EY710510

Overview
NameEY710510
Unique NameEY710510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA1_ORYSJ (Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica GN=Os03g0711400 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 6.544e-86
Identity = 146/186 (78.49%), Postives = 163/186 (87.63%), Query Frame = 1
Query:    4 DSVQDAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKEQ 561
            D +QDAKKG GGSA+F+ARNRFAVL+KSSNQ             S LPIA DAI+YAGTGNLLC+AEDRV IFDLQQRL+LG+LQ P VKYVVWS+DMESVALLSKHA++IA+KKLVH+CTLHETIRVKSGAWD+NGVFIYTTLNHIKYCLPNGDSGII+TLDVPIYIT+V GN IFCLDRDGK +
Sbjct:  405 DYLQDAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNK 590          

HSP 2 Score: 36.965 bits (84), Expect = 6.544e-86
Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 2
Query:  551 GKNRAIVIDATEYIFKPVSIEEKNRTCHEPEKGTPHFGGRERLLILQQKGFP*NLLPLFGKKNKKNSDFNLGFKKGGKFQIGV 799
            GKN+ + +DA+EYIFK   + ++        K +    G+  +  LQQKGFP   + L   K++K + FNL   + G  QI V
Sbjct:  587 GKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNS-QLCGQAVISYLQQKGFP--EVALHFVKDEK-TRFNLAL-ESGNIQIAV 664          
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA2_ARATH (Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.873e-85
Identity = 168/232 (72.41%), Postives = 182/232 (78.45%), Query Frame = 1
Query:    4 DSVQDAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKEQGYSY*CNRIYF*ACLY*GKK*NLS*A*KRNSTLWG*GKIAYPAAKG 699
            D VQDAK+G GGSA+FIARNRFAVL+KS++Q             S LPI  DAIFYAGTGNLLCR+ED+VVIFDLQQRLVLG+LQTPFV+YVVWSNDMESVALLSKH IIIASKKLV QCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGK +  +       F   L   KK +   +  +NS L G   IAY   KG
Sbjct:  405 DVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYIFKLALL-RKKYDHVMSMIKNSQLCGQAMIAYLQQKG 635          
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA2_ORYSJ (Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica GN=Os03g0711500 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 2.471e-85
Identity = 145/186 (77.96%), Postives = 163/186 (87.63%), Query Frame = 1
Query:    4 DSVQDAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKEQ 561
            D +QDAKKG GGSA+F+ARNRFAVL+KSSNQ             S LPIA DAI+YAGTG+LLC+AEDRV IFDLQQRL+LG+LQ P VKYVVWS+DMESVALLSKHA++IA+KKLVH+CTLHETIRVKSGAWD+NGVFIYTTLNHIKYCLPNGDSGII+TLDVPIYIT+V GN IFCLDRDGK +
Sbjct:  405 DYLQDAKKGAGGSAVFVARNRFAVLEKSSNQVLVRNLKNEIVKKSPLPIATDAIYYAGTGSLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNK 590          

HSP 2 Score: 36.965 bits (84), Expect = 2.471e-85
Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 2
Query:  551 GKNRAIVIDATEYIFKPVSIEEKNRTCHEPEKGTPHFGGRERLLILQQKGFP*NLLPLFGKKNKKNSDFNLGFKKGGKFQIGV 799
            GKN+ + +DA+EYIFK   + ++        K +    G+  +  LQQKGFP   + L   K++K + FNL   + G  QI V
Sbjct:  587 GKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNS-QLCGQAVISYLQQKGFP--EVALHFVKDEK-TRFNLAL-ESGNIQIAV 664          
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA3_ORYSJ (Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica GN=Os09g0127800 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 7.155e-85
Identity = 143/186 (76.88%), Postives = 162/186 (87.10%), Query Frame = 1
Query:    4 DSVQDAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKEQ 561
            D +Q+AKKG GGSA+F+ARNRFAVL+KSSNQ             S LPIA DAI+YAGTGNLLC+AEDRV IFDLQQRL+LG+LQ P VKYVVWS+DMES+ALLSKHA++IA+KKLVH+CTLHETIRVKSGAWD+NGVFIYTTLNHIKYCLPNGDSGII+TLDVPIYIT+  GN IFCLDRDGK +
Sbjct:  405 DYLQEAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIAMDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPAVKYVVWSSDMESIALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRAIGNNIFCLDRDGKNK 590          

HSP 2 Score: 37.3502 bits (85), Expect = 7.155e-85
Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 2
Query:  551 GKNRAIVIDATEYIFKPVSIEEKNRTCHEPEKGTPHFGGRERLLILQQKGFP*NLLPLFGKKNKKNSDFNLGFKKGGKFQIGV 799
            GKN+ I +DA+EYIFK   + ++        K +    G+  +  LQQKGFP   + L   K++K + FNL   + G  QI V
Sbjct:  587 GKNKLITVDASEYIFKLALLRKRYDHVMSMIKNS-QLCGQAVISYLQQKGFP--EVALHFVKDEK-TRFNLAL-ESGNIQIAV 664          
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA1_ARATH (Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 2.705e-84
Identity = 166/232 (71.55%), Postives = 182/232 (78.45%), Query Frame = 1
Query:    4 DSVQDAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKEQGYSY*CNRIYF*ACLY*GKK*NLS*A*KRNSTLWG*GKIAYPAAKG 699
            D VQDAK+G GGSA+FIARNRFAVL+KS++Q             S LPI  DAIFYAGTGNLLCR+ED+VVIFDLQQRLVLG+LQTPFV+YVVWS+DMESVALLSKH IIIASKKLV QCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGK +  +       F   L   K+ +   +  +NS L G   IAY   KG
Sbjct:  405 DVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSSDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNKAITINATEYIFKLSLL-RKRYDHVMSMIKNSQLCGQAMIAYLQQKG 635          
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA_MOUSE (Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.080e-48
Identity = 93/178 (52.25%), Postives = 123/178 (69.10%), Query Frame = 1
Query:   16 DAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRD 549
            + K+  G +A+++ARNRFAVLD+  +               +     D IFYAGTGNLL R  D + +FD+QQ+  L  ++   VKYV+WS DM  VALL+KHAI+I ++KL   C +HE IRVKSGAWD++GVFIYTT NHIKY +  GD GIIRTLD+PIY+T+V GN ++CLDR+
Sbjct:  409 EGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKIQVPN--CDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRE 584          
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA_HUMAN (Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 4.080e-48
Identity = 93/178 (52.25%), Postives = 123/178 (69.10%), Query Frame = 1
Query:   16 DAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRD 549
            + K+  G +A+++ARNRFAVLD+  +               +     D IFYAGTGNLL R  D + +FD+QQ+  L  ++   VKYV+WS DM  VALL+KHAI+I ++KL   C +HE IRVKSGAWD++GVFIYTT NHIKY +  GD GIIRTLD+PIY+T+V GN ++CLDR+
Sbjct:  409 EGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPN--CDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRE 584          
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA_BOVIN (Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.187e-47
Identity = 92/178 (51.69%), Postives = 123/178 (69.10%), Query Frame = 1
Query:   16 DAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRD 549
            + K+  G +A+++ARNRFAVLD+  +               +     D IFYAGTGNLL R  + + +FD+QQ+  L  ++   VKYV+WS DM  VALL+KHAI+I ++KL   C +HE IRVKSGAWD++GVFIYTT NHIKY +  GD GIIRTLD+PIY+T+V GN ++CLDR+
Sbjct:  409 EGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPN--CDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRE 584          
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA_DICDI (Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.676e-43
Identity = 85/183 (46.45%), Postives = 121/183 (66.12%), Query Frame = 1
Query:   16 DAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGT-GNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKEQ 561
            + KKG G +AIF+ R+RFAVLDK +N               I P   D I+ +G+ G +L ++ED++ +FD+QQ+ +L ++Q   V+YV+WS D   VA L++  I++A+KKL   C +HET+  KSG WDDNGVFIY+T NH+KY L NGD+G IRTL+  IYIT V  N +F +DR+ K +
Sbjct:  400 NTKKGTGVAAIFVGRDRFAVLDKGNNVVIRDLENEEIKRCQI-PFTIDWIYPSGSPGTILIQSEDKIHMFDIQQKKMLCEIQVHGVRYVIWSKDRNYVAFLTRDFIVLANKKLEQICMIHETVLPKSGVWDDNGVFIYSTSNHLKYLLQNGDNGTIRTLESTIYITGVKNNKVFAIDREFKNR 581          

HSP 2 Score: 29.261 bits (64), Expect = 1.676e-43
Identity = 18/51 (35.29%), Postives = 27/51 (52.94%), Query Frame = 2
Query:  554 KNRAIVIDATEYIFKPVSIEEKNRTCHEPEKGTPHFGGRERLLILQQKGFP 706
            KNR I ID TEY+ K +S+ ++N              G+  +  LQ+KG+P
Sbjct:  579 KNRIIEIDTTEYVLK-LSLLQQNYNQVMTILRENRLVGKAIIAYLQKKGYP 628          
BLAST of EY710510 vs. ExPASy Swiss-Prot
Match: COPA_SCHPO (Putative coatomer subunit alpha OS=Schizosaccharomyces pombe GN=SPBPJ4664.04 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 6.111e-36
Identity = 76/179 (42.46%), Postives = 105/179 (58.66%), Query Frame = 1
Query:   10 VQDAKKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDR 546
            ++D  KG G  AIF+ARNRFAV  +S                  LP     IF+AG G++L     +V +FDLQQ+ ++       VKYVVWSND    ALL KH + I  K L    ++HETIR+KS  W +N V +Y TL+H+KY L +GD+G+I+TL+  +Y+ K  GN +F L+R
Sbjct:  412 LKDNIKGPGDDAIFVARNRFAVFSRSDQTIEIKDLSNKVTKTIQLPEKTRDIFFAGMGHVLLSTATQVHLFDLQQKKIVSSFNANRVKYVVWSNDNSQAALLGKHYVYIVKKNLELITSIHETIRIKSAVWVENNVLLYATLDHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNR 590          
The following BLAST results are available for this feature:
BLAST of EY710510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
COPA1_ORYSJ6.544e-8678.49Coatomer subunit alpha-1 OS=Oryza sativa subsp. ja... [more]
COPA2_ARATH1.873e-8572.41Coatomer subunit alpha-2 OS=Arabidopsis thaliana G... [more]
COPA2_ORYSJ2.471e-8577.96Coatomer subunit alpha-2 OS=Oryza sativa subsp. ja... [more]
COPA3_ORYSJ7.155e-8576.88Coatomer subunit alpha-3 OS=Oryza sativa subsp. ja... [more]
COPA1_ARATH2.705e-8471.55Coatomer subunit alpha-1 OS=Arabidopsis thaliana G... [more]
COPA_MOUSE4.080e-4852.25Coatomer subunit alpha OS=Mus musculus GN=Copa PE=... [more]
COPA_HUMAN4.080e-4852.25Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=... [more]
COPA_BOVIN1.187e-4751.69Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 ... [more]
COPA_DICDI1.676e-4346.45Coatomer subunit alpha OS=Dictyostelium discoideum... [more]
COPA_SCHPO6.111e-3642.46Putative coatomer subunit alpha OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710510 ID=EY710510; Name=EY710510; organism=Citrus sinensis; type=EST; length=1010bp
GGTGATAGTGTGCAAGATGCAAAGAAAGGTCTTGGAGGTTCGGCAATTTT
TATTGCCCGAAATAGATTTGCTGTACTTGACAAAAGCAGCAACCAAGTAT
TGGTCAAGAATCTAAAGAATGAGGTTGTTAAAAAGAGCATCCTTCCAATC
GCTGCAGATGCAATTTTCTATGCTGGAACTGGTAACTTGCTGTGTCGGGC
TGAGGATAGAGTGGTTATATTTGATCTACAGCAGAGGCTTGTTCTTGGTG
ATCTCCAAACTCCTTTTGTCAAGTATGTTGTATGGTCTAATGACATGGAG
AGTGTTGCCTTGCTCAGCAAACATGCCATTATCATTGCTAGTAAAAAGCT
TGTGCACCAGTGTACTCTTCATGAGACAATCCGAGTAAAGAGTGGAGCCT
GGGATGACAATGGTGTTTTCATTTACACAACTTTAAATCATATCAAATAC
TGCCTCCCAAATGGGGACAGTGGGATTATTAGAACCCTTGATGTCCCAAT
CTACATAACAAAGGTTTCTGGAAACACCATCTTTTGCTTGGATCGGGATG
GGAAAGAACAGGGCTATAGTTATTGATGCAACAGAATATATTTTTAAGCC
TGTCTCTATTGAGGAAAAAAATAGAACCTGTCATGAGCCTGAAAAAGGAA
CTCCACACTTTGGGGGTAGGGAAAGATTGCTTATCCTGCAGCAAAAGGGC
TTTCCCTGAAATTTGCTCCCCCTTTTTGGGAAAAAAAATAAAAAAAACTC
CGATTTTAATTTGGGTTTTAAAAAAGGGGGAAAATTTCAAATTGGGGTTT
GTCTCCCCCAAAGGGGAAAATTGTAGAAAAAAAAAACCGGGGGAAAAAAA
TATAGGGGGGGGGGAGGCTCTTTCCCCCCGGGGGGGAAGGGGGGGGGGCT
TTGGGGGGGAAAAAATAGTTTTTATACAAAAGAAAACACAAAAAAAATTT
TTTTTGGAAGAGGGGGTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTCTTT
CCATATAAAA
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