EY710517
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 9.342e-37 Identity = 78/172 (45.35%), Postives = 108/172 (62.79%), Query Frame = 1 Query: 13 FSSKYPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASGXXXXXXXXALVLAGGPGSNGARVQGSQSDGESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRN 528 F+S+Y S K AK++ D T ++GYGFVRF DEN++ A+ EM G C RP+R+ +ATPK S + ++ P + Q ++ N+T+FVG L VS+E+L+ F FGEI+ VKIP GKGCGFVQF NR+ AE+A+ +LQG +G +RLSWGRN Sbjct: 206 FASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPK--SKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 9.048e-32 Identity = 74/172 (43.02%), Postives = 101/172 (58.72%), Query Frame = 1 Query: 13 FSSKYPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASGXXXXXXXXALVLAGGPGSNGARVQGSQSDGESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRN 528 F S YPS AK+I+D TG ++ YGFVRF E E+ A+ M G C RP+RI VA+PK + AL + SN Q S + N T+FVG L S++S++DL+ F FG IL++KIP GKGCGFVQ++ + AE A+ +QG +G +RL+WG N Sbjct: 202 FRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSRASIAADS---ALGIVPTSTSNRQPNQDLCSM-DPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 3.682e-25 Identity = 70/203 (34.48%), Postives = 106/203 (52.22%), Query Frame = 1 Query: 13 FSSKYPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPK-----------KASGXXXXXXXXALVLAGGPG--SNGARVQGSQSDGES------------------NNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRN 528 F ++Y S AK++ D TG +KGYGFV+F + +E+ A++EM GV+ + R +++ + + ++S + L+ G SNG G + + S NN T+F+G L S V++++LR F FG I+ VKIPVGK CGFVQ+ +R AE A+ +QG I VRLSWGR+ Sbjct: 183 FINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 8.222e-17 Identity = 58/180 (32.22%), Postives = 89/180 (49.44%), Query Frame = 1 Query: 34 VKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASGXXXXXXXXALVLAGGPGSNGARVQGSQSDGESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGR-NPGNKQWRG 552 V GA+VI + T R++GYG+V F +++ +A+ EM G RP+ D++T K P N R + + T+F+G L + + + E F++ GE++SV+IP KG G+VQF+N +DA+ AL LQG I + VRL + P N RG Sbjct: 194 VIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSK-------------------PAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSSPRPNNDGGRG 354
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.960e-16 Identity = 47/185 (25.41%), Postives = 88/185 (47.57%), Query Frame = 1 Query: 25 YPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASGXXXXXXXXALVLAGGPGSNGARVQGSQSDGESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRNPGNKQWRGDHSNHWKWG 579 + + A+V+ D TG++KGYGFV F ++ + A+ M G + R +R + AT K + + R + + N T++ G + S ++D+ +R+ FS FG+I+ +++ KG FV+F+ + A A+ + GT I V+ WG+ + ++ +WG Sbjct: 137 FGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQET----------NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWG 311
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.960e-16 Identity = 47/185 (25.41%), Postives = 88/185 (47.57%), Query Frame = 1 Query: 25 YPSVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASGXXXXXXXXALVLAGGPGSNGARVQGSQSDGESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRNPGNKQWRGDHSNHWKWG 579 + + A+V+ D TG++KGYGFV F ++ + A+ M G + R +R + AT K + + R + + N T++ G + S ++D+ +R+ FS FG+I+ +++ KG FV+F+ + A A+ + GT I V+ WG+ + ++ +WG Sbjct: 120 FGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQEN----------NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWG 294
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.551e-15 Identity = 53/191 (27.75%), Postives = 96/191 (50.26%), Query Frame = 1 Query: 34 VKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASGXXXXXXXXALVLAGGPGSNGARVQGSQ--SDGESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGR------NPGNKQWR-GDHSNHWKWG 579 + A+V+ D TG++KGYGFV F ++ + A+ +M G + R +R + AT K + SN ++ + S NN T++ G + S ++++ +R+ FS FG+I+ +++ KG FV+F++ + A A+ + GT I V+ WG+ NP +Q + G + +WG Sbjct: 132 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYE------------SNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWG 310
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 2.239e-14 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 298 ESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGR 525 + N T+FVG L ++ LR F FG IL+V+IP GK CGFV+F R DAE ++Q LQG +G +RLSWGR Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR 431
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 2.924e-14 Identity = 52/191 (27.23%), Postives = 96/191 (50.26%), Query Frame = 1 Query: 34 VKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVATPKKASGXXXXXXXXALVLAGGPGSNGARVQGSQSDGES--NNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGR------NPGNKQWR-GDHSNHWKWG 579 + A+V+ D TG++KGYGFV F ++ + A+ +M G + R +R + AT K + SN ++ + +S +N T++ G + S ++++ +R+ FS FG+I+ +++ KG FV+F + + A A+ + GT I V+ WG+ NP +Q + G + +WG Sbjct: 132 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYE------------SNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYGQWG 310
BLAST of EY710517 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.774e-11 Identity = 47/174 (27.01%), Postives = 82/174 (47.13%), Query Frame = 1 Query: 31 SVKGAKVIIDSNTGRTKGYGFVRFGDENERSRAMTEMNGVYCSSRPMRIDVA--TPKKASGXXXXXXXXALVLAGGP----GSNGARVQGSQSDGESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLS 516 +V+ +VI D TGR++G+GFV +E A + NG RP+R++ PK+ G + GP GS+G+ G G + ++VG L V D L FS+ G+++ ++ KG GFV + + ++ + A++ L G + + +R+S Sbjct: 116 NVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDG-----------FSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVS 278 The following BLAST results are available for this feature:
BLAST of EY710517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710517 ID=EY710517; Name=EY710517; organism=Citrus sinensis; type=EST; length=1003bpback to top |