EY685136

Overview
NameEY685136
Unique NameEY685136
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685136_ssr888 microsatellite EY685136_ssr888:888..897. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY685136 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.648e-16
Identity = 55/150 (36.67%), Postives = 78/150 (52.00%), Query Frame = 1
Query:  208 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSET--GFKTVTTKSTSNTFQNYTILKVQKIPCFQDGNLSLH-VLFLMAIYG 648
            +FF  +DL  G+KM L+      +  A  LPR  ADS PF+ ++LP IL   S+P  SP A AM  TL  CE  P   E K CATSLESM++FA S  G+       T   ++     Q Y +  V+ +P      ++ H + +  A++G
Sbjct:   27 VFFLEKDLFPGSKMTLHFTRA--TAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFG 174          
BLAST of EY685136 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.810e-15
Identity = 54/130 (41.54%), Postives = 70/130 (53.85%), Query Frame = 1
Query:  202 VKIFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSE--TGFKTVTTKSTSNTFQNYTILKVQK 585
            V +FF  +DL  G  MA++           FLPR EAD+ PFS +++P IL   S+   S +A  M  TLR CE  P + E K CATSLESM+DFA S  G+       TV  K  S   Q YT+  V++
Sbjct:  210 VALFFLEKDLHPGKTMAVHFTATTAGEK--FLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPE-QEYTVTAVKR 336          
BLAST of EY685136 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.934e-14
Identity = 51/137 (37.23%), Postives = 80/137 (58.39%), Query Frame = 1
Query:  199 EVKIFFTLRDLKVGNKM--ALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGS---ETGFKTVTTKS--TSNTFQNYTILKVQKI 588
            ++ +FF  ++L+ G K+  AL+      + ++ FLPR +ADS PFS K+LP IL+   +   S  A  M  TL+ CE    K E K CATSLES++DF  S FG+   +     V +K+  +S+  Q+YT+  V+++
Sbjct:  359 DMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTVSGVRRM 495          
BLAST of EY685136 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.196e-12
Identity = 53/157 (33.76%), Postives = 77/157 (49.04%), Query Frame = 1
Query:  208 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKT-----CATSLESMLDFAGSIFGSETGFKT---VTTKSTSNTFQNYTILKVQKIPCFQDGNLSLHVL-FLMAIYGL 651
            +FF  +DL  G+KM L+      +  A  LPR  ADS PF+ ++LP IL   SIP  SP A AM  TL +CE   I  E        CATSLESM++   S  G+         V  ++     Q Y +  V+ +P      ++ H + +  A++G+
Sbjct:   66 VFFLEKDLFPGSKMTLHFTRA--TAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVELVASSLGTRDVHAVSTEVVNRAGPTPRQAYRVEAVRPVPVPGGDMVACHRMPYAYAVFGV 220          
BLAST of EY685136 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.119e-12
Identity = 54/156 (34.62%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  208 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKT----CATSLESMLDFAGSIFGSETGFKT---VTTKSTSNTFQNYTILKVQKIPCFQDGNLSLHVL-FLMAIYGL 651
            +FF  +DL  G+KM L+      +  A  LPR  A+S PF+ ++LP IL   SIP VSP A AM  TL  CE   +  E       CATSLESM++F  S  G+         V +  T    Q Y +  V+ +       ++ H + +  A++GL
Sbjct:   64 VFFLEKDLFPGSKMTLHFTRA--TAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLGTRDVHAVSTEVISTLTPTPRQAYRVEAVRPVAVPGGDMVACHGMPYAYAVFGL 217          
BLAST of EY685136 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.298e-12
Identity = 45/128 (35.16%), Postives = 67/128 (52.34%), Query Frame = 1
Query:  208 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGS-ETGFKTVTTKSTSNTFQNYTILKVQKI 588
            +FF    ++VG ++  + P    + +  FLPR+ ADS PF+   LP IL    I   S    +ME TLR CE+  I  E K CATSLE++++ A  + G+ +    T T        Q YT++ VQ +
Sbjct:  141 VFFHEEAVRVGRRLPFHFPPATPA-ALGFLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVAVQPV 267          
BLAST of EY685136 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 49/152 (32.24%), Postives = 75/152 (49.34%), Query Frame = 1
Query:  184 DVNSSEVK---IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPI--KDEIKTCATSLESMLDFAGSIFGSE----TGFKTVTTKSTSNTFQNYTILKVQKIPCFQDGNL 612
            D +  EV    +FF  +DL  G+K+ L+         A  L R  AD+ PF+ ++LP IL   S+P  S  A+ M  TL  CE   +  +D+ K C TSLESM++FA +  G+        + + T +     Q YT+  V+ +     GN+
Sbjct:   86 DTDMDEVSTDAVFFLEKDLFPGSKITLHFT--RGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTRDIRAVSTEVIGTGAAETPRQEYTVEAVKPVVSVSGGNM 235          
BLAST of EY685136 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:  208 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGS 507
            +FF    ++VG ++  Y P    S +  FLPR  ADS PF+   LP +L L  +   + +A  M +TLR CE   +  E K CATSLE++++ A +  G+
Sbjct:  189 VFFHEEAVRVGERLPFYFPAATTS-ALGFLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGT 287          
The following BLAST results are available for this feature:
BLAST of EY685136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
BURP6_ORYSJ3.648e-1636.67BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP3_ORYSJ1.810e-1541.54BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURPH_ORYSJ9.934e-1437.23BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP2_ORYSJ3.196e-1233.76BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP1_ORYSJ7.119e-1234.62BURP domain-containing protein 1 OS=Oryza sativa s... [more]
RAF1B_WHEAT9.298e-1235.16Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURP8_ORYSJ6.027e-1132.24BURP domain-containing protein 8 OS=Oryza sativa s... [more]
BURPD_ORYSJ7.871e-1137.00BURP domain-containing protein 13 OS=Oryza sativa ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-C03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685136 ID=EY685136; Name=EY685136; organism=Citrus sinensis; type=EST; length=935bp
CCACGCGTCCGCCCACGCGTCCGGAGCAAGATGGGTTTAGGATTAGCTTC
TTGGAACATCCTTCTACAGCTCCTCCTCCTGTGCGCATACAGAAGCGGTG
CCAGGGAATTGAGAGAGGAGTCTCTGCCTCAAATGGATGTTCAACTTCAT
CATATGCATATAGCTCATCATTCATCCCATGTGGACGTAAACTCAAGCGA
GGTCAAGATATTCTTCACCTTGAGGGATCTAAAGGTAGGTAATAAAATGG
CCCTCTATCTTCCAATTGAAGATCATTCAAATTCTGCTCACTTTTTGCCT
AGAGAAGAAGCTGATTCCTTTCCATTTTCATTGAAACAACTTCCTTATAT
TCTTGAATTAACCTCCATCCCACGCGTCTCACCGCAAGCCAAAGCCATGG
AAGACACTCTCAGGATGTGTGAAACCGATCCCATCAAAGATGAAATCAAA
ACTTGTGCTACCTCTTTAGAATCCATGCTTGATTTTGCTGGCAGCATCTT
TGGCTCGGAGACAGGTTTTAAAACTGTGACCACAAAGTCTACCAGTAATA
CTTTCCAAAATTATACAATCCTAAAGGTGCAAAAGATCCCCTGCTTCCAA
GATGGTAACTTGTCATTACATGTCCTATTCCTTATGGCAATTTACGGGCT
GCCATAAGCCATATGACAGAGAACCTCAACAAGGTATTTAGGGGCTTCTC
CGGGCCGGGGACAAGGGGACATATTGCCGACAGCTATTTCCGCCTTGCCA
CCGCCAACCTCCTCCGGGGACCCTGCACCACCCTCACTCCCCAACCTGGC
GATACGACGGGGGACTTACCCCCGACCCCCGTGAACAACACAAACAATCT
TGTTGTCCTCCGTACCTCCAAACAAAAAAAATGCAATACACACACACCTA
TCGATTCACACCACAAAAAGCTCTCGGGCGGAGAG
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