EY685139

Overview
NameEY685139
Unique NameEY685139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685139 vs. ExPASy Swiss-Prot
Match: Y2446_ARATH (Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.201e-11
Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = 1 
Query:   43 VNHFIMVSSLGTNKFGF-----PAAI-LNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 423
            V  F++VSS+  N         PA + LNLF   L+ K +AE+ +  SG+ YTIVRPGG++        T N+ +  EDTL+ G +S   VAE +A  A  +  S  KVVE++A   AP    ++L A +  Q
Sbjct:  153 VEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKND----PPTGNVVMEPEDTLYEGSISRDLVAE-VAVEALLQEESSFKVVEIVARAEAPKRSYKDLFASVKGQ 280
The following BLAST results are available for this feature:
BLAST of EY685139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2446_ARATH3.201e-1137.59Uncharacterized protein At2g34460, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-C06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685139 ID=EY685139; Name=EY685139; organism=Citrus sinensis; type=EST; length=874bp
CCCACGCGTCCGCCCACGCGTCCGGCAGCAACTATTGCAAAAGTGAACCA
CTTTATCATGGTTTCATCATTGGGAACAAATAAATTTGGATTTCCTGCAG
CTATTCTAAATTTGTTTTGGGGAGTCCTGATCTGGAAAAGAAAGGCAGAA
GAAGCACTTATAGCCAGTGGTCTCCCTTACACTATAGTCCGACCTGGAGG
AATGGAGCGGCCTACTGATGCTTACAAGGAAACACATAATATTACCCTTT
CACAAGAAGATACTTTATTTGGTGGCCAGGTGTCTAATCTTCAGGTCGCA
GAACTCTTGGCATGTATGGCCAAAAACCGTAGCCTTTCATACTGCAAGGT
AGTGGAGGTAATTGCTGAGACAACTGCACCATTGACTCCTATGGAGGAAC
TTCTTGCAAAGATACCATCTCAACGTGCTGAACCAAAGGAATCAATTGCC
CCTGAGAAGTCTGATCCACCAGCTTCTAAGAGCATGATCTCCGAGGAATC
TAGTGCTCCCATTACCGACGAACCTGTCCAAACAAAAGCTTTTCATCAAT
TACAATGAAAGAGAAACACAGAGCCGACTGAAGGGAACCCAGATCCCGAG
ACACAGACAGAACACATAAACAACAACCAAAGGGGGGGCCCTCCAAAAAG
GACCAACCTTCCCTGCGCCGGCATGCCAAGTCGTAAGTCTACCACAAGCG
GGCCCCAATTCCTCCTCCCAGCCCACCCGACTCCACCCGCCGGGCGGGGA
AAACCCCGCCATGTCTCAGAATAAATCGCCCTTGACGCGCACCCACTCTT
CCCCCAGTGCGCGCGAAGGGCAAAGGGCCCCATACAACACCCACTCACCC
CACCGCGGAGACCCCCTAAGCGAG
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