EY710541

Overview
NameEY710541
Unique NameEY710541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1000
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: U326_ARATH (UPF0326 protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.718e-65
Identity = 101/135 (74.81%), Postives = 118/135 (87.41%), Query Frame = 2
Query:  146 TKEQNSRGSNHALL---YLNVYDLTPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTSGVFEVEPKSCPGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            + ++    S  A L   YLNVYDLTP+NNYLYWFG+GIFHSGIEAH LEY +GAHEY TSGV+EVEP++CPGFIFRRSVLLGTT++SR++FRS+ME LS KYHGDTYHLIAKNCNHFTE+VC+QLTGK IPGW+N
Sbjct:   12 SSDERDESSGEAALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWIN 146          

HSP 2 Score: 47.7506 bits (112), Expect = 1.718e-65
Identity = 21/34 (61.76%), Postives = 29/34 (85.29%), Query Frame = 3
Query:  543 RMARLGSFCNCLLAKNIQITAVAPLPDRPTNSEE 644
            R+AR+GSFCNCLL ++IQ+TAV+ LP+R   S+E
Sbjct:  147 RLARVGSFCNCLLPESIQLTAVSALPERLEFSDE 180          
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: PPDE1_RAT (PPPDE peptidase domain-containing protein 1 OS=Rattus norvegicus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.103e-24
Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 2
Query:  167 GSNHALLYLNVYDLTPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTSGVFEVEPKSC----PGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            G+N  L+ LNVYD+  +N Y    G+G+FHSGIE +G E+ +G H Y  SG+FE+ P +       F F+ +V+LG+T+    +    +E L  +Y G+ YHL+ KNCNHF+  +   L GK IP W+N
Sbjct:    2 GANQ-LVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAAELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: PPDE1_PONAB (PPPDE peptidase domain-containing protein 1 OS=Pongo abelii GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.103e-24
Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 2
Query:  167 GSNHALLYLNVYDLTPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTSGVFEVEPKSC----PGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            G+N  L+ LNVYD+  +N Y    G+G+FHSGIE +G E+ +G H Y  SG+FE+ P +       F F+ +V+LG+T+    +    +E L  +Y G+ YHL+ KNCNHF+  +   L GK IP W+N
Sbjct:    2 GANQ-LVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: PPDE1_PIG (PPPDE peptidase domain-containing protein 1 OS=Sus scrofa GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.103e-24
Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 2
Query:  167 GSNHALLYLNVYDLTPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTSGVFEVEPKSC----PGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            G+N  L+ LNVYD+  +N Y    G+G+FHSGIE +G E+ +G H Y  SG+FE+ P +       F F+ +V+LG+T+    +    +E L  +Y G+ YHL+ KNCNHF+  +   L GK IP W+N
Sbjct:    2 GANQ-LVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: PPDE1_MOUSE (PPPDE peptidase domain-containing protein 1 OS=Mus musculus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.103e-24
Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 2
Query:  167 GSNHALLYLNVYDLTPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTSGVFEVEPKSC----PGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            G+N  L+ LNVYD+  +N Y    G+G+FHSGIE +G E+ +G H Y  SG+FE+ P +       F F+ +V+LG+T+    +    +E L  +Y G+ YHL+ KNCNHF+  +   L GK IP W+N
Sbjct:    2 GANQ-LVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: PPDE1_HUMAN (PPPDE peptidase domain-containing protein 1 OS=Homo sapiens GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.103e-24
Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 2
Query:  167 GSNHALLYLNVYDLTPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTSGVFEVEPKSC----PGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            G+N  L+ LNVYD+  +N Y    G+G+FHSGIE +G E+ +G H Y  SG+FE+ P +       F F+ +V+LG+T+    +    +E L  +Y G+ YHL+ KNCNHF+  +   L GK IP W+N
Sbjct:    2 GANQ-LVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: PPDE1_CHICK (PPPDE peptidase domain-containing protein 1 OS=Gallus gallus GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.912e-24
Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = 2
Query:  182 LLYLNVYDLTPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTSGVFEVEPKSC----PGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            L+ LNVYD+  +N Y    G+G+FHSGIE +G E+ +G H Y  SG+FE+ P +       F F+ +V+LG+T+    +    +E L  ++ G+ YHL+ KNCNHF+  +   L GK IP WVN
Sbjct:    5 LVILNVYDMYWMNEYTSSLGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFMEDDIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVN 128          
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: PPDE1_XENLA (PPPDE peptidase domain-containing protein 1 OS=Xenopus laevis GN=pppde1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.011e-23
Identity = 51/123 (41.46%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  185 LYLNVYDLTPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTSGVFEVEPKSC----PGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            + LNVYD+  +N Y    G+G+FHSGI+ +G E+ +G H Y  SGVFE+ P         F F+ ++ LG+T+ +  +    +E L  +Y G+ YHL+ KNCNHF+  +   L GK IP WVN
Sbjct:    6 IILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVN 128          
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: PPDE1_DANRE (PPPDE peptidase domain-containing protein 1 OS=Danio rerio GN=pppde1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.702e-22
Identity = 48/121 (39.67%), Postives = 74/121 (61.16%), Query Frame = 2
Query:  191 LNVYDLTPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTSGVFEVEPKSC----PGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            LNVYD+  +N +    G+G+FHSGIE +G E+ +G H Y  SG+FE+ P         F F+ +++LG+T+ +  +    +E +  +Y G+ YHL+ KNCNHF+  +   L G+ IP WVN
Sbjct:    8 LNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGETFKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPRWVN 128          
BLAST of EY710541 vs. ExPASy Swiss-Prot
Match: HAG1_SCHPO (UPF0326 protein hag1 OS=Schizosaccharomyces pombe GN=hag1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.813e-17
Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = 2
Query:  185 LYLNVYDL---TPLNNYLYWFGLGIFHSGIEAHGLEYGFGAHEYRTS-GVFEVEPKS-CPGFIFRRSVLLGTTNLSRAEFRSFMEHLSGKYHGDTYHLIAKNCNHFTEKVCMQLTGKCIPGWVN 541
            +Y+NVYDL   +P+N   +  GLGI+H+G+   G EY FGAHE   S GVF   P+    G  +R S+ L    L + +    +  LS ++ G +Y L+ +NCNHFT    ++LTG  IP ++N
Sbjct:    3 VYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPLEGCRWRCSIALPNCTLPKPDVDRILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTGSPIPSFLN 126          
The following BLAST results are available for this feature:
BLAST of EY710541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
U326_ARATH1.718e-6574.81UPF0326 protein At4g17486 OS=Arabidopsis thaliana ... [more]
PPDE1_RAT3.103e-2441.86PPPDE peptidase domain-containing protein 1 OS=Rat... [more]
PPDE1_PONAB3.103e-2441.86PPPDE peptidase domain-containing protein 1 OS=Pon... [more]
PPDE1_PIG3.103e-2441.86PPPDE peptidase domain-containing protein 1 OS=Sus... [more]
PPDE1_MOUSE3.103e-2441.86PPPDE peptidase domain-containing protein 1 OS=Mus... [more]
PPDE1_HUMAN3.103e-2441.86PPPDE peptidase domain-containing protein 1 OS=Hom... [more]
PPDE1_CHICK6.912e-2441.94PPPDE peptidase domain-containing protein 1 OS=Gal... [more]
PPDE1_XENLA2.011e-2341.46PPPDE peptidase domain-containing protein 1 OS=Xen... [more]
PPDE1_DANRE1.702e-2239.67PPPDE peptidase domain-containing protein 1 OS=Dan... [more]
HAG1_SCHPO2.813e-1739.52UPF0326 protein hag1 OS=Schizosaccharomyces pombe ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-D05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710541 ID=EY710541; Name=EY710541; organism=Citrus sinensis; type=EST; length=1000bp
TCTCTCTCTCTCTTTCTCCGATCACAGCTCAATTTGATCTCTCTTTGATG
TATGATGATGAGCTGCTGATTTAGAATTAAACCATTTGGGGGAGTGGTTT
CTGAATACAATGCGGTTCTTCTCGTCAAGCTCAAGCTTTAGTCTGACAAA
GGAGCAGAATAGCAGAGGGAGCAATCATGCATTGTTGTATCTCAATGTCT
ATGATCTTACACCACTGAACAACTACCTTTACTGGTTTGGGCTCGGGATA
TTCCATTCGGGTATCGAAGCTCATGGTTTGGAATATGGCTTTGGTGCTCA
TGAGTACCGTACCAGTGGAGTTTTTGAAGTTGAACCGAAAAGTTGTCCTG
GCTTCATCTTCAGACGGTCAGTGTTGCTGGGTACCACCAACCTGTCTCGT
GCAGAATTTCGCTCCTTCATGGAACACCTTTCTGGAAAATATCATGGGGA
CACTTATCATTTGATTGCCAAGAATTGTAACCATTTTACAGAAAAAGTCT
GTATGCAGCTAACTGGAAAGTGTATTCCAGGATGGGTTAATCCGGATGGC
TCGATTAGGTTCATTCTGCAATTGTCTGCTGGCCAAAAATATTCAAATCA
CAGCAGTTGCACCTCTTCCTGATCGTCCCACAAATTCCGAAGAATAAAAA
ATTGGAAATCCCCCCCATCTTCTAAAAAAGCAAAAAAGGAAAAAAAAAGA
AGGGGGCGATTCCTTCTTCTGTTGAACGGCCCCAAAAAGGGGAGGGGGGT
TTTTCAAAAAAAAAAAAACCAGGGGAGGGGAAAAAAAGGAAAACAAAGGG
GGTTTTTTTTTTTTCTCCCCCCAATATTCCCCCTCTTTTAGGGTTGGGGG
ATTCTTCCGGGGTGGTGGGGTTTGTGGAAATTGTGGAAACAAAAAAAAAA
ACTCCACCCCCGTTTATTAAGAGGGGACACTCGTGTGTGGTCCCCCACCA
TTTTTTAATTTTTTTTAAAGACTCACCCCCCCCGGGGGGTATCTTCTATT
back to top