EY710499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.706e-72 Identity = 98/125 (78.40%), Postives = 109/125 (87.20%), Query Frame = 1 Query: 25 ISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 ISS+ +AT NR + QAS+ APFTGLKS+ AFP TKK NND +S+ SNGGRVQCMKVWPP GLKK+ETLSYLPPLSDEAL KEI+YLIR+ WIPCLEFELE G+VYREHH SPGYYDGRYWTMWK Sbjct: 4 ISSSAIATVNRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWK 128 HSP 2 Score: 78.5666 bits (192), Expect = 1.706e-72 Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPGV 557 P G ++ QV+KEVGE +KEYP++F+R+IGFDN RQVQCISFI A+PPGV Sbjct: 130 PMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPGV 180 HSP 3 Score: 22.3274 bits (46), Expect = 1.706e-72 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 128 KLPMFGCTD 136
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.352e-71 Identity = 105/130 (80.77%), Postives = 116/130 (89.23%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MA SMISSATVA +RAS AQ+SMVAPFT LKS+SAFP T+KTNNDITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E L KE++YL+R IPCLEFELE G+VYREH++SPGYYDGRYWTMWK Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWK 130 HSP 2 Score: 71.633 bits (174), Expect = 1.352e-71 Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPGV 557 P G +++QVLKE+ E +K YP +F+RIIGFDNKRQVQ ISFIA +PPGV Sbjct: 132 PMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPGV 182
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 1.412e-71 Identity = 104/130 (80.00%), Postives = 119/130 (91.54%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASSMISSATVAT +RA+ AQA+MVAPFTGLKS++AFPAT+K+NNDITS+ASNGGRVQCMKVWPP GL+KFETLSYLPPLS E+L K+I YLI GWIPCLEFELE +VYRE+++SPGYYDGRYW MWK Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWK 130 HSP 2 Score: 69.707 bits (169), Expect = 1.412e-71 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPP 551 P G +ATQVL E+ E K YP S +RIIGFDNKRQVQCISFIA +PP Sbjct: 132 PMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180 HSP 3 Score: 22.3274 bits (46), Expect = 1.412e-71 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 130 KLPMFGCTD 138
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 5.103e-71 Identity = 101/127 (79.53%), Postives = 114/127 (89.76%), Query Frame = 1 Query: 19 SMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 ++ISSA V T NRAS AQA++VAPFTGLKSS+ FP TKKTNNDITSIASNGGRV CM+VWPP G KKFETLSYLPPL++E L KE+ YLIR GWIPCLEFELEKG+VYRE+H+SPGYYDGRYWTMW+ Sbjct: 2 ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWR 128 HSP 2 Score: 67.3958 bits (163), Expect = 5.103e-71 Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQP 548 P GA +++QVLKE+ + + EYP SF+RIIGFDN RQVQCISFIA P Sbjct: 130 PLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 7.428e-70 Identity = 104/132 (78.79%), Postives = 117/132 (88.64%), Query Frame = 1 Query: 10 MASSMISSATVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASSMISS TVAT A+R + AQA MVAPF GLKSSSAFP T+K+N DITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEFELE G+VYRE+H+SPGYYDGRYWTMWK Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWK 131 HSP 2 Score: 69.707 bits (169), Expect = 7.428e-70 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPG 554 P G +++QVLKE+ E +K YP SF+RIIGFDN RQVQCISFIA +P G Sbjct: 133 PMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182 HSP 3 Score: 22.3274 bits (46), Expect = 7.428e-70 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 131 KLPMFGCTD 139
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 2.137e-69 Identity = 104/132 (78.79%), Postives = 117/132 (88.64%), Query Frame = 1 Query: 10 MASSMISSATVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASSMISS TVAT A+R + AQA MVAPFTGLKSSSA P T+K+N DITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEFELE G+VYRE+H+SPGYYDGRYWTMWK Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWK 131 HSP 2 Score: 69.707 bits (169), Expect = 2.137e-69 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPG 554 P G +++QVLKE+ E +K YP SF+RIIGFDN RQVQCISFIA +P G Sbjct: 133 PMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182 HSP 3 Score: 22.3274 bits (46), Expect = 2.137e-69 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 131 KLPMFGCTD 139
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.768e-68 Identity = 99/130 (76.15%), Postives = 112/130 (86.15%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASSM+S+ATVA+ NR S AQA+MVAPFTGLKS+ FP T+KTN+DITSI SNGG+VQCMKVWP G+KKFETLSYLPPL+ E L E+ YL+RSGWIPCLEFELE G VYREH + PGYYDGRYWTMWK Sbjct: 1 MASSMLSTATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWK 130 HSP 2 Score: 66.2402 bits (160), Expect = 1.768e-68 Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPG 554 P G +A QVLKE+ E+ K +P + RIIGFDN RQVQCISF+A +PPG Sbjct: 132 PMFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181 HSP 3 Score: 22.3274 bits (46), Expect = 1.768e-68 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 130 KLPMFGCTD 138
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.904e-68 Identity = 101/130 (77.69%), Postives = 113/130 (86.92%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASSM+S+A VA NRAS AQASMVAPFTGLKS+SAFP T+KT DITSIASNGGRVQCM+VWPP G K +ETLSYLPPL+ E L KE+ YL+R GW+PCLEFELE G VYRE+H+SPGYYDGRYWTMWK Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWK 130 HSP 2 Score: 62.003 bits (149), Expect = 3.904e-68 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPGVK 560 P G +A QVL+E+ E+ K YP + RIIGFDN RQVQCISF+A +P G + Sbjct: 132 PMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKGAE 183 HSP 3 Score: 22.3274 bits (46), Expect = 3.904e-68 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 130 KLPMFGCTD 138
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.904e-68 Identity = 98/131 (74.81%), Postives = 118/131 (90.08%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASS++SSA VAT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE+HKSPGYYDGRYWTMWK Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWK 129 HSP 2 Score: 68.1662 bits (165), Expect = 3.904e-68 Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPPG 554 P G +ATQVL EV E +K YP +++RIIGFDN RQVQCISFIA +P G Sbjct: 131 PMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180 HSP 3 Score: 22.3274 bits (46), Expect = 3.904e-68 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLPM+GCT+ Sbjct: 129 KLPMFGCTD 137
BLAST of EY710499 vs. ExPASy Swiss-Prot
Match: RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2) HSP 1 Score: 206.453 bits (524), Expect = 2.479e-67 Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 1 Query: 10 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWK 399 MASSM+SSA V T S AQA+MVAPFTGLKSS+AFP T+KTN DITSIASNGGRV CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWK Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWK 126 HSP 2 Score: 71.633 bits (174), Expect = 2.479e-67 Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 3 Query: 405 PCMGAQNATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAQPP 551 P G ++ QVLKEV E +KEYP +F+RIIGFDN RQVQCISFIA +PP Sbjct: 128 PLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176 HSP 3 Score: 21.1718 bits (43), Expect = 2.479e-67 Identity = 6/9 (66.67%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 398 KLPMYGCTE 424 KLP++GCT+ Sbjct: 126 KLPLFGCTD 134 The following BLAST results are available for this feature:
BLAST of EY710499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710499 ID=EY710499; Name=EY710499; organism=Citrus sinensis; type=EST; length=969bpback to top |