EY710686

Overview
NameEY710686
Unique NameEY710686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.744e-45
Identity = 101/141 (71.63%), Postives = 112/141 (79.43%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLSVTTWLLRGTETSLFFATQ 424
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAKAG GSATLSMAYAAA+     + +G  G   V+  S      + TE + FFAT+
Sbjct:  177 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACL-RGLRGDANVIECSFVA--SQVTELA-FFATK 313          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.744e-45
Identity = 101/141 (71.63%), Postives = 112/141 (79.43%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLSVTTWLLRGTETSLFFATQ 424
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAKAG GSATLSMAYAAA+     + +G  G   V+  S      + TE + FFAT+
Sbjct:  177 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACL-RGLRGDANVIECSFVA--SQVTELA-FFATK 313          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.278e-45
Identity = 102/141 (72.34%), Postives = 111/141 (78.72%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLSVTTWLLRGTETSLFFATQ 424
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP EI+YLT+RIQNGGTEVVEAKAG GSATLSMAYAAA+     + +G  G   VV  S      + TE + FFAT+
Sbjct:  173 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACL-RGLRGDANVVECSFVA--SQVTELA-FFATK 309          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45
Identity = 92/103 (89.32%), Postives = 94/103 (91.26%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQ 310
            FKK GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKP  S T  EI YLTDRIQNGGTEVVEAKAG GSATLSMAYAA +
Sbjct:  175 FKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVK 277          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44
Identity = 88/103 (85.44%), Postives = 95/103 (92.23%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQ 310
            FK+ GTYDPKRLLGVTMLDVVRANTFVAEVLG+DPR+VDVPVVGGHAG+TILPLLSQ+KP CS TP EI+YLT RIQNGG EVVEAKAG GSATLSMAYAA +
Sbjct:  172 FKRAGTYDPKRLLGVTMLDVVRANTFVAEVLGVDPRDVDVPVVGGHAGITILPLLSQIKPPCSFTPKEIEYLTGRIQNGGPEVVEAKAGAGSATLSMAYAAVK 274          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.476e-44
Identity = 101/141 (71.63%), Postives = 111/141 (78.72%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLSVTTWLLRGTETSLFFATQ 424
            FKK GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPR+V+VPVVGGHAGVTILPLLSQVKP  S T  EI+YLTDRIQNGGTEVVEAKAG GSATLSMAYAA +     + +G  G   VV  +  +   + TE   FFAT+
Sbjct:  175 FKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQEEINYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL-RGLRGDAGVVECAFVS--SQVTELP-FFATK 311          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.289e-44
Identity = 88/103 (85.44%), Postives = 95/103 (92.23%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQ 310
            FKK GT+DPK+L+GVTMLDVVRANTFVAEV+ LDPREV+VPVVGGHAGVTILPLLSQVKP CS T  EI+YLTDRIQNGGTEVVEAKAG GSATLSMAYAA +
Sbjct:  173 FKKAGTFDPKKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVE 275          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 1.250e-43
Identity = 92/123 (74.80%), Postives = 100/123 (81.30%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLS 370
            FKK GTYDPKRLLGVT LDVVRANTFVAEVLGLDPR+V+VPV+GGHAGVTILPLLSQV P CS T  EI YLT RIQNGGTEVVEAKAG GSATLSMAYAA++     + +G  G   +V  S
Sbjct:  175 FKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACL-RGLRGDAGIVECS 296          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHP_ARATH (Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At3g47520 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.693e-32
Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 2
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQ 310
            KK G YDPK+L GVT LDVVRANTFV++   L   +VDVPV+GGHAG+TILPLLS+ KPS + T  EI  LT RIQN GTEVV+AKAG GSATLSMAYAAA+
Sbjct:  214 KKKGVYDPKKLFGVTTLDVVRANTFVSQKKNLKLIDVDVPVIGGHAGITILPLLSKTKPSVNFTDEEIQELTVRIQNAGTEVVDAKAGAGSATLSMAYAAAR 315          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.433e-31
Identity = 78/139 (56.12%), Postives = 95/139 (68.35%), Query Frame = 2
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLSVTTWLLRGTETSLFFAT 421
            KK G YDPKR+ GVT LDVVR+  FV+E+ G D  +  VPVVGGHAG+TI+PLLSQVKPS   +  EI  LT RIQ+ GTEVV AKAG GSATLSMA A A+    LV +G +G K V    V +  ++G E   +F+T
Sbjct:  160 KKAGVYDPKRVFGVTTLDVVRSQAFVSELKGHDASKTVVPVVGGHAGITIIPLLSQVKPSTKFSEEEISKLTPRIQDAGTEVVNAKAGAGSATLSMALAGARFANALV-RGIKGEKNVQCAYVASDAVKGVE---YFST 294          
The following BLAST results are available for this feature:
BLAST of EY710686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDHG2_BRANA1.744e-4571.63Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA1.744e-4571.63Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHG1_ARATH2.278e-4572.34Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG_CITLA8.655e-4589.32Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_SOYBN1.130e-4485.44Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG_CUCSA1.476e-4471.63Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG2_ARATH3.289e-4485.44Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG_ORYSJ1.250e-4374.80Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHP_ARATH1.693e-3270.59Malate dehydrogenase, chloroplastic OS=Arabidopsis... [more]
MDHM_CAEEL1.433e-3156.12Probable malate dehydrogenase, mitochondrial OS=Ca... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-086-A10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710686 ID=EY710686; Name=EY710686; organism=Citrus sinensis; type=EST; length=806bp
TTTCAAGAAAGTTGGCACTTATGATCCAAAGCGACTTTTGGGAGTCACAA
TGCTTGATGTTGTTCGAGCCAATACTTTTGTGGCTGAGGTCTTGGGTCTT
GACCCCAGGGAAGTTGATGTTCCAGTTGTGGGAGGTCATGCTGGGGTTAC
TATTTTACCTCTTTTATCTCAGGTTAAACCATCATGCTCTCTCACCCCTA
CAGAAATTGACTACTTGACAGATCGTATCCAGAATGGTGGTACAGAAGTA
GTTGAGGCAAAAGCTGGACCTGGTTCGGCCACTCTATCCATGGCATATGC
TGCTGCCCAAGTTTTGCCAATGCTTGTCTCCCAAGGTTTTGAAGGGGGGA
AGCCAGTGGTTAATTTGAGTGTGACTACCTGGCTTCTACGGGGAACTGAA
ACTTCCCTTTTCTTTGCCACCCAAGGGACGGGCTTGGACGTGGCTGGGAA
TTGGAGGAAATTAACCCACATTGGCCCATTTGAATAGAATAAGAAAAGGG
CTGGTTTTGGAAAAAGGCAAATAAAAAAGTTTGCCGGGAATCATTTATAT
AAAAGGAGTCCCTTTTTTTCTACGAGAATTCGTGTAACCTCATTCCCAAT
GGGGGCCAAAAAGAAAAAGGGGTGGGGCTTTTTTGTGTGGTCGGCGTCCA
AACTTAACCCAAGAGAATTAGTTTTCCCCCCACACAAAACAAAAAAGCGG
AACAGTTTTCCTTTCTTTTTTCCCCTAATTTCCCATAAAGGAGTATATTA
TATGTTGAGAAACTCAAAAAGCCTAAACAAGAAACCGTATATCATAATTT
TCTCTC
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