EY710682

Overview
NameEY710682
Unique NameEY710682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 3.319e-35
Identity = 73/100 (73.00%), Postives = 75/100 (75.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 305
            TPN          SKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC              MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct:  302 TPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 401          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 1.647e-34
Identity = 72/100 (72.00%), Postives = 74/100 (74.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 305
            TPN          SKKTFAEEVNAAFR+SA+ ELKGIL VCDEPLVSVDFRC              MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK
Sbjct:  297 TPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 396          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.810e-34
Identity = 72/100 (72.00%), Postives = 73/100 (73.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 305
            TPN          SKKTFAEEVNAAFRE+AD ELKGIL VCDEPLVSVDFRC              MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN WK
Sbjct:  293 TPNVSVVDLVVQVSKKTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 392          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.670e-34
Identity = 71/100 (71.00%), Postives = 74/100 (74.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 305
            TPN          SKKTFAEEVNAAFR++A+ ELKGIL VCDEPLVSVDFRC              MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK
Sbjct:  134 TPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 233          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 3.107e-33
Identity = 71/100 (71.00%), Postives = 72/100 (72.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 305
            TPN          SKKTFAEEVN AFRESA  EL GILSVCDEPLVSVDFRC              MGDD+VKVIAWYDNEWGYSQRVVDLADIVANNWK
Sbjct:  306 TPNVSVVDLVVQVSKKTFAEEVNEAFRESAAKELTGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDLVKVIAWYDNEWGYSQRVVDLADIVANNWK 405          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.484e-30
Identity = 65/100 (65.00%), Postives = 68/100 (68.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 305
            TPN          SKKT AEEVN AFR++A NEL GIL VCD PLVSVDFRC              MGDDMVKVI+WYDNEWGYSQRVVDLADI AN WK
Sbjct:  304 TPNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELTGILEVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVISWYDNEWGYSQRVVDLADICANQWK 403          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.764e-28
Identity = 62/100 (62.00%), Postives = 70/100 (70.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 302
            TPN          +KK   AE+VNAAFR++AD  LKG+L+VCDEPLVSVDFRC              MGDDMVKV+AWYDNEWGYSQRVVDLA +VANNW
Sbjct:  292 TPNVSVVDLVVNVAKKGITAEDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANNW 391          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.651e-26
Identity = 60/100 (60.00%), Postives = 67/100 (67.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 302
            TPN          +KK   AE+VNAAFR++A+  LKGIL VCD PLVSVDFRC              MGDDMVKV+AWYDNEWGYSQRVVDLA +VAN W
Sbjct:  323 TPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANKW 422          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.817e-26
Identity = 56/99 (56.57%), Postives = 65/99 (65.66%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 302
            TP            KKTFAEEVNAAFRE+A+  +KG+L V D PLVS+DF+C              MGDDMVKV+AWYDNEWGYSQRVVDLA++ A  W
Sbjct:  274 TPTVSVVDLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAEVTAKKW 372          
BLAST of EY710682 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 5.312e-25
Identity = 57/100 (57.00%), Postives = 65/100 (65.00%), Query Frame = 3
Query:    6 TPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 302
            TPN           KK   AE+VN AFR++A+  +KGIL VCD PLVSVDFRC              MGDDMVKV+AWYDNEWGYSQRVVDLA +VA+ W
Sbjct:  319 TPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKW 418          
The following BLAST results are available for this feature:
BLAST of EY710682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
G3PA_SPIOL3.319e-3573.00Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_ARATH1.647e-3472.00Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_TOBAC2.810e-3472.00Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SINAL3.670e-3471.00Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_PEA3.107e-3371.00Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_MAIZE5.484e-3065.00Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PB_TOBAC1.764e-2862.00Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_PEA1.651e-2660.00Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PA_CHLRE2.817e-2656.57Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PB_ARATH5.312e-2557.00Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-086-A06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710682 ID=EY710682; Name=EY710682; organism=Citrus sinensis; type=EST; length=512bp
GTGCCACACCAAACGTCTCGGTTGTTGATCTTGTCGTTCAGGTGTCGAAG
AAAACCTTCGCAGAAGAGGTGAACGCCGCTTTCAGAGAAAGCGCTGACAA
TGAACTGAAAGGGATCCTCTCCGTGTGCGACGAGCCCCTCGTTTCGGTCG
ACTTCAGGTGCTCTGATGTATCCTCAACCGTTGATTCATCTCTCACACTT
GTCATGGGAGACGACATGGTTAAGGTGATTGCATGGTATGACAATGAATG
GGGTTACTCTCAAAGGGTTGTGGATTTGGCCGACATTGTTGCCAACAACT
GGAAGTGAAGTAAATACTAAAATCGGAACTCGGCTGTAATCGGCACAACG
ATGTTCTTGTTTTTCATTTTTGGTTCCCCCATTTATTGTTCTGCGTCTTA
GAATTTGTAGAGTGGATAACACTATCTTATTATGGAACCTTTTTCCTTTG
CCTGTCATTAATCCTTATGCAATAAAATTCTTTAATTAAAGTTGATAAAA
AAAAAAAAAAAA
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