EY710901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710901 vs. ExPASy Swiss-Prot
Match: VPS35_MOUSE (Vacuolar protein sorting-associated protein 35 OS=Mus musculus GN=Vps35 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.413e-36 Identity = 91/210 (43.33%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 13 LVFSSLKLVRQLQGPEENPFGEEGSTTPKKVFQLLNQTIETLYGVPAPELALRLYLQCAEAAND---SDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWV-----DDQDNMKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFE 618 LVF++ +L + + E + ++ +K+F +QTI L EL LRL+LQ A AA + + E VAYEF +QA+ LYE+EISDS+AQ+ AI LIIGT +RM F EN + L + ++KLLKKPDQ RAV C+HLFW + + + G+RV+ CLK+AL+IAN S V LF+EILN+Y+YF+E Sbjct: 532 LVFAAYQLAFRYK--ENSQMDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSL-------QVQLFIEILNRYIYFYE 732
BLAST of EY710901 vs. ExPASy Swiss-Prot
Match: VPS35_HUMAN (Vacuolar protein sorting-associated protein 35 OS=Homo sapiens GN=VPS35 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.099e-35 Identity = 91/210 (43.33%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 13 LVFSSLKLVRQLQGPEENPFGEEGSTTPKKVFQLLNQTIETLYGVPAPELALRLYLQCAEAAND---SDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWV-----DDQDNMKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFE 618 LVF++ +L + + E + ++ +K+F +QTI L EL LRL+LQ A AA + + E VAYEF +QA+ LYE+EISDS+AQ+ AI LIIGT +RM F EN + L + ++KLLKKPDQ RAV C+HLFW + + + G+RV+ CLK+AL+IAN S V LF+EILN+Y+YF+E Sbjct: 532 LVFAAYQLAFRYK--ENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSL-------QVQLFIEILNRYIYFYE 732
BLAST of EY710901 vs. ExPASy Swiss-Prot
Match: VPS35_BOVIN (Vacuolar protein sorting-associated protein 35 OS=Bos taurus GN=VPS35 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.099e-35 Identity = 91/210 (43.33%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 13 LVFSSLKLVRQLQGPEENPFGEEGSTTPKKVFQLLNQTIETLYGVPAPELALRLYLQCAEAAND---SDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWV-----DDQDNMKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFE 618 LVF++ +L + + E + ++ +K+F +QTI L EL LRL+LQ A AA + + E VAYEF +QA+ LYE+EISDS+AQ+ AI LIIGT +RM F EN + L + ++KLLKKPDQ RAV C+HLFW + + + G+RV+ CLK+AL+IAN S V LF+EILN+Y+YF+E Sbjct: 532 LVFAAYQLAFRYK--ENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSL-------QVQLFIEILNRYIYFYE 732
BLAST of EY710901 vs. ExPASy Swiss-Prot
Match: VPS35_SCHPO (Vacuolar protein sorting-associated protein 35 OS=Schizosaccharomyces pombe GN=vps35 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.009e-30 Identity = 72/177 (40.68%), Postives = 105/177 (59.32%), Query Frame = 1 Query: 103 VFQLLNQTIETLY-GVPAPELALRLYLQCAEAANDSDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWV----DDQDNMKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFE 618 +++ +N I LY + EL L LYL AE A+ + AYEFFTQA+ +YEE + DS Q + +IIG LQ+ F V++ DTL K T Y++KLLKKPDQC +Y SHL+W +D +D +RVL CL+++L+IA+A S+ LF+ IL +Y Y+++ Sbjct: 534 LWEFVNTCINVLYKNGDSLELCLALYLSAAEMADQENYPDFAYEFFTQAFSIYEESVLDSELQYQQLLMIIGKLQKTRNFSVDDYDTLITKCTLYASKLLKKPDQCCGIYLASHLWWQVASGEDSRPFQDPKRVLECLQKSLKIADACMDQLT-------SLKLFINILERYFYYYD 703
BLAST of EY710901 vs. ExPASy Swiss-Prot
Match: VPS35_YEAST (Vacuolar protein sorting-associated protein 35 OS=Saccharomyces cerevisiae GN=VPS35 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27 Identity = 72/205 (35.12%), Postives = 116/205 (56.59%), Query Frame = 1 Query: 55 PEENPFGEEGSTTPKKVFQLLNQTIETLYGV---PAPELALRLYLQCAEAANDSDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMH-VFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDNM-----------KDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFEXG 624 P+ S K++F+ +++ I ++ +L L+L LQCA A+ L ++Y+FF+QA+ ++EE +SDS+ Q+ A+ I +LQ+ ++ D+L + T + +KLLKK DQCRAVY CSHL+W + N+ +DG+RVL CL+R+LR+A++ + S L VEILN+ LY+F G Sbjct: 610 PDNKTLLSHYSNLLKQMFKFVSRCINDIFNSCNNSCTDLILKLNLQCAILADQLQLNEISYDFFSQAFTIFEESLSDSKTQLQALIYIAQSLQKTRSLYKEAYYDSLIVRCTLHGSKLLKKQDQCRAVYLCSHLWWATEISNIGEEEGITDNFYRDGKRVLECLQRSLRVADSIMD-------NEQSCELMVEILNRCLYYFIHG 807
BLAST of EY710901 vs. ExPASy Swiss-Prot
Match: VPS35_DICDI (Vacuolar sorting protein 35 OS=Dictyostelium discoideum GN=vps35 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.794e-20 Identity = 67/219 (30.59%), Postives = 116/219 (52.97%), Query Frame = 1 Query: 7 VRLVFSSLKLVRQLQGP--------EENPFGEEGSTTPKKVFQLLNQTIETLYGVPAPELALRLYLQCAEAANDSDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDNM-KDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILNKYLYFFEXGTHRI 636 V LVF SL+ +R + +EN + GS K+F +++TI+ L + +L+ RLYLQ + + L E +A ++++E+I+D +AQV A+ L+I TL + + E ++L + +++LL DQ + + CSHLFWVD+ ++ + VL LK+AL I +SN + G+ FV+ILN+ L++ + T + Sbjct: 532 VPLVFCSLRFIRNFKQQVDSGVISLDENKWIAIGS----KIFTFVSETIKALADIKLADLSFRLYLQALQTFDHCGLVSRVKELAIKALLIFQEDIADFKAQVMALQLLISTLNSLSIPNEEIYESLAAQTIKQASRLLLPQDQAKLISTCSHLFWVDNPSRQYQNPDSVLQALKKALSI------ISNESSPGLGT---FVDILNECLFYCDKETDAV 737 The following BLAST results are available for this feature:
BLAST of EY710901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY710901 ID=EY710901; Name=EY710901; organism=Citrus sinensis; type=EST; length=878bpback to top |