTTTGGGCCGAAGGTATGAGAACTGCAGCTCATGTCA
TCAACAAGCTTCCTCAACCAAGGTTGGAGTTTGGTTCACCCTTTGAAAAT
TTGTGGAACAACAAACCTACAGTTAGCTATTTTTCAAGTATTCCGGCTGT
GTATGCTATGTATTTGTTTCCTGACCATCCTACGTACCAAGATCGATAAA
AAAGCAGTCAAATGTATCTTTTGGGGATACAACAATCCACCAAAAGGGGG
GGAACGGTTGTGGATCCACTAAACGGGAAGGGGCCTCCCCTTC
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