EY710652

Overview
NameEY710652
Unique NameEY710652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length989
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.667e-30
Identity = 88/225 (39.11%), Postives = 123/225 (54.67%), Query Frame = 2
Query:    2 VKAVVTVKPTVGGFLSNISXXXXXXXXXXXXXXXXXXXXVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSKHDNKQ----KRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKNL**NL*FMMSTMNLGRSRKKNLNLQRPVLWKAKQNPFIP*TLQNWTPP 652
            VKAV T+K TV G L+++                     VS+EL+ KTG  K+T+  YA K+  D  G + YE++F+VP+GFG IGA++V NE  +EM+L+D+ L   DG  N  V  + CNSW+  K    +    KR+FF  K YLP QTP GL+ YR E+L   RGNG G+R+    +  +     N   +   N +L RPVL  +KQ P+ P   +   PP
Sbjct:   98 VKAVATIKVTVEGLLNSLRPSKAIDNIRDLIGRSLFLELVSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVLPIRCNSWVQPKSSIDEGTPGKRIFFA-KAYLPGQTPAGLRSYREEDLKQKRGNGAGQREA--DDRVYDYDVYNDLGNPDSNGDLARPVLGGSKQFPY-PRRCRTGRPP 318          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.844e-30
Identity = 89/225 (39.56%), Postives = 119/225 (52.89%), Query Frame = 2
Query:    2 VKAVVTVKPTVGGFLSNISXXXXXXXXXXXXXXXXXXXXVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSK----HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKNL**NL*FMMSTMNLGRSRKKNLNLQRPVLWKAKQNPFIP*TLQNWTPP 652
            VKAV T+K TVG  ++                       VS+ELD KTG +K+T++ YA  +  D    + YE++F+VPSGFG IGAI+V NE  +EM+L+DI L   DG  N  V  + CNSW+  K         KR+FF NK YLP QTP GL+ YR  +L   RG+G GER+    +  +     N   +   N +L RPVL   KQ P+ P   +   PP
Sbjct:   86 VKAVATIKVTVGELINR------SIDIRDLIGRSLSLELVSSELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREA--DDRVYDYDVYNDLGNPDSNGDLARPVLGGNKQFPY-PRRCRTGRPP 301          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.933e-28
Identity = 63/135 (46.67%), Postives = 90/135 (66.67%), Query Frame = 2
Query:  119 VSAELDPKTGLD----KSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDG--LPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            +S ++ P+T       + +I+D+ +K GA GD ++ Y +EF V + FGE GAI V N H++E +L+ IV++G  LP GPV+  CNSW+ S  +   KRVFF+NK YLPS+TP GL+  R +EL  LRG+G G RK
Sbjct:  118 ISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGD-HVVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKELKDLRGDGTGVRK 251          

HSP 2 Score: 29.6462 bits (65), Expect = 1.933e-28
Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 3
Query:  504 KTYDRIYDL*CLQ*ILEDPEKKT*IYKGLCFGRQNKTPLFPKRCKTGRPP 653
            K  DRIYD       L +P+K     + +  G   K P +P+RC+TGRPP
Sbjct:  251 KLSDRIYDYATYN-DLGNPDKGKEFIRPILGGE--KIP-YPRRCRTGRPP 296          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.476e-28
Identity = 72/169 (42.60%), Postives = 103/169 (60.95%), Query Frame = 2
Query:  119 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL--DGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKNL**NL*FMMSTMNLGRSRKKNLNLQRPVLWKAKQNPF 619
            VS+ELDPKTG ++  ++ +A     +G     YE++  VP+ FG +GA+LVENEHH+EM++KDI L   G  +  +     SW+HSK D+ + R FFT K YLPSQTP G++  R +EL  LRG+G  ERK       +   T N      KN++ +RPVL   K++P+
Sbjct:  106 VSSELDPKTGRERERVKGFAHMTLKEGT----YEAKMSVPASFGPVGAVLVENEHHREMFIKDIKLITGGDESTAITFDVASWVHSKFDDPEPRAFFTVKSYLPSQTPPGIEALRKKELETLRGDGHSERKFH--ERVYDYDTYNDLGDPDKNIDHKRPVL-GTKEHPY 267          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.226e-28
Identity = 60/133 (45.11%), Postives = 88/133 (66.17%), Query Frame = 2
Query:  119 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            +S ++DPKT   K +    ++D+++K  +  +  + Y +EF V S FG  GAI V N+H KE +L+ I ++G   GPV+  CNSW+ S+ D+  KR+ FTN+ YLPS+TP GL+  R +EL  LRGNG+GERK
Sbjct:  130 MSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAE-RVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERK 261          

HSP 2 Score: 22.7126 bits (47), Expect = 7.226e-28
Identity = 17/52 (32.69%), Postives = 25/52 (48.08%), Query Frame = 3
Query:  492 KESAKTYDRIYDL*CLQ*ILEDPEKKT*IYKGLCFGRQNKTPLFPKRCKTGR 647
            K   K  DRIYD      I  +P+    + +    GR+     +P+RC+TGR
Sbjct:  257 KGERKLSDRIYDYDVYNDI-GNPDISRELARPTLGGREFP---YPRRCRTGR 304          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.227e-28
Identity = 59/133 (44.36%), Postives = 87/133 (65.41%), Query Frame = 2
Query:  119 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            +S +LDPKT L K +    ++D+++K     +  + Y +EF V + FG  GAI V N+H KE +L+ I ++G   GPV+  CNSW+ S+ D+  KR+FFTN+ YLP++TP GL+  R +EL  LRG+G G RK
Sbjct:  124 ISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAE-RVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRK 255          

HSP 2 Score: 26.1794 bits (56), Expect = 7.227e-28
Identity = 17/53 (32.08%), Postives = 28/53 (52.83%), Query Frame = 3
Query:  504 KTYDRIYDL*CLQ*ILEDPEKKT*IYKGLCFGRQNKTPLFPKRCKTGRPPVVA 662
            K  DRIYD       L +P+K + + +    G++     +P+RC+TGR   V+
Sbjct:  255 KLSDRIYDFDVYN-DLGNPDKSSELSRPKLGGKEVP---YPRRCRTGRQSTVS 303          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.390e-26
Identity = 54/127 (42.52%), Postives = 85/127 (66.93%), Query Frame = 2
Query:  119 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGE 499
            +SA+ D +      T++DYA+++ A+     +YE EFE+P  FG +GAI ++N++H++++LK + L  LP G +  TC SW+  K  +  KR+FF++K YLPSQTP+ LK+YR EEL  L+G  + E
Sbjct:  111 ISAKTDQRI-----TVEDYAQRVWAEAPDE-KYECEFEMPEDFGPVGAIKIQNQYHRQLFLKGVELK-LPGGSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPLKKYRKEELETLQGKNREE 230          

HSP 2 Score: 26.9498 bits (58), Expect = 6.390e-26
Identity = 18/51 (35.29%), Postives = 25/51 (49.02%), Query Frame = 3
Query:  510 YDRIYDL*CLQ*ILE---DPEKKT*IYKGLCFGRQNKTPLFPKRCKTGRPP 653
            ++RIYD      + +   DPE    +  GL       T  +P+RCKTGR P
Sbjct:  237 FERIYDYDVYNDVGDPDNDPELARPVIGGL-------THPYPRRCKTGRKP 280          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.832e-25
Identity = 61/131 (46.56%), Postives = 74/131 (56.49%), Query Frame = 2
Query:  119 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL--DGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            VS+ELDP+TG ++  I    +  G   D    YE+ F+VP+ FG IGA+ V N HH EM L DI +   G     V   C SW+   H    KRVFF    YLPSQTP G++  R  EL ILRG G GERK
Sbjct:  120 VSSELDPQTGQEREPISGAVKHSGRVDDEWDMYEATFKVPASFGPIGAVQVTNYHHSEMLLGDIEVFPTGQEESAVTFHCKSWIDPSHCTPDKRVFFPAHSYLPSQTPKGVEGLRKRELEILRGTGCGERK 250          

HSP 2 Score: 26.5646 bits (57), Expect = 1.832e-25
Identity = 14/49 (28.57%), Postives = 25/49 (51.02%), Query Frame = 3
Query:  504 KTYDRIYDL*CLQ*ILEDPEKKT*IYKGLCFGRQNKTPLFPKRCKTGRP 650
            K +DRIYD      +    +      + +  G+++    +P+RC+TGRP
Sbjct:  250 KEHDRIYDYDVYNDLGNPDDDNNPTTRPVLGGKEHP---YPRRCRTGRP 295          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.754e-25
Identity = 58/133 (43.61%), Postives = 82/133 (61.65%), Query Frame = 2
Query:  119 VSAELDPKTGLDK----STIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            VS E DP+ G  K    S +  +  K     +  + Y +EF V +GFGE GA+ V N H +E Y++ IV++G P GP + TCNSW+     ++ +RVFF+N+ YLPS+TP GL+  R  EL  LRG+G GER+
Sbjct:  106 VSTETDPRKGTPKKSKPSALVGWFDKKDVKAE-RVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERR 237          
BLAST of EY710652 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.316e-20
Identity = 48/131 (36.64%), Postives = 80/131 (61.07%), Query Frame = 2
Query:  119 VSAELDPKTGLDKSTIQDYARKI--GADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERK 505
            VS E+DP+TG  + +++     +         + + ++F VP  FG+ GAILV N    E+ L +I+++   +  +    N+W+HSK+DN Q R+ F ++  LPS+TPDG+K  R ++L  +RG+G+GERK
Sbjct:  120 VSEEIDPETGKGRKSLESPVMGLPKAVKDPRYLVFTADFTVPINFGKPGAILVTNLLSTEICLSEIIIEDSTD-TILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERK 249          

HSP 2 Score: 26.9498 bits (58), Expect = 3.316e-20
Identity = 21/55 (38.18%), Postives = 28/55 (50.91%), Query Frame = 3
Query:  492 KESAKTYDRIYDL*CLQ*ILEDPEKKT*IYKGLCFGRQNKTPLFPKRCKTGRPPV 656
            K   K ++RIYD       L DP K   +   L      +TP +P+RC+TGRP V
Sbjct:  245 KGERKPHERIYDYDVYN-DLGDPRKTERVRPVLGVP---ETP-YPRRCRTGRPLV 294          
The following BLAST results are available for this feature:
BLAST of EY710652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
LOXC2_ORYSJ1.667e-3039.11Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOXC1_ORYSJ2.844e-3039.56Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX6_ORYSJ1.933e-2846.67Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX23_HORVU3.476e-2842.60Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOX4_ARATH7.226e-2845.11Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOX3_ARATH7.227e-2844.36Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]
LOX2_ARATH6.390e-2642.52Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOX21_HORVU1.832e-2546.56Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX5_ORYSJ2.754e-2543.61Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]
LOX6_ARATH3.316e-2036.64Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-F07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710652 ID=EY710652; Name=EY710652; organism=Citrus sinensis; type=EST; length=989bp
AGTTAAGGCTGTTGTTACTGTGAAACCAACTGTGGGAGGCTTCCTCTCAA
ATATTTCTTTAGACCAAGGGTTAGATGATCTTGGAGATTTGTTTGGTAAA
TCACTCCTCTTGGAGCTTGTCAGTGCTGAGCTTGACCCCAAGACGGGATT
GGATAAATCCACCATCCAAGATTATGCGCGCAAAATTGGTGCGGACGGGG
ATGGAAACATGCAATATGAATCAGAATTCGAAGTCCCATCTGGATTTGGA
GAAATTGGCGCAATATTAGTGGAAAATGAGCACCACAAAGAGATGTATTT
GAAAGATATTGTTCTTGATGGTTTGCCAAATGGTCCTGTCAACGTAACAT
GTAATTCATGGCTTCACTCAAAGCACGACAATAAACAAAAGAGAGTTTTC
TTTACCAACAAGTTGTACTTGCCATCACAAACACCAGACGGATTGAAGAG
ATATAGAGCTGAGGAGCTTACCATTTTGCGAGGTAATGGACAAGGAGAGC
GCAAAAACCTATGATAGAATCTATGATTTATGATGTCTACAATGAATCTT
GGAAGATCCAGAAAAAAAAACCTGAATTTACAAAGGCCTGTGCTTTGGAA
GGCAAAACAAAACCCCTTTATTCCCTAAACGTTGCAAAACTGGACGCCCC
CCGGTGGTGGCCACGAATCATTTTTTCGGAAAAAAAAAAGGGGAACTTTT
TTTTGTTTCCCAGGGGGATGGAAACCTTTCTCCGGAAGGTAAAGGCCAAC
CTAAATTTTTCAGCCAAAAACGGGGGAACCCCGGGGTTGCCTGGCTTTGG
GTACCCTCCCCTTTAAAACCCCCCCTTTTGCACGATCCCGGTTTCGGGGG
GGTTTACCATACTTTTCCCTGTGGAATTGGGAAGCCCCCTCTCTTCAATG
GGAAAAGAGAGTCCCCTTTTTGCCCCGCCCCCCCCCACTAACAAAGGGAA
GGAGGGGGGTTTTTTTGTGGGGAAAACACACACCGCGCG
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