EY685076

Overview
NameEY685076
Unique NameEY685076
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685076 vs. ExPASy Swiss-Prot
Match: ASHH2_ARATH (Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.089e-11
Identity = 49/142 (34.51%), Postives = 62/142 (43.66%), Query Frame = 3 
Query:   12 KRKSRWDHPAETNLDPIKHKKLMLESRVLPSREDINCPDHIHNHCNKDEAVSSEDGGQITQEDVPPGFSSPFXXXXXXXXXXXXXXXXXXXVSQLRCAFDVAIAHPQGKFNSRLPVSYGIPLHILQQFGSSQAETVDSWVIA 437
            KRKSRWD P++T     K +++M    +L  + D                    +G Q  Q+D+PPGFSSP                            D   A PQ KF SRLPVSYGIPL I+ QFGS   E   +W +A
Sbjct: 1562 KRKSRWDQPSKT-----KEQRIMT---ILSQQTD------------------ETNGNQDVQDDLPPGFSSPCTDVP-----------------------DAITAQPQQKFLSRLPVSYGIPLSIVHQFGSPGKEDPTTWSVA 1654
The following BLAST results are available for this feature:
BLAST of EY685076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASHH2_ARATH6.089e-1134.51Histone-lysine N-methyltransferase ASHH2 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685076 ID=EY685076; Name=EY685076; organism=Citrus sinensis; type=EST; length=942bp
CCACGCGTCCGAAACGTAAAAGTCGATGGGATCATCCTGCTGAGACAAAC
CTAGATCCAATCAAGCACAAGAAATTGATGCTCGAGTCGAGGGTGTTACC
GAGTAGAGAGGACATCAATTGTCCTGATCATATTCACAATCACTGTAACA
AAGATGAAGCTGTTAGCTCCGAAGATGGAGGACAGATCACACAAGAGGAT
GTTCCACCCGGTTTTTCATCTCCGTTTAACCCTCCTCTGGTTTCATCCGA
TTCTTCATCAACTACTGACCTGTCTCAACAAAATGTTTCACAGTTGAGAT
GTGCATTTGATGTGGCTATTGCACATCCTCAGGGAAAATTCAATTCCCGC
CTACCTGTGTCTTATGGAATTCCATTGCATATTTTGCAGCAGTTTGGGTC
ATCCCAGGCTGAAACTGTTGATAGTTGGGTTATCGCTCCCAGCATGCCTT
TTCATCCTTTTCCACCTTTACCCCCCTTTCCCCGTGATAAGAAAGACACT
CCACCTGCCTCTGCTGTTAGTTGTAAAACCATTGATGGACCTGCAGAAGA
ATGGCAACAAGATAGCAATCATGCACCCCCTTGCTGTCCAGATGAAGACA
ATCCAAGCATGACTGGAGCTAACCAGTCAGATGCAGACATTCCGGGCACA
CACGGACAACACACGTTTTAAAAGAATGAGGGGATCCTCTAATGGTCTGG
GAAAAAGATACTTCAGGCAGCAAAAAAGGAAGGGACCCCTTTGGCTTTGG
AAGAAAAATGAACTTTAGAAGTTTTTATTGGTTCCAGGAATGTTAGTGGA
AGGGGGGAATAACCGGGCCGTAAGTTTTTTCCCGGCCCCACCACACAAAA
ATACTCCCTGGATTTGTTTTTTTAGAAAATATTCTGAAAAAAAAAATTGG
AAATTTCTTTCCCAAACACAAGGGGATTCTCTGAGACTCTTT
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