EY685092

Overview
NameEY685092
Unique NameEY685092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1051
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685092 vs. ExPASy Swiss-Prot
Match: LTRA_KLEPN (Probable HTH-type transcriptional regulator ltrA OS=Klebsiella pneumoniae GN=ltrA PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 6.655e-41
Identity = 79/123 (64.23%), Postives = 92/123 (74.80%), Query Frame = 1 
Query:   16 DSRVDLSIRITDSPPPGLVGRQLLPIEHLICATPHYLAEHGAPQDPHDLLEHSCIYLGETPGDARWKFRQGSKAVTVGVRGRYAANHTGVRLDAVLQHVGIGSLPYFTARHALETGEVVHVVP 384
            D  +DL++RITD+P PGL G+ L+PI H+ICAT  YL +HG P  P DL  HSCI LGETP DARWKFR+  K  TV   GRYAANHT VRLDAV QH+GIGSLP FTAR AL  G++V V+P
Sbjct:  138 DDGIDLALRITDTPSPGLHGKPLMPIRHVICATEAYLQQHGTPYTPQDLRAHSCISLGETPADARWKFRREGKTETVQTYGRYAANHTAVRLDAVRQHLGIGSLPLFTAREALANGDIVQVLP 260
The following BLAST results are available for this feature:
BLAST of EY685092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LTRA_KLEPN6.655e-4164.23Probable HTH-type transcriptional regulator ltrA O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-F07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685092 ID=EY685092; Name=EY685092; organism=Citrus sinensis; type=EST; length=1051bp
CTGCAGTACGGTCGAGATTCCCGGGTCGACCTGAGCATCCGCATCACCGA
CAGCCCGCCGCCGGGCTTGGTGGGGCGCCAATTACTACCTATCGAACACT
TGATCTGCGCCACGCCGCATTACCTGGCGGAGCACGGTGCGCCGCAGGAT
CCCCATGATTTGTTGGAGCACAGTTGCATCTACCTGGGCGAGACGCCTGG
GGATGCGCGCTGGAAGTTTCGCCAGGGCAGCAAGGCGGTGACGGTCGGGG
TGCGCGGGCGGTATGCGGCGAATCACACCGGGGTGCGGCTGGATGCGGTG
TTGCAGCATGTGGGAATTGGCAGCTTGCCGTATTTCACGGCGCGGCATGC
GCTGGAAACGGGGGAGGTGGTGCACGTGGTGCCGACGCAGCATTACCGTG
CGTACGCCTTCGCACCCTTCTTACCGACCGGAGGGGGAGGGGGGGGGGGG
AAGGAACCGTGGGACGAGCCAGACCCCCTCTCGACTCACCCCTCACACTT
TTGTCTCGCACCCCACGCACCGCCACCACCAGCGCGCGGCCACCCGGCTC
GGCGCCCGGGACGCCGGAGCGAGGAGGGGGACGACGACAAACCGCCGCCC
GACCTCCTGCGCTGGACGGCCAGAGACGACACGGCAAGCGCGACGTCCAA
CACAACGCACCAAGCCCCCGCGACTCCCGGACGTCGCACACAGGCCCGGA
AGCACAGGGCCGCGCTACAGGAACACGCGCCACGTCCATCCCCCCCCAGC
CACACAGAAAAGCCCCGCACACACACCAGACCACATTCCAACCCACGCAC
CGGCGCCCACGGGAAGCTGGCGACGAGCGCGACCCCAGCACCCGCCAGCG
CTGACGTCGCCTACACCGAAGCGGGAGGACGACGATGCGCACCGGACTTC
GTCCAGGGTGGCTGTCTTCACACCGCGACTTTGCTGCGAGGAAGAAGGCA
ATGAGGTACCCATACGCAAGTACCCATACTCACCCCGCTACGGCTGACCA
AGTCCACCGACACGTGACTGCCTCCAGTCTCGCAGGGGCCGCTCCAAGCA
G
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