EY685090

Overview
NameEY685090
Unique NameEY685090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685090 vs. ExPASy Swiss-Prot
Match: CITH_KLEPN (Citrate-proton symporter OS=Klebsiella pneumoniae GN=citH PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.760e-24
Identity = 67/134 (50.00%), Postives = 80/134 (59.70%), Query Frame = -3 
Query:  301 LATQRGCRVLLDTVTGVAVCLAD---SCVVDGASLAHMRKTAWGFSFLLGMYNGAMIPALTEIMPVEVRGAGFSLAYSLGTAIFGGFTPAISTWFIHETGDKASPAYWXXXXXXXXXXXXXXLYRRASARLQVA 693
            L+ + G R +L  +T +A+  A    + + +  S   M       SF+ GMYNGAMIPALTEIMP EVR AGFSLAYSL TA+FGGFTP IST  I  TGDKASP YW              LYRR++  LQ A
Sbjct:  310 LSDRFGRRSVLIAMTLLALATAWPALTMLANAPSFLMMLSVLLWLSFIYGMYNGAMIPALTEIMPAEVRVAGFSLAYSLATAVFGGFTPVISTALIEYTGDKASPGYWMSFAAICGLLATCYLYRRSAVALQTA 443
[Close]
BLAST of EY685090 vs. ExPASy Swiss-Prot
Match: CITA_ECOLX (Citrate-proton symporter OS=Escherichia coli GN=citA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.908e-19
Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = -3 
Query:  379 FSFLLGMYNGAMIPALTEIMPVEVRGAGFSLAYSLGTAIFGGFTPAISTWFIHETGDKASPAYW 570
            FSF  GMYNGAM+ ALTE+MPV VR  GFSLA+SL TAIFGG TPAIST  +  TGDK+SP +W
Sbjct:  338 FSFFFGMYNGAMVAALTEVMPVYVRTVGFSLAFSLATAIFGGLTPAISTALVQLTGDKSSPGWW 401
[Close]
BLAST of EY685090 vs. ExPASy Swiss-Prot
Match: CITA_SALTY (Citrate-proton symporter OS=Salmonella typhimurium GN=citA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.798e-19
Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = -3 
Query:  379 FSFLLGMYNGAMIPALTEIMPVEVRGAGFSLAYSLGTAIFGGFTPAISTWFIHETGDKASPAYW 570
            FSF  GMYNGAM+ ALTE+MPV VR  GFSLA+SL TAIFGG TPAIST  +  TGDK+SP +W
Sbjct:  341 FSFFFGMYNGAMVAALTEVMPVYVRTVGFSLAFSLATAIFGGLTPAISTALVKLTGDKSSPGWW 404
[Close]
BLAST of EY685090 vs. ExPASy Swiss-Prot
Match: CITA_SALTI (Citrate-proton symporter OS=Salmonella typhi GN=citA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.798e-19
Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = -3 
Query:  379 FSFLLGMYNGAMIPALTEIMPVEVRGAGFSLAYSLGTAIFGGFTPAISTWFIHETGDKASPAYW 570
            FSF  GMYNGAM+ ALTE+MPV VR  GFSLA+SL TAIFGG TPAIST  +  TGDK+SP +W
Sbjct:  341 FSFFFGMYNGAMVAALTEVMPVYVRTVGFSLAFSLATAIFGGLTPAISTALVKLTGDKSSPGWW 404
The following BLAST results are available for this feature:
BLAST of EY685090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CITH_KLEPN1.760e-2450.00Citrate-proton symporter OS=Klebsiella pneumoniae ... [more]
CITA_ECOLX2.908e-1970.31Citrate-proton symporter OS=Escherichia coli GN=ci... [more]
CITA_SALTY3.798e-1970.31Citrate-proton symporter OS=Salmonella typhimurium... [more]
CITA_SALTI3.798e-1970.31Citrate-proton symporter OS=Salmonella typhi GN=ci... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-F03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685090 ID=EY685090; Name=EY685090; organism=Citrus sinensis; type=EST; length=980bp
CTTGCCTTGCTTGATCAGCTCATCCAACGCGTATCCGACCATGATCACCA
CGTCGGCATGTTCGCCACGGGCCAGGCGGTTGGGAATCGCTTCCGGCGCC
TTGCCCATCGACGGGCCGAGGATGGTGTCGAGGGTATCGCCGCTCTGGGT
GGCGTACTGCGCACCCAGCAACTTGTAGGCGGCGGTGAAGCCGCCGGAGG
TCATGACTTTCAGCTCTTCAGCGTGGGCGACCATCCCCAGGGAACCGATC
GCCAGTGCCGCCAGTGTTTTCAATAGGGGGTTCATCAGCGTGACTCCTCA
GGCAACTTGCAGACGGGCGCTGGCACGGCGATACAGTGCGAACGTCGCGC
ACAGGGCGCACAGTGCGGCGAACATCAGCCAGTAGGCCGGCGATGCCTTG
TCGCCCGTCTCGTGGATAAACCAGGTGGAAATCGCCGGGGTAAAACCACC
GAAAATGGCGGTCCCCAGGCTGTAGGCCAGGGAGAAGCCCGCCCCACGCA
CTTCCACCGGCATGATTTCGGTCAGGGCCGGGATCATGGCGCCGTTGTAC
ATGCCTAAGAGGAAGGAGAACCCCCACGCGGTTTTCCGCATGTGCGCTAA
GCTTGCCCCGTCGACCACGCAGGAATCCGCCAGGCACACGGCCACACCGG
TCACGGTATCCAAGAGCACTCGACAGCCGCGTTGTGTCGCCAAAGGCTCC
TGGTCAGGGCCCGCCAGAGACGGAGAAGCTAAAATCAACGCGGAAGCCCG
GAACGGCAACGCGGAAAGAGGGCAGCCGGTCGGCACAGAACAAAGCCTAG
CCGGTAGGCAGCGCGAAAGGCACGAAGGCACCGACACCAGAGAGCACCCA
CGCGACACAGGAGGCCCGCATCCAGCGCACGGGACGGTACTGGACCCATG
ACCCCAACCCCACCGGCGCCACCACCCTCAGCACCACAACGACCGATCAC
ACCANGACAGCACTCCCGTAGGCAGGGAAT
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