EY710670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 4.396e-45 Identity = 97/146 (66.44%), Postives = 111/146 (76.03%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELE------KGMGVP*APQVTRILRWTLLDNVESWPMYGCTDAT 420 ASSMISSATVAT +RA+ AQA+MVAPFTGLKS++AFPAT+K+NNDITS+ASNGGRVQCMKVWPP GL+KFETLSYLPPLS E+L K+I YLI GWIPCLEFELE + P + W L PM+GCTDAT Sbjct: 2 ASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKL-------PMFGCTDAT 140
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 2.849e-44 Identity = 101/184 (54.89%), Postives = 122/184 (66.30%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGM---GVP*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVRNYRN*KQRRPGCRGSVSLLPK 543 ASSMISSAT+AT N +S AQA+MVAPFTGLKS+SAFP T+K NNDITS+ASNGGRVQCM+VWPP G KKFETLSYLP L+ L KE++YL+RS WIPCLEFELE+G P WT+ PM+GCTD+ E +KE P +F+R R+ C ++ PK Sbjct: 2 ASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMW----KLPMFGCTDSAQVLE-ELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPK 180
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.083e-43 Identity = 100/184 (54.35%), Postives = 121/184 (65.76%), Query Frame = 1 Query: 7 SMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESW--PMYGCTDATPGFEGGWGRVQKENPLSFVRNYRN*KQRRPGCRGSVSLLPK 543 ++ISSA V T NRAS AQA++VAPFTGLKSS+ FP TKKTNNDITSIASNGGRV CM+VWPP G KKFETLSYLPPL++E L KE+ YLIR GWIPCLEFELEKG +P WT+ W P++G TD++ + + E P SF+R R+ C ++ PK Sbjct: 2 ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTM------WRLPLFGATDSSQVLK-ELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTPK 178
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 4.115e-43 Identity = 90/142 (63.38%), Postives = 106/142 (74.65%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGVP*APQVTRIL---RWTLLDNVESWPMYGCTDA 417 ASSM+S+ATVA+ NR S AQA+MVAPFTGLKS+ FP T+KTN+DITSI SNGG+VQCMKVWP G+KKFETLSYLPPL+ E L E+ YL+RSGWIPCLEFELE G+ +V WT+ PM+GCTDA Sbjct: 2 ASSMLSTATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMW----KLPMFGCTDA 139
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 7.018e-43 Identity = 93/159 (58.49%), Postives = 111/159 (69.81%), Query Frame = 1 Query: 13 ISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVR 480 ISS+ +AT NR + QAS+ APFTGLKS+ AFP TKK NND +S+ SNGGRVQCMKVWPP GLKK+ETLSYLPPLSDEAL KEI+YLIR+ WIPCLEFELE G +P WT+ PM+GCTD+ + G +KE P +F+R Sbjct: 4 ISSSAIATVNRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMW----KLPMFGCTDSAQVMK-EVGECKKEYPNAFIR 157
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.042e-42 Identity = 91/142 (64.08%), Postives = 104/142 (73.24%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKG---MGVP*APQVTRILRWTLLDNVESWPMYGCTDA 417 ASSM+S+A VA NRAS AQASMVAPFTGLKS+SAFP T+KT DITSIASNGGRVQCM+VWPP G K +ETLSYLPPL+ E L KE+ YL+R GW+PCLEFELE G +P WT+ PM+GCTDA Sbjct: 2 ASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMW----KLPMFGCTDA 139
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.042e-42 Identity = 97/163 (59.51%), Postives = 114/163 (69.94%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVR 480 A SMISSATVA +RAS AQ+SMVAPFT LKS+SAFP T+KTNNDITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E L KE++YL+R IPCLEFELE G +P WT+ PM+GC D++ + +K P +F+R Sbjct: 2 ACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMW----KLPMFGCNDSSQVLK-ELEECKKAYPSAFIR 159
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 5.941e-42 Identity = 98/165 (59.39%), Postives = 116/165 (70.30%), Query Frame = 1 Query: 1 ASSMISSATVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVR 480 ASSMISS TVAT A+R + AQA MVAPF GLKSSSAFP T+K+N DITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEFELE G +P WT+ PM+GCTD++ + +K P SF+R Sbjct: 2 ASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMW----KLPMFGCTDSSQVLK-ELEEAKKAYPQSFIR 160
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.729e-41 Identity = 98/165 (59.39%), Postives = 116/165 (70.30%), Query Frame = 1 Query: 1 ASSMISSATVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDATPGFEGGWGRVQKENPLSFVR 480 ASSMISS TVAT A+R + AQA MVAPFTGLKSSSA P T+K+N DITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEFELE G +P WT+ PM+GCTD++ + +K P SF+R Sbjct: 2 ASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMW----KLPMFGCTDSSQVLK-ELEEAKKAYPQSFIR 160
BLAST of EY710670 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.463e-40 Identity = 88/144 (61.11%), Postives = 109/144 (75.69%), Query Frame = 1 Query: 1 ASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGMGV---P*APQVTRILRWTLLDNVESWPMYGCTDAT 420 ASS++SSA VAT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G +P WT+ PM+GCTDAT Sbjct: 2 ASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMW----KLPMFGCTDAT 139 The following BLAST results are available for this feature:
BLAST of EY710670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710670 ID=EY710670; Name=EY710670; organism=Citrus sinensis; type=EST; length=1043bpback to top |