EY710661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RD23D_ARATH (Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana GN=RAD23-4 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 3.096e-45 Identity = 90/105 (85.71%), Postives = 97/105 (92.38%), Query Frame = 3 Query: 3 QLLQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVQGGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 317 Q+LQPMLQELGKQNPQLVRLIQEHQADFLRLINEPV+G E N+ +QL MPQ++ VTPEEREAIERLE MGFDRA+VLEVFFACNKNEELAANYLLDHMHEFED Sbjct: 274 QILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEE-NVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RD23C_ARATH (Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana GN=RAD23-3 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 1.438e-42 Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 3 Query: 3 QLLQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVQGG--EGNLGDQLAGLMPQ--SIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 317 Q+LQPMLQELGKQNP L+RLIQ+HQADFLRLINEPV+GG GNL Q+A MPQ +IQVT EEREAIERLEAMGF+RA+VLEVFFACNKNEELAANYLLDHMHEFE+ Sbjct: 311 QVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE 419
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RAD23_ORYSJ (Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 3.666e-38 Identity = 78/106 (73.58%), Postives = 93/106 (87.74%), Query Frame = 3 Query: 3 QLLQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVQGG-EGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 317 Q+LQP+LQELGKQNPQ+++LIQE+QA+FL LINEP +G E NL DQ MPQ+I VTPEE EAI RLEAMGFDRA+VL+VFFACNK+E+LAANYLLDHM+EF+D Sbjct: 283 QILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RD23B_ARATH (Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana GN=RAD23-2 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 4.481e-36 Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 3 QLLQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVQGGEGNLG--DQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 317 Q+LQPMLQELGKQNPQL+RLIQE+QA+FL+L+NEP +G +G++ DQ MP S+ VTPEE+E+IERLEAMGFDRAIV+E F +C++NEELAANYLL+H +FED Sbjct: 262 QILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RD23A_ARATH (Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 1.304e-35 Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 3 QLLQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVQG--GEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 317 Q+LQPMLQELGKQNPQL+RLIQE+QA+FL+L+NEP +G GEG++ DQ MP +I VTP E+EAI+RLEAMGFDRA+V+E F AC++NEELAANYLL++ +FED Sbjct: 265 QILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RD23B_HUMAN (UV excision repair protein RAD23 homolog B OS=Homo sapiens GN=RAD23B PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22 Identity = 51/106 (48.11%), Postives = 75/106 (70.75%), Query Frame = 3 Query: 6 LLQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVQ----------GGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLL 293 LL +LQ++G++NPQL++ I +HQ F++++NEPVQ GG G + + +G M IQVTP+E+EAIERL+A+GF +V++ +FAC KNE LAAN+LL Sbjct: 298 LLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGSGHM-NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL 402
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RD23B_BOVIN (UV excision repair protein RAD23 homolog B OS=Bos taurus GN=RAD23B PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.204e-22 Identity = 51/106 (48.11%), Postives = 74/106 (69.81%), Query Frame = 3 Query: 6 LLQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVQ----------GGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLL 293 LL +LQ++G++NPQL++ I +HQ F++++NEPVQ GG G + + G M IQVTP+E+EAIERL+A+GF +V++ +FAC KNE LAAN+LL Sbjct: 297 LLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGGGHM-NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL 401
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RD23B_RAT (UV excision repair protein RAD23 homolog B OS=Rattus norvegicus GN=Rad23b PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21 Identity = 51/112 (45.54%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 6 LLQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVQ----------------GGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLL 293 LL +LQ++G++NPQL++ I +HQ F++++NEPVQ GG G + + +G M IQVTP+E+EAIERL+A+GF +V++ +FAC KNE LAAN+LL Sbjct: 298 LLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGGGGGGGGGGIAEAGSGHM-NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL 408
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RD23B_MOUSE (UV excision repair protein RAD23 homolog B OS=Mus musculus GN=Rad23b PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21 Identity = 51/113 (45.13%), Postives = 75/113 (66.37%), Query Frame = 3 Query: 6 LLQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVQ-----------------GGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLL 293 LL +LQ++G++NPQL++ I +HQ F++++NEPVQ GG G + + +G M IQVTP+E+EAIERL+A+GF +V++ +FAC KNE LAAN+LL Sbjct: 298 LLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGGGGGGGGGGGIAEAGSGHM-NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL 409
BLAST of EY710661 vs. ExPASy Swiss-Prot
Match: RD23A_MOUSE (UV excision repair protein RAD23 homolog A OS=Mus musculus GN=Rad23a PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.185e-20 Identity = 50/112 (44.64%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 6 LLQPMLQELGKQNPQLVRLIQEHQADFLRLINEP---------VQGGEGNLGDQLAGLMPQSIQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFE 314 LL +LQ+LG++NPQL++ I HQ F++++NEP V+G G +G++ + IQVTP+E+EAIERL+A+GF ++V++ +FAC KNE LAAN+LL + E Sbjct: 254 LLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGEVGAIGEEAPQM--NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDDE 363 The following BLAST results are available for this feature:
BLAST of EY710661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710661 ID=EY710661; Name=EY710661; organism=Citrus sinensis; type=EST; length=543bpback to top |