EY710521

Overview
NameEY710521
Unique NameEY710521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length974
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710521 vs. ExPASy Swiss-Prot
Match: BH047_ARATH (Transcription factor bHLH47 OS=Arabidopsis thaliana GN=BHLH47 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.629e-28
Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:   48 MGSESSASLDEEVNVMVVDASVDGHCPTKKNKSRVPKRVHKAEREKLKREHLNDLFLDLANAVEVNQPNNGKACVLNEAARLLKDLFSQIESLNKENASLLSESHYVT 371
            M S++ ++  +E N     A+ D  C     K +VPKR++KA RE+LKREHLN+LF++LA+ +E+NQ N+GKA +L EA R LKD+F QIESL KE+ASLLSES YVT
Sbjct:    1 MVSKTPSTSSDEAN-----ATADERC----RKGKVPKRINKAVRERLKREHLNELFIELADTLELNQQNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVT 99

HSP 2 Score: 36.965 bits (84), Expect = 2.629e-28
Identity = 31/87 (35.63%), Postives = 37/87 (42.53%), Query Frame = 1 
Query:  430 LQSELHARVVQSKPDLNIPP---------EFQQPELSSHFPG----DSYGFSCCWKTNTISSRLLSLAPPSFPNLQLIQHLKVAQLP 651
            LQ+E+ AR  QSKPDLN  P         + Q PE  S FPG       GF     T    + +L L     P  Q I  +  AQ P
Sbjct:  119 LQNEIEARANQSKPDLNTSPAPEYHHHHYQQQHPERVSQFPGLPIFQGPGFQQSATTLHPPATVLVLPIQPDPQTQDISEMTQAQQP 205
The following BLAST results are available for this feature:
BLAST of EY710521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BH047_ARATH2.629e-2854.63Transcription factor bHLH47 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-B07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710521 ID=EY710521; Name=EY710521; organism=Citrus sinensis; type=EST; length=974bp
CGAGGATTTTGCACAGGGATTCCATCTCAAACTCATTTGAGACAGGCATG
GGTTCTGAGTCTTCTGCTTCCTTGGATGAAGAGGTCAACGTCATGGTGGT
GGATGCATCAGTAGATGGGCATTGTCCGACCAAAAAGAATAAGAGCAGAG
TTCCTAAACGAGTTCACAAGGCTGAGAGGGAGAAACTGAAGCGCGAGCAT
TTGAATGATCTCTTTCTTGATCTTGCCAATGCTGTTGAAGTGAATCAGCC
AAACAATGGAAAGGCCTGTGTGTTGAATGAAGCAGCTAGACTATTGAAGG
ACTTGTTTAGCCAGATTGAGTCACTAAATAAGGAGAATGCATCTCTCTTG
TCTGAATCTCACTACGTCACCATTGAGAAGAATGAATTGAAGGAGGAAAA
TTCTTCTCTTGAATCTCAAAATTGAAGTTCTGCAAAGCGAACTACATGCA
AGGGTGGTACAATCTAAACCTGACTTGAATATACCTCCTGAATTTCAGCA
ACCAGAATTGTCTTCACATTTCCCGGGAGATAGCTATGGGTTTTCCTGCT
GCTGGAAAACCAACACTATCTCAAGCCGCCTGCTGTCCTTGGCGCCCCCC
TCCTTTCCGAACCTTCAACTTATTCAGCATCTGAAGGTGGCTCAACTCCC
ATCTAAACCCGCCTCAATTGGAACCAAACCGCCAGGCTAGGGTATCCCAA
CCCGGGAAAATTCTGGGCCCTTCCCAATTTTTTTGGGGAAAACTTTTTCT
GATTATAAGGGGAAAAAGGGGGAAAAAAAAACAAATAAACTTTAAACCCT
TTGGTGCTCCCTTTTCCTTTTTTTTTTAATTTAATTTGGCGGGAATATTT
GGTAATTTTTTTGAGGGGGAAAGAAAGGGGGGGTGTTTTTTTTAGGGGGG
TTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AGGGGGGGGGGGGGGGCGCCCCCC
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