EY710653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710653 vs. ExPASy Swiss-Prot
Match: RH28_ORYSJ (DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0481100 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 6.897e-28 Identity = 81/178 (45.51%), Postives = 98/178 (55.06%), Query Frame = 3 Query: 3 ILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASIEKGKGSGNEVTSAQQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDE-DQVDKLQGSGKDKKEKAGISMVDLAYRRXXXXXXXXXXLDAGKIVKSNGKKSKHSSQESNSRAKEMRELFHSDMSEKK 533 ILRKAEMEATKAENMIAHK+EI++RPKRTWF TEKEKKL KA K S +GK S + V SAQQA DE + ++ + S KKEK G S+VD+AYRR AG N KK+K S + +R +EM+ELF +DMSE K Sbjct: 598 ILRKAEMEATKAENMIAHKDEIYSRPKRTWFATEKEKKLLAKAAKESTSQGK-SNSGVISAQQAEDLRLKEKKRREREKNLPRKKRRRLEAEREMLEDESEDEEEAKESKGGKKEKKGQSLVDVAYRRAKSMKASGKR-GAGTGKGKNDKKAKQHSGKGPTRQEEMQELFQNDMSEWK 773 HSP 2 Score: 23.483 bits (49), Expect = 6.897e-28 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 538 KRTGGIRKKPKHSFKRQSR 594 K+ +RKK K+SFK +SR Sbjct: 779 KKNNVMRKKSKNSFKSKSR 797
BLAST of EY710653 vs. ExPASy Swiss-Prot
Match: RH28_ARATH (DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana GN=RH28 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.710e-22 Identity = 70/191 (36.65%), Postives = 97/191 (50.79%), Query Frame = 3 Query: 6 LRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASIEKGKGSGNEVTSAQQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--------EDQVDKLQG--SGKDKK----EKAGISMVDLAYRRXXXXXXXXXXLDAGKIVKSN-GKKSKHSSQESNSRAKEMRELFHSDMSEKK 533 LRKAEME KAENM+ H++EI+ARPKRTWF+TEKEKKL +A+K S G +G E+ SA +A D +++ D+ +G GKDKK +K G+++ DL Y R +D+GK+ + KK S + R +EM++LF SDM EKK Sbjct: 572 LRKAEMEFAKAENMLEHRDEIYARPKRTWFMTEKEKKLVAQAEKDS--AGNPAGGELVSADRAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDNEGEEEEEDEEGDEKRGRSRGKDKKKQETDKKGLTLKDLGYMRAKAVKAKQRAIDSGKMERPKPDKKQSRSKPRNQPRGEEMKDLFKSDMGEKK 760 The following BLAST results are available for this feature:
BLAST of EY710653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY710653 ID=EY710653; Name=EY710653; organism=Citrus sinensis; type=EST; length=1006bpback to top |