EY710649

Overview
NameEY710649
Unique NameEY710649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1103
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710649 vs. ExPASy Swiss-Prot
Match: PGAP3_MOUSE (Post-GPI attachment to proteins factor 3 OS=Mus musculus GN=Pgap3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.952e-16
Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 3
Query:   57 IQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHI---YGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYG 449
            IQEPAS   S+LN      G  S  +L  Y+  +  +       SP++H    + ++S+N+WFWS VFH+RD DLTEK DY  A A++  S+ L  +R+  ++  +      A LL  +T HI YL+    DYG
Sbjct:  102 IQEPASAVASLLN------GLASLVMLCRYRASVPAS-------SPMYHTCMAFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSVYLCCVRTVGLQHPSVASAFGALLLLLLTGHISYLSLVHFDYG 222          
BLAST of EY710649 vs. ExPASy Swiss-Prot
Match: PGAP3_DANRE (Post-GPI attachment to proteins factor 3 OS=Danio rerio GN=pgap3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.952e-16
Identity = 49/142 (34.51%), Postives = 73/142 (51.41%), Query Frame = 3
Query:   24 YGRIPGRPTRPIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYG 449
            +G+ P       +EPAS   S+LN      G     +LL Y+  +      Y+  +     +  +S+N+WFWS VFH+RD  LTEK DY  A A++ +S+ L  +R+  +R  A   MV   L+   T+H+ YL F   DYG
Sbjct:   87 HGKWPFARFLCFEEPASALASLLN------GLACLLMLLRYRSAVPCQSPMYHTITA----FSLVSLNAWFWSTVFHTRDTYLTEKMDYFCASAVILYSIYLCCVRTLGLRRPAISSMVGVLLILAFTSHVSYLTFVSFDYG 218          
BLAST of EY710649 vs. ExPASy Swiss-Prot
Match: PGAP3_BOVIN (Post-GPI attachment to proteins factor 3 OS=Bos taurus GN=PGAP3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.947e-15
Identity = 49/142 (34.51%), Postives = 71/142 (50.00%), Query Frame = 3
Query:   24 YGRIPGRPTRPIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYG 449
            +G+ P       QEPAS   S LN      G  S  +L  Y+  +  +   Y    P    + ++S+N+WFWS VFH+RD DLTEK DY  A  ++  S+ L  +R+  ++  A      A LL  +T H+ YL+    DYG
Sbjct:   91 HGKWPFSRFLCFQEPASAVASFLN------GLASLVMLCRYRTSVPASSPMY----PTCVAFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAMASAFRALLLLLLTAHVSYLSLIHFDYG 222          
BLAST of EY710649 vs. ExPASy Swiss-Prot
Match: PGAP3_HUMAN (Post-GPI attachment to proteins factor 3 OS=Homo sapiens GN=PGAP3 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 6.732e-15
Identity = 48/133 (36.09%), Postives = 71/133 (53.38%), Query Frame = 3
Query:   60 QEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHI---YGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYG 449
            QEPAS   S LN      G  S  +L  Y+  +  +       SP++H    + ++S+N+WFWS VFH+RD DLTEK DY  A  ++  S+ L  +R+  ++  A      A LL  +T H+ YL+  + DYG
Sbjct:  103 QEPASAVASFLN------GLASLVMLCRYRTFVPAS-------SPMYHTCVAFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFRALLLLMLTVHVSYLSLIRFDYG 222          
BLAST of EY710649 vs. ExPASy Swiss-Prot
Match: PGAP3_CRIGR (Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus GN=PGAP3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.500e-14
Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 3
Query:   57 IQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHI---YGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 446
            IQEPAS   S+LN      G  S  +L  Y+  +  +       SP++H    + ++S+N+WFWS VFH+RD DLTEK DY  A A++  S+ L  +R+  ++  +      A LL  +  H  YL+  + DY
Sbjct:  102 IQEPASAVASLLN------GLASLVMLCRYRASVPAS-------SPMYHTCMAFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSIYLCCVRTVGLQHPSVARAFGATLLLMLLLHTSYLSLVRFDY 221          
BLAST of EY710649 vs. ExPASy Swiss-Prot
Match: PGAP3_DROME (Post-GPI attachment to proteins factor 3 OS=Drosophila melanogaster GN=CG3271 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.828e-13
Identity = 43/141 (30.50%), Postives = 71/141 (50.35%), Query Frame = 3
Query:   24 YGRIPGRPTRPIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 446
            YG+ P      +QEPASV FS LN  +H        +L  ++  ++     Y     L HI+   S+N W WSA+FH+RD  LTE  DY+ A +++  SL + ++R  +      R ++    L++   +  YL+  + +Y
Sbjct:   98 YGKWPFLRLLGMQEPASVIFSCLNFVVHLR------LLRKFRREVRPDSPCYM----LTHIFAVTSLNGWIWSAIFHTRDFPLTELLDYAFAYSIILCSLYVMVMRMLHRYSLFLRGVITLAFLSYYINYFAYLSVGRFNY 228          
BLAST of EY710649 vs. ExPASy Swiss-Prot
Match: PGAP3_XENTR (Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis GN=pgap3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.647e-11
Identity = 42/129 (32.56%), Postives = 65/129 (50.39%), Query Frame = 3
Query:   60 QEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 446
            QEPAS   S LN      G  S  +LL Y+  +  + + Y         +  +S+N+WFWS +FH+RD  LTEK DY  A +++  S+ L  +R+F ++  +      A L+     H+ YL   + DY
Sbjct:   98 QEPASALASFLN------GVASLLMLLRYRSSVPSSCQMYRTCLA----FSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGLQYPSIANGFGAFLVLLFACHVSYLTLGRFDY 216          
BLAST of EY710649 vs. ExPASy Swiss-Prot
Match: PGAP3_XENLA (Post-GPI attachment to proteins factor 3 OS=Xenopus laevis GN=pgap3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.458e-11
Identity = 42/129 (32.56%), Postives = 64/129 (49.61%), Query Frame = 3
Query:   60 QEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 446
            QEPAS   S LN      G  S  +L  Y+  +  + + Y         +  +S+N+WFWS +FH+RD  LTEK DY  A +++  S+ L  +R+F ++  +      A L+     HI YL   + DY
Sbjct:   98 QEPASALASFLN------GVASLLMLFRYRSSVPSSCQMYRTCLA----FSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGLQYPSIANAFGAFLVLLFACHISYLTLGRFDY 216          
BLAST of EY710649 vs. ExPASy Swiss-Prot
Match: PER1_SCHPO (Protein PER1 homolog OS=Schizosaccharomyces pombe GN=SPAC823.07 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.516e-11
Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 3
Query:   57 IQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGF----SLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYG 449
            IQE  SV FS+LN  +H++G+      +  + P K+   +       W I G   MN+W WS+VFH RD  +TEK DY SA A + F    +LIL +        +    ++    +A    H+ YL+FY  DYG
Sbjct:  104 IQELFSVFFSMLNFMIHYNGYHIMRRCIPDEHPAKRLCLS-------WAIVG---MNAWVWSSVFHIRDTPITEKLDYFSAGAFVLFGSYCTLILMLRLDQLPGGKLLCWIIGVIFIAAFIAHVSYLSFYSFDYG 228          
The following BLAST results are available for this feature:
BLAST of EY710649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PGAP3_MOUSE7.952e-1637.31Post-GPI attachment to proteins factor 3 OS=Mus mu... [more]
PGAP3_DANRE7.952e-1634.51Post-GPI attachment to proteins factor 3 OS=Danio ... [more]
PGAP3_BOVIN3.947e-1534.51Post-GPI attachment to proteins factor 3 OS=Bos ta... [more]
PGAP3_HUMAN6.732e-1536.09Post-GPI attachment to proteins factor 3 OS=Homo s... [more]
PGAP3_CRIGR1.500e-1435.34Post-GPI attachment to proteins factor 3 OS=Cricet... [more]
PGAP3_DROME2.828e-1330.50Post-GPI attachment to proteins factor 3 OS=Drosop... [more]
PGAP3_XENTR2.647e-1132.56Post-GPI attachment to proteins factor 3 OS=Xenopu... [more]
PGAP3_XENLA3.458e-1132.56Post-GPI attachment to proteins factor 3 OS=Xenopu... [more]
PER1_SCHPO4.516e-1134.81Protein PER1 homolog OS=Schizosaccharomyces pombe ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-F03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710649 ID=EY710649; Name=EY710649; organism=Citrus sinensis; type=EST; length=1103bp
TTAAATTTTTATAGGGAACGCAGTACGGTCGGATTCCGGGTCGACCCACG
CGTCCGATACAGGAGCCTGCTTCTGTGGCTTTCTCCGTTCTCAACCTTGC
AATGCATTTCCATGGTTGGCTGTCATTTTTCATCCTTCTGTACTACAAGT
TGCCTCTAAAACAAACGAAGAAGGCATACTATGAATTTTCCCCTTTGTGG
CATATCTATGGGTTCTTGTCAATGAATTCCTGGTTCTGGAGTGCAGTTTT
CCACAGTAGAGATGTGGACTTGACAGAGAAGTTTGACTACTCATCTGCTG
TGGCATTACTTGGGTTCTCGCTCATTCTGGCGATACTAAGAAGTTTCAAC
GTGAGAGATGAGGCTGCTAGAGTCATGGTTGCTGCTCCACTGCTCGCTTT
TGTGACAACCCATATATTGTACCTCAATTTCTATAAACTAGATTATGGTA
TCAGACCTCTCTGTCTATATCTTCATTTCTGATTGATGCTTAAGCCAATC
ATTAGCCTATATCTTGGTAAATACATCACGTCATTACCCCAGGTCTCATA
AAGCTAAGGTTGTCGTAAACCACTTAATGGTCAGTTTGTACAAACCCAAC
CCTTGCCTGTTTTTGTTTACTAATGGGATAAATATGCTGAATGAAGTATG
GCTATTGCTTTTAACAGTTACCTTATATCCAATAAAGACACCCAAAAAAT
CCTTTGTTTTTTCTTTTCCATTTCCTTTTTTTTTTTTTCCCAAACCCCTT
TGGAATTGCAAATTTTATCACCCTTATGGGTTCCAATGGAAAAATTTAAA
AAAAAAACCCTTGGAATTTTAAAAGGGGGGAAAAAGAAAAGGTTGGGGGT
TGTGCCAAGGGGAAGGGGGCTCACTTTCTCTCCCGGGGGGAAAATTGGGG
GGGGGAAACCCCCCAGGGACCTCTTTCCCCCCTAAAAAAATGGGGGGGGG
GGGAGGGGATACGAGAGAGGAACCGACACCTAACAAGAGAATGTCATACA
ATAAAATACCATTACAATTTTTCTCCCGCCCACCCGCACTACATTATGAC
CGGGGATTNATAGGTGCCGGGGGGAAGATATGGGTGCCGCACNCACGCAG
CAC
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