EY685134

Overview
NameEY685134
Unique NameEY685134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685134_ssr731 microsatellite EY685134_ssr731:731..745. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.262e-74
Identity = 128/161 (79.50%), Postives = 146/161 (90.68%), Query Frame = 3
Query:   12 DSIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVPTALGN 494
            DS++W+ WHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AV  AL +
Sbjct:  129 DSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSD 289          
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.262e-74
Identity = 128/161 (79.50%), Postives = 146/161 (90.68%), Query Frame = 3
Query:   12 DSIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVPTALGN 494
            DS++W+ WHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AV  AL +
Sbjct:  129 DSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSD 289          
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 8.466e-71
Identity = 124/165 (75.15%), Postives = 140/165 (84.85%), Query Frame = 3
Query:   12 DSIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVPTALGNTSKL 506
            DSI+WA WH FWVDERVVPK+HDDSNYKLAYD FLS+VPI  GNVYAIN+ALSAE AA+DYETCLKHL  +NIL  S +TGFPKFDLMLLGMGPDGH+ASLFPGH L  E++KWV  I DSPKPP ERITFTFPVINSSA++A+VVCG+GK+ AV  AL  T  +
Sbjct:  137 DSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAALKKTGNV 301          
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.652e-66
Identity = 114/161 (70.81%), Postives = 135/161 (83.85%), Query Frame = 3
Query:   12 DSIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVPTALGN 494
            +++EW+ WHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  +
Sbjct:  132 EAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSD 292          
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.652e-66
Identity = 114/161 (70.81%), Postives = 135/161 (83.85%), Query Frame = 3
Query:   12 DSIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVPTALGN 494
            +++EW+ WHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  +
Sbjct:  132 EAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSD 292          
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.221e-54
Identity = 101/169 (59.76%), Postives = 121/169 (71.60%), Query Frame = 3
Query:   12 DSIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEG----AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVPTALGNTSKL 506
            DSIEW+ WH+FWVDERV   DH DSNYKLAYDGFLS+VP+   N+YAI++ L AEG    AAE YE CLK     NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  + E  KWVT I DSPKPP +RIT T PVIN ++Y  M VC   ++ +V  AL +T  L
Sbjct:   60 DSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVCDKEQADSVAAALNHTKDL 228          
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.739e-52
Identity = 96/159 (60.38%), Postives = 118/159 (74.21%), Query Frame = 3
Query:   12 DSIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAV 476
            +SIEW+ WH+FWVDERVVP DH+DSNYKLA+DGFLS+VPI   N+Y I+   +A G A+     YE CLK L   NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  +KE    VT+I DSPKPPP+RITFT PVIN ++Y  M VC   ++ AV
Sbjct:   66 ESIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTYITDSPKPPPKRITFTLPVINCASYNLMAVCDEAQADAV 224          
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 1.150e-51
Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = 3
Query:   12 DSIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAV 476
            DSIEW  WHVFWVDERV   +  DSNYKLA +GFLS+VPI   N+YAI+  L+A+G AE     YE CLK+L K  I+  S  TG+P+FDL LLGMGPDGH+ASLFP HP + E +KWVT+I DSPKPPP+RITFT PVINS+ Y  M +C    + +V
Sbjct:   60 DSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSV 218          
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.525e-47
Identity = 84/162 (51.85%), Postives = 116/162 (71.60%), Query Frame = 3
Query:   15 SIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVPTALGNTS 500
            +++W+ W++FW DER V K+H +SNY++  +GFLS+VPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ + +
Sbjct:   72 TLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNA 233          
BLAST of EY685134 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.525e-47
Identity = 84/162 (51.85%), Postives = 116/162 (71.60%), Query Frame = 3
Query:   15 SIEWATWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVPTALGNTS 500
            +++W+ W++FW DER V K+H +SNY++  +GFLS+VPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ + +
Sbjct:   72 TLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNA 233          
The following BLAST results are available for this feature:
BLAST of EY685134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
6PGL4_ORYSJ1.262e-7479.50Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI1.262e-7479.50Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH8.466e-7175.15Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ1.652e-6670.81Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI1.652e-6670.81Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL2_ARATH4.221e-5459.76Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL4_ARATH6.739e-5260.38Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL3_ARATH1.150e-5160.38Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL2_ORYSJ8.525e-4751.85Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL2_ORYSI8.525e-4751.85Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685134 ID=EY685134; Name=EY685134; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGGATTCAATTGAATGGGCGACATGGCATGTGTTTTGGGTT
GATGAAAGAGTTGTTCCCAAGGATCATGATGATAGCAATTATAAGCTTGC
TTATGATGGTTTCCTTTCTCAGGTACCAATTACCACTGGCAATGTCTATG
CCATCAATGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTACGAGACT
TGTCTCAAGCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTAC
TGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGAC
ATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAGAAA
TGGGTTACTTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAGAATCAC
TTTCACCTTCCCTGTAATCAACTCATCTGCATATATTGCAATGGTGGTGT
GTGGTGCTGGAAAATCAAGTGCAGTTCCAACTGCATTGGGTAATACATCA
AAACTCTGATTTGCTGCCATATCAAATGGCAATTACGCTGAAAAAGAATT
CGCTCTGGTTACTCTACGCAGAACCCAACGCCCACCTGGGACACACCCAC
GCAATAACCGCATGAATCGCTCACAGTTAACTGCACTAACACAAGCGACG
AAACCCGGCGGCCACAGCCCGCATAGAAGGCGGCCCCGCCAGCCACCACA
AGACGCGCACGCAGAGGGCCAACCACAACCCCCCACCCCACCCCACCACA
ACCCCCACCCCACCACACCAAACACACAACCCACACACCCACGCCACAAA
TCACCAGAACCATCCAGAACCACCACACGAGAATCCGAGAACGCCCAGCA
AGAGCACCGCCGCGCAGCAAACCACGCAGCCGCAGCAACCACCGCCCAAG
ACACA
back to top