EY685107 | Citrus Genome Database

Overview


Name	EY685107
Unique Name	EY685107
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	911

Libraries


Library Name	Type
Sweet orange bark, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 7.257e-75
Identity = 86/103 (83.50%), Postives = 94/103 (91.26%), Query Frame = 2

Query:   38 LIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNT 346
            LIPMEIALKIA+KIRA+ERFAAYIVIPMWPEGVPTGAATQRIL+WQHKT+QMMYETIYKALVE GLEGAFSPQDYLNFFCLGNRE++D  D S +G+P    T
Sbjct:  699 LIPMEIALKIAEKIRANERFAAYIVIPMWPEGVPTGAATQRILYWQHKTIQMMYETIYKALVETGLEGAFSPQDYLNFFCLGNREMVDGIDNSGTGSPRQMQT 801

HSP 2 Score: 112.079 bits (279), Expect = 7.257e-75
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLW 528
            HS GM+VDDEYV++GSANINQRSMEGTRDTEIAMGAYQP++TWAR    P GQIYGYRMSLW
Sbjct:  818 HSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLW 879

HSP 3 Score: 31.5722 bits (70), Expect = 7.257e-75
Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 3

Query:  567 QPETLECVKKVKSVSNNNW 623
            QPE++ECV+KV+++   NW
Sbjct:  892 QPESIECVRKVRTMGERNW 910

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.486e-73
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 2

Query:   38 LIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEG 355
            LIPMEIALKIADKIRA ERFAAYIVIPMWPEGVPTGAATQRIL+WQHKTMQMMY TIY ALVE GLE  +SPQDYLNFFCLGNRE+++  + S +G+ +  NTP+G
Sbjct:  648 LIPMEIALKIADKIRAKERFAAYIVIPMWPEGVPTGAATQRILYWQHKTMQMMYGTIYNALVEAGLEDEYSPQDYLNFFCLGNREMVNGNNESGTGSASNENTPQG 753

HSP 2 Score: 113.235 bits (282), Expect = 6.486e-73
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWGTTSWIH*GLLPD 567
            HS GM+VDDEYV++GSANINQRSMEGTRDTEIAMGAYQP++TWAR +  P GQIYGYRMSLW      H  LL D
Sbjct:  766 HSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAE----HMALLDD 836

HSP 3 Score: 30.0314 bits (66), Expect = 6.486e-73
Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 3

Query:  567 QPETLECVKKVKSVSNNNW 623
            +PE+L CV+KV++V+  NW
Sbjct:  840 EPESLGCVRKVRTVAEENW 858

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 7.239e-62
Identity = 75/104 (72.12%), Postives = 83/104 (79.81%), Query Frame = 2

Query:   38 LIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTP 349
            LIPMEIALKIA+KIRA E+FAAYIVIPMWPEG PT    QRIL+WQHKTMQMMY+TIYKALVEVGL+  F PQD+LNFFCLG REV   T  S+  +P  P  P
Sbjct:  585 LIPMEIALKIANKIRAREKFAAYIVIPMWPEGAPTSNPIQRILYWQHKTMQMMYQTIYKALVEVGLDSQFEPQDFLNFFCLGTREVPVGT-VSVYNSPRKPPQP 687

HSP 2 Score: 107.842 bits (268), Expect = 7.239e-62
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWGTTSWIH*GLLP---DNPRLWNV*KRLNQ*AIITGQEVAAED 645
            HS GM+VDDE+V++GSANINQRS+EGTRDTEIAMG YQP Y+WA     P+GQI+GYRMSLW      H G L    + P      +R+ Q + +  ++ AAE+
Sbjct:  709 HSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAE----HLGFLEQGFEEPENMECVRRVRQLSELNWRQYAAEE 808

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.340e-60
Identity = 70/86 (81.40%), Postives = 76/86 (88.37%), Query Frame = 2

Query:   38 LIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREV 295
            LIPMEIALKIA+KIRA E+FAAYIVIPMWPEG PT    QRIL+WQHKTMQMMY+TIYKALVEVGL+G   PQD+LNFFCLG REV
Sbjct:  592 LIPMEIALKIANKIRAREKFAAYIVIPMWPEGAPTSNPIQRILYWQHKTMQMMYQTIYKALVEVGLDGQLEPQDFLNFFCLGTREV 677

HSP 2 Score: 105.531 bits (262), Expect = 1.340e-60
Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWGTTSWIH*GLLP---DNPRLWNV*KRLNQ*AIITGQEVAAED 645
            HS GM+VDDE+V++GSANINQRS+EGTRDTEIAMG YQP ++WA+    P GQI+GYRMSLW      H G L    + P      +R+ Q + +  ++ AAE+
Sbjct:  717 HSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAE----HLGFLEQEFEEPENMECVRRVRQLSELNWRQYAAEE 816

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 1.747e-60
Identity = 70/86 (81.40%), Postives = 76/86 (88.37%), Query Frame = 2

Query:   38 LIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREV 295
            LIPMEIALKIA+KIRA E FAAYIVIPMWPEG PT    QRIL+WQHKTMQMMY+TIYKAL+EVGL+G   PQD+LNFFCLGNREV
Sbjct:  582 LIPMEIALKIANKIRARENFAAYIVIPMWPEGAPTSKPIQRILYWQHKTMQMMYQTIYKALLEVGLDGQLEPQDFLNFFCLGNREV 667

HSP 2 Score: 104.375 bits (259), Expect = 1.747e-60
Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWGTTSWIH*GLLP---DNPRLWNV*KRLNQ*AIITGQEVAAED 645
            HS GM+VDDE+V++GSANINQRS+EGTRDTEIAMG YQP ++WA+    P GQI+GYRMSLW      H G L    + P      +R+ Q + +   + AAE+
Sbjct:  707 HSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAE----HLGFLEQEFEEPENMECVRRVRQLSELNWGQYAAEE 806

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.319e-51
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLW 528
            H+ GMIVDDEYV++GSANINQRSM GT+DTEIAMGAYQP +TWA    HP GQ+YGYRMSLW
Sbjct:  718 HAKGMIVDDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLW 779

HSP 2 Score: 107.842 bits (268), Expect = 1.319e-51
Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = 2

Query:   38 LIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGN 328
            LIPME+ALKI  KIRA ERFA Y+VIP+WPEG P     Q IL+WQ +TMQMMY+ I K L  V  +    P DYLNF+CLG RE +     + +G+
Sbjct:  608 LIPMELALKIVSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMMYDVIAKELKAV--QSDAHPLDYLNFYCLGKREQLPDDMPATNGS 702

HSP 3 Score: 30.0314 bits (66), Expect = 1.319e-51
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3

Query:  567 QPETLECVKKVKSVSNNNW 623
            +P  LEC+KKV ++S  NW
Sbjct:  792 EPSDLECLKKVNTISEENW 810

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDA2_ARATH (Phospholipase D alpha 2 OS=Arabidopsis thaliana GN=PLDALPHA2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.579e-42
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 2

Query:   35 YLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREV 295
            +LIP E++LKI  KI+A E+F  Y+V+PMWPEG+P   + Q IL WQ +TM+MMY+ + KAL E GLEG   P+DYL FFCLGNREV
Sbjct:  544 HLIPKELSLKIVSKIKAGEKFKVYVVVPMWPEGIPESGSVQAILDWQKRTMEMMYKDVIKALRENGLEGE-DPRDYLTFFCLGNREV 629

HSP 2 Score: 81.2629 bits (199), Expect = 1.579e-42
Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWGTTSWIH*GLLPD 567
            H+  MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQI+G+RMSLW    + H G+L +
Sbjct:  661 HTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLSTR--QPARGQIHGFRMSLW----YEHLGMLDE 729

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.681e-42
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 2

Query:   35 YLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREV 295
            +LIP E++LKI  KI A ERF  Y+V+PMWPEGVP  A+ Q IL WQ +TM+MMY  I +AL   G+E   +P+DYL FFCLGNREV
Sbjct:  547 HLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYTDIAQALEANGIEA--NPKDYLTFFCLGNREV 631

HSP 2 Score: 84.3445 bits (207), Expect = 2.681e-42
Identity = 45/75 (60.00%), Postives = 55/75 (73.33%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWGTTSWIH*GLLPD 567
            H+  MIVDDEY+I+GSANINQRSM+G RD+EIAMGAYQP +   R      GQI+G+RMSLW    + H G+L D
Sbjct:  663 HTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLATR--QPARGQIHGFRMSLW----YEHLGMLED 731

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.703e-42
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 2

Query:   38 LIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNRE 292
            LIP EI+LKI  KI A ERF+ YIVIP+WPEG P  A+ Q IL WQ +TM+MMY  I  AL + GL+   +P+DYL FFCLGNRE
Sbjct:  552 LIPKEISLKIVSKIEAGERFSVYIVIPLWPEGKPGSASVQAILDWQRRTMEMMYTDIIIALRKKGLDA--NPRDYLTFFCLGNRE 634

HSP 2 Score: 87.4261 bits (215), Expect = 6.703e-42
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLW 528
            HS  MIVDDEY+I+GSANINQRSM+G RDTEIAMGAYQP +  +     P GQI+ +R+SLW
Sbjct:  667 HSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPSHLLSTNNMRPVGQIFSFRISLW 728

HSP 3 Score: 21.1718 bits (43), Expect = 6.703e-42
Identity = 6/18 (33.33%), Postives = 12/18 (66.67%), Query Frame = 3

Query:  570 PETLECVKKVKSVSNNNW 623
            PE+ EC++ V + ++  W
Sbjct:  742 PESEECIRMVNATADELW 759

[Close]

BLAST of EY685107 vs. ExPASy Swiss-Prot
Match: PLDA1_PIMBR (Phospholipase D alpha 1 OS=Pimpinella brachycarpa GN=PLD1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.719e-42
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 2

Query:   38 LIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREV 295
            LIP E++LKI  KI A +RF  Y+V+PMWPEG+P   + Q IL WQ +TM+MMY+ I +AL   G+E    P++YL FFCLGNREV
Sbjct:  544 LIPKELSLKIVSKIEAGKRFTVYVVLPMWPEGIPESGSVQAILDWQRRTMEMMYKDIIQALQANGIEE--DPRNYLTFFCLGNREV 627

HSP 2 Score: 83.9593 bits (206), Expect = 8.719e-42
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 1

Query:  343 HS*GMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWGTTSWIH*GLLPD 567
            H+  MIVDDEY+I+GSANINQRSM+G +D+EIAMGAYQP +   R      GQI+G+RMSLW    + H G+L D
Sbjct:  659 HAKMMIVDDEYIIIGSANINQRSMDGAKDSEIAMGAYQPHHLATR--EPARGQIHGFRMSLW----YEHLGMLDD 727

HSP 3 Score: 25.7942 bits (55), Expect = 8.719e-42
Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 3

Query:  570 PETLECVKKVKSVSNNNW 623
            PE+++CV+KV +V++  W
Sbjct:  732 PESVDCVQKVNTVADKYW 749

The following BLAST results are available for this feature:

BLAST of EY685107 vs. ExPASy Swiss-Prot

BLAST of EY685107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19


Match Name	E-value	Identity	Description
PLDB1_ARATH	7.257e-75	83.50	Phospholipase D beta 1 OS=Arabidopsis thaliana GN=...	[more]
PLDB2_ARATH	6.486e-73	78.30	Phospholipase D beta 2 OS=Arabidopsis thaliana GN=...	[more]
PLDG1_ARATH	7.239e-62	72.12	Phospholipase D gamma 1 OS=Arabidopsis thaliana GN...	[more]
PLDG3_ARATH	1.340e-60	81.40	Phospholipase D gamma 3 OS=Arabidopsis thaliana GN...	[more]
PLDG2_ARATH	1.747e-60	81.40	Phospholipase D gamma 2 OS=Arabidopsis thaliana GN...	[more]
PLDD1_ARATH	1.319e-51	77.42	Phospholipase D delta OS=Arabidopsis thaliana GN=P...	[more]
PLDA2_ARATH	1.579e-42	59.77	Phospholipase D alpha 2 OS=Arabidopsis thaliana GN...	[more]
PLDA1_MAIZE	2.681e-42	59.77	Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S...	[more]
PLDZ1_ARATH	6.703e-42	61.18	Phospholipase D zeta OS=Arabidopsis thaliana GN=PL...	[more]
PLDA1_PIMBR	8.719e-42	55.81	Phospholipase D alpha 1 OS=Pimpinella brachycarpa ...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C2-003-008-H02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY685107 ID=EY685107; Name=EY685107; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCCCCTTATTTGATTCCGATGG
AAATTGCTCTCAAGATTGCTGATAAGATCAGAGCACATGAGCGATTTGCT
GCCTATATAGTTATTCCAATGTGGCCGGAAGGCGTTCCAACTGGTGCTGC
TACACAAAGAATTTTATTTTGGCAGCACAAAACTATGCAAATGATGTATG
AGACAATCTACAAGGCATTAGTTGAGGTGGGGCTTGAGGGTGCATTCTCA
CCGCAGGACTATTTGAACTTTTTCTGTCTGGGCAATCGTGAGGTCATTGA
TCAAACTGATACTTCATTGTCTGGAAATCCAACAGCTCCGAACACTCCTG
AGGGATGATTGTTGATGATGAGTATGTGATACTGGGGTCTGCAAACATCA
ATCAGCGCTCCATGGAGGGCACAAGAGACACAGAGATTGCAATGGGAGCC
TACCAACCTGAATATACTTGGGCTAGACTGAAACATCATCCTTATGGACA
GATCTATGGATATAGAATGTCGCTATGGGGCACAACATCTTGGATACATT
GAGGACTGCTTCCGGACAACCCGAGACTCTGGAATGTGTAAAAAAGGTTA
AATCAGTAAGCAATAATAACTGGGCAGGAGGTGGCTGCAGAAGATCCATC
CTGACTTGAGGACCCCCCTTATTAGCTACCCATCTGAAACGCACCGCACA
GGCAACGGGGAGGCCACTTCCGCACTATCCACCCTGCCCCCGACGGCGCC
CGACCCCTCGATCGGCCACGCTTTAGGGCGGATAGCGACACCTCTACCCC
CTGCGACTGACATCGGCAATGACCCCCGGCAACAGCTCGGACACCAATAC
CGAGGTCGGAAATCCCACAACCACCACAACACAAGCGAAGAAAAACCCCC
CCCACCACGAC