EY710513

Overview
NameEY710513
Unique NameEY710513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1081
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1A_ONOVI (Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 4.879e-51
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            EADD+KRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILK MPDEARLLKA
Sbjct:   18 EADDDKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKA 105

HSP 2 Score: 38.1206 bits (87), Expect = 4.879e-51
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 3 
Query:  462 GGLDEKDDGADNDYFEFENEDIDKI 536
            GGLDE+ D A NDY EFE+EDIDKI
Sbjct:  122 GGLDEEMDTA-NDYIEFEDEDIDKI 145

HSP 3 Score: 27.7202 bits (60), Expect = 4.879e-51
Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 2 
Query:  419 GELPESTRLNEGI 457
            GELP++TRLNEGI
Sbjct:  107 GELPDNTRLNEGI 119
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1A_WHEAT (Eukaryotic translation initiation factor 1A OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 2.671e-45
Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            EADD+KRELVFKEDGQEYAQV RMLGNGRCEA+C+DGTKRLCHIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKA
Sbjct:   18 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKA 105

HSP 2 Score: 30.4166 bits (67), Expect = 2.671e-45
Identity = 17/43 (39.53%), Postives = 28/43 (65.12%), Query Frame = 3 
Query:  414 LMVNFQRVPVSMRALLG-GLDEKDDG-ADNDYFEFENEDIDKI 536
            L+  +  +P ++R   G  +D  ++G  D+DY +FE+EDIDKI
Sbjct:  102 LLKAYGELPDTVRLNEGVDVDGPEEGEGDSDYIQFEDEDIDKI 144
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1AX_PONAB (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo abelii GN=EIF1AX PE=2 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.656e-34
Identity = 71/88 (80.68%), Postives = 76/88 (86.36%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKA
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKA 105
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1AX_MOUSE (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus GN=Eif1ay PE=2 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.656e-34
Identity = 71/88 (80.68%), Postives = 76/88 (86.36%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKA
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKA 105
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1AX_HUMAN (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo sapiens GN=EIF1AX PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.656e-34
Identity = 71/88 (80.68%), Postives = 76/88 (86.36%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKA
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKA 105
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1AY_PANTR (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Pan troglodytes GN=EIF1AY PE=2 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 3.690e-34
Identity = 70/88 (79.55%), Postives = 76/88 (86.36%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            E + EKRELVFKEDGQEYAQV++MLGNGR EA+C DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKA
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKA 105
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1AY_HUMAN (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Homo sapiens GN=EIF1AY PE=1 SV=4)

HSP 1 Score: 145.976 bits (367), Expect = 3.690e-34
Identity = 70/88 (79.55%), Postives = 76/88 (86.36%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            E + EKRELVFKEDGQEYAQV++MLGNGR EA+C DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKA
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKA 105
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1A_RAT (Eukaryotic translation initiation factor 1A OS=Rattus norvegicus GN=Eif1a PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 4.819e-34
Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG +RLCHIRGK+ KKVWI   DIIL+GLRDYQD+KADVILKY  DEAR LKA
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKA 105
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1A_MOUSE (Eukaryotic translation initiation factor 1A OS=Mus musculus GN=Eif1a PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 4.819e-34
Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            E + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG +RLCHIRGK+ KKVWI   DIIL+GLRDYQD+KADVILKY  DEAR LKA
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKA 105
[Close]
BLAST of EY710513 vs. ExPASy Swiss-Prot
Match: IF1A_RABIT (Eukaryotic translation initiation factor 1A OS=Oryctolagus cuniculus GN=EIF1A PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.312e-31
Identity = 68/88 (77.27%), Postives = 74/88 (84.09%), Query Frame = 1 
Query:  151 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKA 414
            E + EKRELVFKEDGQEYAQV++MLGNGR EAM  DG KRL HIRGK+ KKVWI   DIILVGLR+YQD+KADVILKY  DEAR LKA
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKA 105
The following BLAST results are available for this feature:
BLAST of EY710513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
IF1A_ONOVI4.879e-5197.73Eukaryotic translation initiation factor 1A OS=Ono... [more]
IF1A_WHEAT2.671e-4593.18Eukaryotic translation initiation factor 1A OS=Tri... [more]
IF1AX_PONAB1.656e-3480.68Eukaryotic translation initiation factor 1A, X-chr... [more]
IF1AX_MOUSE1.656e-3480.68Eukaryotic translation initiation factor 1A, X-chr... [more]
IF1AX_HUMAN1.656e-3480.68Eukaryotic translation initiation factor 1A, X-chr... [more]
IF1AY_PANTR3.690e-3479.55Eukaryotic translation initiation factor 1A, Y-chr... [more]
IF1AY_HUMAN3.690e-3479.55Eukaryotic translation initiation factor 1A, Y-chr... [more]
IF1A_RAT4.819e-3478.41Eukaryotic translation initiation factor 1A OS=Rat... [more]
IF1A_MOUSE4.819e-3478.41Eukaryotic translation initiation factor 1A OS=Mus... [more]
IF1A_RABIT1.312e-3177.27Eukaryotic translation initiation factor 1A OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710513 ID=EY710513; Name=EY710513; organism=Citrus sinensis; type=EST; length=1081bp
GGACCCGGGTTCCGGGATTCCCGGGTCGACCCCGCGTCCGTTCAATCTTG
CTGCTTTTTAACTCTCCGACTCCACCTCTCCCCCAAAGAATCAGAAACCA
TGCCGAAGAATAAGGGAAAGGGAGGAAAGAACAGGAAGAGGGGAAAGAAT
GAAGCTGACGACGAGAAGCGTGAGCTTGTCTTCAAGGAAGACGGACAGGA
ATATGCCCAAGTCCTTCGTATGCTCGGCAATGGTCGGTGTGAAGCTATGT
GCATCGATGGAACCAAGCGTCTTTGCCACATCCGTGGGAAGATGCACAAA
AAGGTTTGGATTGCAGCTGGTGATATAATACTTGTTGGCCTACGTGATTA
TCAGGATGACAAGGCTGATGTCATCCTCAAGTATATGCCCGACGAGGCAA
GGCTTCTGAAGGCTTAATGGTGAACTTCCAGAGAGTACCCGTCTCAATGA
GGGCATTGCTGGGTGGTCTTGATGAAAAGGATGATGGCGCTGATAATGAT
TACTTCGAGTTTGAAAACGAAGATATTGATAAGATCTAGGCTCCGAAAAA
CCGACCTCTGTCCGGGGGTTTAATGTTCAATATTTTAACAAAAAATGGAG
TATGCCAATGGAATTGGGTTAACTTAAAAACCTGAAAAAAAATGGGTTTG
AAGCCTTAAATTTTTGGAATTTTTAAAATGGGGGAGCCCTGCCATATTTT
CGGGGAAACGCCCAATAACCTTGGGTTAATTAATTTTTGTTTAATTCCCG
GGCCCTTTTTTTTGGAAAGGGGGATTTTTTCCAAAAAAGGGAAACCTTTA
AACCGGGGAGGGGGTGCAAAATTCATATAAAGGTCACAAATAAAAATATT
TGGGTGGGGGGAGTTTTCAAGGAAAAGACAGGGAAAAAAAAAATAAAAAA
AAAAAGGGGGGCGGGCGGGCCCTTTCATAGAGAGATCCGAAAGTATTTAC
ACGAGAGACGGGGGGGGAAGGGGGCAATACCATCCAAAATGCTCTTCTTT
TATTAATAGTAGGATCCCACACGAAATAATTTAACACCCTCTCCGCGGCG
GGGGGCGCGCCGCGCTACGCTTTTTATATCT
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