EY710514

Overview
NameEY710514
Unique NameEY710514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710514 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.106e-44
Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = 3
Query:   45 LTDPNSNRNPIQSHLSFAFTHHYPMGFPANGSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVE 377
            L+D +S +  + S+    FT    +  P NG       LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KPTHVFNAAG+TGRPNVDWCESHK E
Sbjct:  349 LSDGSSEKKDVSSNTVQTFT----VVTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPE 455          

HSP 2 Score: 61.2326 bits (147), Expect = 8.106e-44
Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 1
Query:  370 RSKTIRTNVVGTLTLADVCRDKGLILINYAPGCIFKNDSGSPPRIRARLSRKEDTPKFCPIFSTPRTKAM 579
            + +TIR NV GTLTLADVCR+  L+++N+A GCIF+ D+  P        ++ED P F   F + +TKAM
Sbjct:  453 KPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGSGIGF-KEEDKPNFFGSFYS-KTKAM 520          
BLAST of EY710514 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.299e-42
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 3
Query:  135 GSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVE 377
            G     + LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KP+HVFNAAG+TGRPNVDWCESHK E
Sbjct:  372 GCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTE 452          

HSP 2 Score: 63.1586 bits (152), Expect = 7.299e-42
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 1
Query:  370 RSKTIRTNVVGTLTLADVCRDKGLILINYAPGCIFKNDSGSPPRIRARLSRKEDTPKFCPIFSTPRTKAM 579
            +++TIR NV GTLTLADVCR+  L+++N+A GCIF+ D+  P        ++ED P F   F + +TKAM
Sbjct:  450 KTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGF-KEEDKPNFTGSFYS-KTKAM 517          
BLAST of EY710514 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 9.510e-42
Identity = 62/93 (66.67%), Postives = 71/93 (76.34%), Query Frame = 3
Query:  102 THHYPMGFPANGSDAGSKP-LKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVE 377
            TH       +NG+    KP LKFLIYG+TGWIGGLLGK+C  Q I + YG GRLE+R+SL  DI +VKPTHVFN+AGVTGRPNVDWCESHK E
Sbjct:  367 THMVVPSQRSNGTP--QKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTE 457          

HSP 2 Score: 66.6254 bits (161), Expect = 9.510e-42
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 1
Query:  370 RSKTIRTNVVGTLTLADVCRDKGLILINYAPGCIFKNDSGSPPRIRARLSRKEDTPKFCPIFSTPRTKAM 579
            +++TIR NV GTLTLADVCR+ GL+++N+A GCIF+ D   P        ++EDTP F   F + +TKAM
Sbjct:  455 KTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGF-KEEDTPNFTGSFYS-KTKAM 522          
The following BLAST results are available for this feature:
BLAST of EY710514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RHM2_ARATH8.106e-4459.46Probable rhamnose biosynthetic enzyme 2 OS=Arabido... [more]
RHM3_ARATH7.299e-4270.37Probable rhamnose biosynthetic enzyme 3 OS=Arabido... [more]
RHM1_ARATH9.510e-4266.67Probable rhamnose biosynthetic enzyme 1 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-A12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710514 ID=EY710514; Name=EY710514; organism=Citrus sinensis; type=EST; length=996bp
CCACCCAACACACACACATAGATTCCAATCAATAGTACGAAATTCTAACA
GATCCAAATTCAAATCGAAATCCGATCCAGTCTCATCTCTCCTTTGCATT
CACTCACCATTACCCAATGGGTTTCCCAGCCAACGGCTCCGACGCCGGCT
CCAAGCCGCTCAAGTTTCTCATCTACGGCCGCACTGGCTGGATCGGGGGC
TTGCTCGGCAAGCTCTGCCAAGCTCAGTCCATTGACTTCACCTACGGCTC
CGGCCGCCTCGAGAACCGCGCCTCCCTCGAAGCCGACATCGCCGCCGTCA
AGCCCACCCACGTCTTCAACGCGGCCGGGGTGACCGGTAGGCCCAACGTC
GACTGGTGCGAATCGCATAAGGTCGAAGACCATACGGACTAATGTCGTCG
GCACCCTTACGCTTGCTGACGTCTGCAGAGACAAAGGTTTGATTCTCATT
AATTACGCCCCCGGCTGCATCTTCAAGAACGATTCCGGGTCACCCCCTCG
GATCCGGGCTCGGCTTTCAAGGAAGGAGGATACTCCGAAATTTTGTCCGA
TCTTTTCTACTCCCAGAACTAAGGCCATGGGTGGAAAAAATTTGCTCCAA
AAAATTTTTTTAAAAAAAAGCCTGAACTTTGCGTGGTAAGGAAGCCGATT
TCCATCAAATTTTAACCAATTCCTCGCCAATTTCCTCCAAAAAAATCCCC
TCCTATTTTAAAAAGGTTAGCAAAATTTTCCAAACCTTAAGGACTATCTT
TGGGGAAAAAACCTTTTTCTCCATTTTCCCTTTGAAAAGGGAGAAAAAAA
AAACCTCCTCCTGGAAAATTTTTGAAATTTTTTAAAAACACCCGGGGGGG
GGGGAGGGACCAAAAAAGAAAAATTTTGGGAAAAATATTAATAAGGGGGA
AAAAAAAAAAAACACCCCCACCTTACCATTTTAGGAAAAAAAATTTTTTA
TTCCTTGAGAAAGAAAAAAAAGGGAGGGAAAAAGGAGGGGGGATAA
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