EY685145

Overview
NameEY685145
Unique NameEY685145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1076
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685145_ssr339 microsatellite EY685145_ssr339:339..350. BLAST: Citrus ESTs to SwissProt
EY685145_ssr476 microsatellite EY685145_ssr476:476..487. BLAST: Citrus ESTs to SwissProt
Homology
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BLAST of EY685145 vs. ExPASy Swiss-Prot
Match: DHGA_ACICA (Quinoprotein glucose dehydrogenase A OS=Acinetobacter calcoaceticus GN=gdhA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.370e-14
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = -1 
Query:   30 ASGKEIWRFAPKISTEGGANFKGWAHMTCRGVSYHDDAVYASEQXXXXXXXXXXXXXACPKRIFVPRGDTRLIALNADT*RVCEDFGDKGQVD 308
            A+GKE WRF PK+ T+     K + H+TCRGV Y+D     + +              CP+++FVP  D RL+A+NADT + C DFG  GQV+
Sbjct:  240 ATGKEKWRFDPKLKTD-----KSFQHLTCRGVMYYD--ANNTTEFATSLQSKKSSSTQCPRKVFVPVNDGRLVAVNADTGKACTDFGQNGQVN 325
The following BLAST results are available for this feature:
BLAST of EY685145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHGA_ACICA9.370e-1441.94Quinoprotein glucose dehydrogenase A OS=Acinetobac... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-C12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685145 ID=EY685145; Name=EY685145; organism=Citrus sinensis; type=EST; length=1076bp
ACCTGCCGGGTACGGTCCGGGATTCCCGGGTCGACCTGGCCCTTGTCACC
GAAGTCTTCGCACACCCTCTAGGTGTCGGCGTTCAGGGCGATCAGACGGG
TGTCGCCCCTAGGTACGAAGATGCGTTTCGGGCAGGCATTCGGCGCGGCG
GCCGGGCTGGCGCTGCCAGTCGGGCTCTGCTCGGAGGCATACACGGCGTC
ATCGTGATACGACACGCCACGGCAGGTCATGTGCGCCCAACCTTTGAAGT
TTGCACCGCCTTCGGTGCTGATCTTCGGAGCGAAACGCCAGATTTCCTTG
CCGGAGGCTAGGCCAACACGCATCCACCCGCCTCGGTGCGCCGCCGCCGC
CCGCCCCGGCACACAACCGCCCCCCCCCCCCTCCCGCCTGGGCCATGGCC
CCCCGAGGGGGTGCGGGGCGGGGTACGGGAAGAATCGCCCAGGGGAGGGG
GGGGGGGGGGCCACAAACAGCCCCTCACCCACCCACCGCGAGGGCCCGAA
ACGCCCACCCACGCCCGCCCCGCCCCCCGCCCCCACCCCCCAGCGGGGAC
CAGCACTGGACCCGCCGCAGCGCCCCACCGGGGAGGGCGACGCGCAAAGG
CGGAGGCCGCGCCCTGCAGGCGCCAGCCCGCCGGCCGCACGACCCCGAAC
GAGCAAACAAAACCCACGAAGGCGCACCCGAAAACGACCGCCCGGCACCC
GGGCGGCACCACGCACAGGCACCGCGCCGAACGGAGCGGCCGCATCAGCG
AACCCAAAGCACGAGGGCGACCACAACTCGGCGCACCGAACAGAGACCAG
ACACGCGCGGTCAGGCCCCCTCGCCGCAACAGCACCCGCCACCGGAAATC
CCGCAAAACCCCACCACACCCACAAAACCCAAGACCCAAAAACGCCAGAG
CCACCGACAGAAACGAGTACCCAAGAACCAACAGGAGACCGCGAGGGGGA
GAGGCAGAAAACAAAACACCAACCACAGTGACGAATCAAAGGACGCCCCA
GGGGCAAGGCGGGCGGCACAACCGGAAGTGAAGCAGCAAGACTCTGCAGC
AGAACGAGAGACGGAAGAACCAAGGA
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