EY710498

Overview
NameEY710498
Unique NameEY710498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1021
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710498 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.839e-42
Identity = 77/122 (63.11%), Postives = 96/122 (78.69%), Query Frame = 2
Query:  245 SLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKKFTYILQVKDQIGSFYYFPSPAFH 610
            +L   L   V AEDPY +FNWNVTYG I PLGV Q+GILIN QFPGP I+  +N+N+++NVFN+LDEPFL +WNG+Q+R+NS++DG  GT CPI PG+ FTY  QVKDQIGS+ YFP+ A H
Sbjct:   10 ALLLCLSVGVIAEDPYLYFNWNVTYGTIAPLGVPQQGILINGQFPGPRINCTSNNNIVVNVFNNLDEPFLFTWNGVQHRKNSWQDGTPGTMCPIMPGQNFTYRFQVKDQIGSYSYFPTTALH 131          

HSP 2 Score: 23.483 bits (49), Expect = 1.839e-42
Identity = 16/48 (33.33%), Postives = 21/48 (43.75%), Query Frame = 1
Query:  589 FPFPCIPQTTGGFWRKKGSLPNRH----FPFPSQIWPANYTVFTGNWY 720
            FP   + +  GG+    G+L N H     P P       Y VF G+WY
Sbjct:  125 FPTTALHRAAGGY----GAL-NVHSRALIPVPFDNPADEYNVFVGDWY 167          
BLAST of EY710498 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 6.590e-38
Identity = 76/132 (57.58%), Postives = 96/132 (72.73%), Query Frame = 2
Query:  215 LNLAVAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKKFTYILQVKDQIGSFYYFPSPAFH 610
            L LA AA++         +V AEDPY    WNVTYG   PLGV Q+ ILIN QFPGP+I+S +N+N+IINVFN+LDEPFLL+WNGIQ+R+N ++DG  GT CPI PG  +TY  Q KDQIGS++Y+P+   H
Sbjct:   11 LYLAAAATV---------VVHAEDPYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLTWNGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMH 133          
BLAST of EY710498 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 8.337e-33
Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 2
Query:  209 MPLNLAVAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKKFTYILQVKDQIGSFYYFPSPAF 607
            M    ++ AS    F  L A+  A DP+  +++ V+Y    PLGV Q+ I +N QFPGP +++ TN N+++NVFN LDEP LL+W GIQ RRNS++DGV GT CPIPP   FTY  QVKDQIGSF+Y PS  F
Sbjct:    1 MAATCSLLASFLLCFALLSAVSFAADPFVSYDFRVSYLTASPLGVPQQVIAVNGQFPGPLLNATTNYNVVVNVFNHLDEPLLLTWPGIQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGSFFYSPSLNF 133          
BLAST of EY710498 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.168e-32
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 2
Query:  278 AEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKKFTYILQVKDQIGSFYYFPSPAF 607
            A DPY F+N+ V+Y    PLGV Q+ I IN +FPGP I+  TN+NL++NV N LDE  LL WNGIQ RR S++DGV GT CPIPP   +TY  QVKDQIGSF+YFPS  F
Sbjct:   20 AADPYSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNENLVVNVRNKLDEGLLLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGSFFYFPSLHF 129          
BLAST of EY710498 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.627e-30
Identity = 62/119 (52.10%), Postives = 82/119 (68.91%), Query Frame = 2
Query:  251 FCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKKFTYILQVKDQIGSFYYFPSPAF 607
            F  +F    A DPY  +++ ++Y    PLGV Q+ I +N +FPGP I++ TN N+ +NV N LDEP LL+W G+Q RRNS++DGV GT CPIPP   FTY  Q+KDQIGS++Y PS  F
Sbjct:   14 FALIFGFSFAGDPYVSYDFTLSYITASPLGVPQQVIAVNGKFPGPVINATTNYNVHVNVLNHLDEPLLLTWPGVQMRRNSWQDGVLGTNCPIPPNWNFTYDFQLKDQIGSYFYSPSLNF 132          
BLAST of EY710498 vs. ExPASy Swiss-Prot
Match: LAC2_THACU (Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.293e-13
Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 2
Query:  227 VAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFL-----LSWNGIQNRRNSFEDG-VYGTTCPIPPGKKFTYILQVKDQIGSFYY 589
            +A S  SLF +L  + SA      + ++V  G + P GV +  +L+N +FPGP I +   D L I V N L +P +     + W+G+   R + EDG  + T CPIPP + +TY + + +Q G+++Y
Sbjct:    1 MARSTTSLF-ALSLVASAFARVVDYGFDVANGAVAPDGVTRNAVLVNGRFPGPLITANKGDTLKITVRNKLSDPTMRRSTTIHWHGLLQHRTAEEDGPAFVTQCPIPPQESYTYTMPLGEQTGTYWY 126          
BLAST of EY710498 vs. ExPASy Swiss-Prot
Match: LAC1_THACU (Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.969e-11
Identity = 34/103 (33.01%), Postives = 58/103 (56.31%), Query Frame = 2
Query:  299 FNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFL-----LSWNGIQNRRNSFEDG-VYGTTCPIPPGKKFTYILQVKDQIGSFYY 589
            +   ++ G+I P GV++   L+N  +PGP I +   D L + V N L  P +     + W+G+   RN+ +DG  + T CPI P + +TY + + DQ G+++Y
Sbjct:   24 YGLKISDGEIAPDGVKRNATLVNGGYPGPLIFANKGDTLKVKVQNKLTNPEMYRTTSIHWHGLLQHRNADDDGPSFVTQCPIVPRESYTYTIPLDDQTGTYWY 126          
The following BLAST results are available for this feature:
BLAST of EY710498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ASOL_TOBAC1.839e-4263.11L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
ASOL_BRANA6.590e-3857.58L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
SKS1_ARATH8.337e-3352.63Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKU5_ARATH3.168e-3260.91Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS2_ARATH8.627e-3052.10Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
LAC2_THACU3.293e-1334.65Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 ... [more]
LAC1_THACU8.969e-1133.01Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-115-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710498 ID=EY710498; Name=EY710498; organism=Citrus sinensis; type=EST; length=1021bp
CGGGTACGGGGTCCGGGAATTCCGGGTCGACCCCGCGTCCGCTTAACTTC
TTTCTTTCCTCTCCTATTTTTCAATTTTTCTTTTGGAAAAAAAAAAAACT
CTCTCTCCCTCTCTCTCTCTCTCTCTCTCCCCGCCCCATTCATCGCACTA
ATCTGAAAGGTCACAAAAGCAAACAAGACTTGACTTAGCCTTCTGCCTTC
CCCCCAAAATGCCGCTAAACTTAGCTGTCGCTGCTTCAATTTGCTCCTTG
TTTTGTTCCCTTTTTGCCATTGTCAGTGCTGAGGATCCTTACAGATTCTT
CAACTGGAATGTCACTTACGGCGACATCTATCCGCTCGGCGTTCGCCAAC
GGGGCATTTTGATAAACTGGCAATTCCCAGGCCCCGATATTCACTCAGTT
ACAAATGACAATCTTATTATCAATGTGTTCAACAGCTTAGACGAGCCTTT
TCTTCTTTCCTGGAATGGAATTCAAAACAGGAGGAATTCATTTGAAGATG
GTGTCTATGGAACGACTTGCCCTATTCCTCCTGGGAAAAAATTTACATAC
ATTCTTCAAGTGAAGGATCAAATTGGAAGCTTTTACTATTTCCCTTCCCC
TGCATTCCACAAACCACCGGGGGGTTTTGGAGGAAAAAAGGATCCTTACC
CAACCGGCATTTCCCTTTCCCTTCCCAAATCTGGCCGGCGAATTACACGG
TCTTTACCGGAAATTGGTACAAACCCAAACCACCCGGATTGAGGGGCCAA
TTTGGGAAAAGGGAAAAAACATACCTTCCCCCCAAAGGGAAATTTTAAAC
AAGGGGCGCGGGGGGAAGGGGGGGGGCTTTTAAAGGGTTAAAAAAGGGAA
AAACATTAAGCGGGCCCAAAAAAATAAAAAGGGTGGAGATTGGAAAAAAA
CCCAATCCCATTTTCCCCCCTATTAAAAACCCAAAAAAAAAAAAAAGAAA
TTTGGGGAAAAAAGTGTAGGGGAGGAAAAAAATAAACCCCCCCCCTACAA
AAACAATCCAATCACTACCTA
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