EY710545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: NOP56_SCHPO (Nucleolar protein 56 OS=Schizosaccharomyces pombe GN=nop56 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 2.604e-63 Identity = 119/210 (56.67%), Postives = 156/210 (74.29%), Query Frame = 1 Query: 22 RIPGNTEAVRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETK-IPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDKSKLTEDMV 648 +I T+ V+ S+ D+++FGKVVQL +F PF++A AL N +SEG++ + L+NFLELNLPK KK K SLGV + + + I E I C ++E +LLRG+R H D+ +K L PGD E+AQLGLGHSYSRAKVKFNVNR DNM+IQAI +LD LDKDIN+F+MR++EWYSWHFPEL KIV DNY YA IV L+ DK+ + ++M+ Sbjct: 23 QIAAKTKEVQLSLQDISKFGKVVQLRSFIPFKNAAHALENANDISEGVLNDFLKNFLELNLPKAS--KKKKVSLGVQDKNLATSIKSEIDAIECDTSELTQDLLRGIRFHGDKLLKQLSPGDFERAQLGLGHSYSRAKVKFNVNRNDNMIIQAIAILDQLDKDINTFAMRMKEWYSWHFPELSKIVGDNYKYAVIVTLVGDKTTINDEML 230 HSP 2 Score: 23.8682 bits (50), Expect = 2.604e-63 Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 674 DKDKAKEIVEAGKSIMGKGFAGV 742 DKD A+ I+ AGK MG+ + + Sbjct: 240 DKDIAQSIINAGKVSMGQDISEI 262
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: NOP56_HUMAN (Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4) HSP 1 Score: 216.853 bits (551), Expect = 1.632e-55 Identity = 112/207 (54.11%), Postives = 144/207 (69.57%), Query Frame = 1 Query: 46 VRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDKSKLTEDMVPAFKKI 666 V S+ ++ +F +V+L AF PF S+ AL N+VSEG++ +LR LE +LP KK K LGV +PKIG+ I EE CQ+ + E+LRGVRLHF +K L KAQLGLGHSYSRAKVKFNVNRVDNM+IQ+I LLD LDKDIN+FSMRVREWY +HFPELVKI+NDN Y R+ + I ++ +L ED + +++ Sbjct: 32 VEESVLNLGKFHSIVRLVAFCPFASSQVALENANAVSEGVVHEDLRLLLETHLPS----KKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEDKLEKLEEL 234
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: NOP56_YEAST (Nucleolar protein 56 OS=Saccharomyces cerevisiae GN=NOP56 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.783e-55 Identity = 106/207 (51.21%), Postives = 145/207 (70.05%), Query Frame = 1 Query: 25 IPGNTEAVRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETK-IPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDKSKLTED 642 I + V+ I+D F K+++L +F PF+ A +AL N +SEGL++ L+ L+LNLPK KK +L +S+ +G I EE + C SNE +L+RGVRLH ++ K L+ GDLE+AQLGLGH+YSRAKVKF+V + DN +IQAI LLD LDKDIN+F+MRV+EWY WHFPEL K+V DNY +A++V I+DK+ L +D Sbjct: 27 IGSRLKEVQEQINDFGAFTKLIELVSFAPFKGAAEALENANDISEGLVSESLKAILDLNLPKASS-KKKNITLAISDKNLGPSIKEEFPYVDCISNELAQDLIRGVRLHGEKLFKGLQSGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYTFAKLVLFIKDKASLNDD 232
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: NOP56_MACFA (Nucleolar protein 56 OS=Macaca fascicularis GN=NOP56 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 4.747e-55 Identity = 111/207 (53.62%), Postives = 144/207 (69.57%), Query Frame = 1 Query: 46 VRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDKSKLTEDMVPAFKKI 666 V S+ ++ +F +V+L AF PF S+ AL N+VSEG++ +LR LE +LP KK K LGV +PKIG+ I EE CQ+ + E+LRGVRLHF +K L KAQLGLGHSYSRAKVKFNVNRVDNM+IQ+I LLD LDKDIN+FSMRVREWY +HFPELVKI+NDN Y R+ + I ++ +L E+ + +++ Sbjct: 32 VEESVLNLGKFHNIVRLVAFCPFASSQVALENANAVSEGVVHEDLRLLLETHLPS----KKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEEKLEKLEEL 234
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: NOP56_PONAB (Nucleolar protein 56 OS=Pongo abelii GN=NOP56 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.058e-54 Identity = 110/207 (53.14%), Postives = 143/207 (69.08%), Query Frame = 1 Query: 46 VRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDKSKLTEDMVPAFKKI 666 V S+ ++ +F +V+L AF PF S+ AL N+VSEG++ +LR LE +LP KK + LGV +PKIG+ I EE CQ+ + E+LRGVRLHF +K L KAQLGLGHSYSR KVKFNVNRVDNM+IQ+I LLD LDKDIN+FSMRVREWY +HFPELVKI+NDN Y R+ + I ++ +L ED + +++ Sbjct: 32 VEESVLNLGKFHNIVRLVAFCPFASSQVALENANAVSEGVVHEDLRLLLETHLPS----KKKRVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRTKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEDKLEKLEEL 234
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: NOP56_MOUSE (Nucleolar protein 56 OS=Mus musculus GN=Nop56 PE=1 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 1.058e-54 Identity = 113/207 (54.59%), Postives = 142/207 (68.60%), Query Frame = 1 Query: 46 VRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDKSKLTEDMVPAFKKI 666 V + ++ +F VV+L AF PF S+ AL N+VSEG++ +LR LE LP KK K LGV +PKIG+ I EE CQ+ + E+LRGVRLHF +K L KAQLGLGHSYSRAKVKFNVNRVDNM+IQ+I LLD LDKDIN+FSMRVREWY +HFPELVKIVNDN Y R+ + I ++ +L E+ + ++I Sbjct: 32 VEECVLNLGKFHNVVRLVAFCPFSSSQVALENANAVSEGVVHEDLRLLLETYLPS----KKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIVNDNATYCRLAQFIGNRRELNEEKLEKLEEI 234
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: NOP56_BOVIN (Nucleolar protein 56 OS=Bos taurus GN=NOP56 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.381e-54 Identity = 110/207 (53.14%), Postives = 143/207 (69.08%), Query Frame = 1 Query: 46 VRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDKSKLTEDMVPAFKKI 666 V + ++ +F +V+L AF PF S+ AL N+VSEG++ +LR LE +LP KK K LGV +PKIG+ I EE CQ+ + E+LRGVRLHF +K L KAQLGLGHSYSRAKVKFNVNRVDNM+IQ+I LLD LDKDIN+FSMRVREWY +HFPELVKI+NDN Y R+ + I ++ +L E+ + +++ Sbjct: 32 VEECVLNLGKFHNIVRLVAFCPFSSSQVALENANAVSEGVVHEDLRLLLETHLPP----KKKKVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRKELNEEKLEKLEEL 234
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: NOP56_DICDI (Nucleolar protein 56 OS=Dictyostelium discoideum GN=nop56 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 4.913e-52 Identity = 105/211 (49.76%), Postives = 144/211 (68.25%), Query Frame = 1 Query: 37 TEAVRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDKSKLTEDMVPAFKKIL 669 T+ V+ S+ D ++F KV ++ PF SA +AL NS+SEG++T L +FL+ K EG LGV + K+ + I +E KI C SN E++R +R H F K LK DL KAQLGLGHSYSR+KVKFNV++VDNM+IQ+I LL+ LDKD+N+F MR+REWYSWHFPEL+KI+ +A++ KLI++K LTE+ + K+IL Sbjct: 28 TDQVQKSMQDFSKFSKVCKMVGSLPFTSAENALENINSISEGILTESLHDFLKQTFSKKTEG----VVLGVCDNKLSASIGDELKISCLSNSHTSEIIRCIRNHISEFTK-LKSADLLKAQLGLGHSYSRSKVKFNVHKVDNMIIQSICLLEQLDKDLNTFFMRLREWYSWHFPELLKIIESQVHFAKLAKLIQNKKNLTEESLDEIKEIL 233
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: YZVL_CAEEL (Uncharacterized NOP5 family protein K07C5.4 OS=Caenorhabditis elegans GN=K07C5.4 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 3.084e-46 Identity = 95/202 (47.03%), Postives = 136/202 (67.33%), Query Frame = 1 Query: 40 EAVRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEE-TKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDKSKLTED 642 + V ++ +D +F ++V+L +F PF++ AL CNS+SEGL +L NFL+ +LPK KK LG+++ K+ + E + + E+LRG R+HF+R K+L L KAQL LGHSYSR+KVKF+V+RVDNMVIQ+I LLD LDKDIN F MR+REWYS+H+PEL ++ D Y Y+R+ I D++K+ E+ Sbjct: 32 QEVDAAHADGYKFSQIVELASFDPFKNTEAALENCNSISEGLAHPDLTNFLQKSLPK----KKKHVVLGINDSKLAGSLTEAFPDLKLVFGGVITEILRGTRVHFERLAKNLPHHSLSKAQLSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDKDINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAEN 229
BLAST of EY710545 vs. ExPASy Swiss-Prot
Match: NOP5B_ARATH (Probable nucleolar protein 5-2 OS=Arabidopsis thaliana GN=NOP5-2 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.038e-38 Identity = 85/181 (46.96%), Postives = 119/181 (65.75%), Query Frame = 1 Query: 82 KVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARIVKLIEDK 624 K+V+L AF F++ +AL + EG + LR FL+ N +G+ +L V++ K+G+ I E+ KI C N V+ELLRGVR F I L DL LGL HS +R K+KF+ ++VD M+IQAI LLD LDK++N+++MRVREWY WHFPEL KI++DN LYA+ VKL+ ++ Sbjct: 41 KMVKLKAFEKFDNTSEALEAVAKLLEGAPSKGLRKFLKANC----QGE----TLAVADSKLGNVIKEKLKIDCIHNNAVMELLRGVRSQFTELISGLGDQDLAPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILYAKSVKLMGNR 213 The following BLAST results are available for this feature:
BLAST of EY710545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710545 ID=EY710545; Name=EY710545; organism=Citrus sinensis; type=EST; length=1052bpback to top |