EY746121

Overview
NameEY746121
Unique NameEY746121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY746121 vs. ExPASy Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.180e-38
Identity = 81/104 (77.88%), Postives = 83/104 (79.81%), Query Frame = 1
Query:    1 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 312
            NYR                WTDGLTL RFD HSKTNEQTVQEML+LA KYNKAVQEEDEL PEKLAI NVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV+F
Sbjct:  205 NYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVVF 308          
BLAST of EY746121 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.267e-24
Identity = 57/104 (54.81%), Postives = 68/104 (65.38%), Query Frame = 1
Query:    1 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 312
            NYR                W +GLTL  +  H K NE  V+EML LA  YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV  LM+SNIVQ L  MLDTV+F
Sbjct:  206 NYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVF 309          
BLAST of EY746121 vs. ExPASy Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.267e-24
Identity = 57/104 (54.81%), Postives = 68/104 (65.38%), Query Frame = 1
Query:    1 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 312
            NYR                W +GLTL  +  H K NE  V+EML LA  YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV  LM+SNIVQ L  MLDTV+F
Sbjct:  206 NYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVF 309          
BLAST of EY746121 vs. ExPASy Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.186e-22
Identity = 51/104 (49.04%), Postives = 68/104 (65.38%), Query Frame = 1
Query:    1 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 312
            NYR                W DGLTL  ++ H   NE TV EML+LA  YNK++++E+++ PE+LAI NVG+QD K+HLEE V  +M +NIVQ LG MLDT++F
Sbjct:  204 NYRKNELEQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKSLEDEEKMTPEQLAIKNVGKQDPKRHLEEKVDKVMQNNIVQCLGAMLDTIVF 307          
BLAST of EY746121 vs. ExPASy Swiss-Prot
Match: PSDE_DICDI (26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 1
Query:    1 NYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 312
            NYR                WT+GL + +FD H ++NE+ +  +L L  +Y K++Q+ED++ PEK  ++ VG+ D K+HL   V  LM++N+V+ L  MLDTV F
Sbjct:  203 NYRKNELEQKMLLNLHKKKWTEGLIVDKFDTHEQSNEKQINNLLELTKQYQKSIQDEDKIEPEKKEVSAVGKLDPKRHLISDVHTLMANNVVRVLTVMLDTVTF 306          
BLAST of EY746121 vs. ExPASy Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe GN=rpn11 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 1
Query:   58 WTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 312
            W  GL L  F+  ++ N  ++ +M +L+ +Y + VQ E  L PE+L I  VG+QD KKHL+  V   + +NI   L  MLD+V F
Sbjct:  224 WAHGLLLENFNSAAEKNHASIDKMKSLSEQYTERVQNEVTLSPEQLRIQYVGKQDPKKHLDAEVQKCIDNNISSMLACMLDSVAF 308          
BLAST of EY746121 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 29/82 (35.37%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   58 WTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDT 303
            W D +++  +    + N++ ++ ML LA  Y KA+++E  +  ++LAI NVG+ D K+H+ + VS +++ NIVQ+L  M+ T
Sbjct:  227 WMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKALEDEKNMTDQELAIKNVGKMDPKRHIADEVSKMLNDNIVQSLAGMMAT 308          
The following BLAST results are available for this feature:
BLAST of EY746121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PSDE_ARATH1.180e-3877.8826S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_MOUSE1.267e-2454.8126S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_HUMAN1.267e-2454.8126S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_DROME1.186e-2249.0426S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_DICDI4.364e-1738.4626S proteasome non-ATPase regulatory subunit 14 OS... [more]
RPN11_SCHPO1.606e-1140.0026S proteasome regulatory subunit rpn11 OS=Schizos... [more]
PSDE_CAEEL4.674e-1135.3726S proteasome non-ATPase regulatory subunit 14 OS... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-028-C03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY746121 ID=EY746121; Name=EY746121; organism=Citrus sinensis; type=EST; length=591bp
AATTACAGGAAGAATGAACTTGAAGAAAAGATGCTACTAAATCTGCACAA
GAAGAAATGGACTGATGGATTAACACTTCATCGCTTTGATTGCCATTCCA
AAACCAATGAACAGACTGTCCAGGAGATGTTAAATTTGGCTGTCAAATAT
AACAAGGCAGTTCAAGAAGAAGACGAGCTGCCGCCAGAGAAGCTGGCCAT
TGCTAATGTGGGAAGGCAAGATGCAAAGAAGCACCTTGAGGAACATGTCT
CCAACTTGATGTCCTCAAACATAGTTCAAACTTTGGGAACCATGCTTGAT
ACAGTCATATTCTAGATGTTGGTTTGTTTTCTGTAGTTTCACTAGCTTCA
CTCTTTTTTGAGTATTTGTATGGCATTTACAGTTTGAATTTGTGCTTTAT
AATTTAACATTTTAATTCTGAAGGCCTATCCTTTTGTCATGGATGTGCTG
GTTTGTGCTGAAACGTAGTATATGATTGTGGCTTACTTTTTATGTGGTTG
GACAATTCATTGCTGTATTTTGCACTCAGTTTTGATGCTAGGCAATGCAA
AAATTAGTTTTGAGTTTTAAAAAAAAAACAAAACAAACAAA
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