EY685069

Overview
NameEY685069
Unique NameEY685069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1002
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685069 vs. ExPASy Swiss-Prot
Match: FATB_GOSHI (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 3.057e-88
Identity = 149/187 (79.68%), Postives = 170/187 (90.91%), Query Frame = 2
Query:    2 MNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEY 562
            MNHLQETA+NH  +AGLL  GFGATP M KKNLIWVVTRMQVVVDRYPTW DVV V+TWVSASGKNGMRRDWL+ N++TGE LTRATS+WVMMNKLTRRLSK+P+EVR EIEP+F+NSDPV+ EDS+KL KL DSTA++V +GLTP+WSDLDVNQHVNNVKYIGWILESAP  ILESH+L+++TLEY
Sbjct:  157 MNHLQETAINHCRSAGLLGEGFGATPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVSNSETGEILTRATSVWVMMNKLTRRLSKIPEEVRGEIEPFFMNSDPVLAEDSQKLVKLDDSTAEHVCKGLTPKWSDLDVNQHVNNVKYIGWILESAPLPILESHELSALTLEY 343          

HSP 2 Score: 32.3426 bits (72), Expect = 3.057e-88
Identity = 16/28 (57.14%), Postives = 17/28 (60.71%), Query Frame = 3
Query:  567 RECGRDSVLQSLTGCLKQGTWQLCELGE 650
            RECGRDSVLQSLT      T     +GE
Sbjct:  345 RECGRDSVLQSLTTVSDSNTENAVNVGE 372          
BLAST of EY685069 vs. ExPASy Swiss-Prot
Match: FATB_CUPHO (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 1.972e-78
Identity = 132/187 (70.59%), Postives = 159/187 (85.03%), Query Frame = 2
Query:    2 MNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEY 562
            MNHLQETALNHV  AGL + GFG TP M K++LIWVV +MQV+V+RYPTW D V V TWV+ SGKNGMRRDWLI +  TGE LTRA+S+WVMMN+ TRRLSK+PDEVR EIEP+F++S PV+++D RKLPKL + TAD +R+GLTPRW+DLDVNQHVNNVKYIGWILES P ++LE+ +L S+TLEY
Sbjct:  161 MNHLQETALNHVKIAGLSNDGFGRTPEMYKRDLIWVVAKMQVMVNRYPTWGDTVEVNTWVAKSGKNGMRRDWLISDCNTGEILTRASSVWVMMNQKTRRLSKIPDEVRNEIEPHFVDSPPVIEDDDRKLPKLDEKTADSIRKGLTPRWNDLDVNQHVNNVKYIGWILESTPPEVLETQELCSLTLEY 347          

HSP 2 Score: 27.335 bits (59), Expect = 1.972e-78
Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 3
Query:  567 RECGRDSVLQSLT 605
            RECGR+SVL+SLT
Sbjct:  349 RECGRESVLESLT 361          
BLAST of EY685069 vs. ExPASy Swiss-Prot
Match: FATB_UMBCA (Lauroyl-acyl carrier protein thioesterase, chloroplastic OS=Umbellularia californica GN=FATB1 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.629e-65
Identity = 113/187 (60.43%), Postives = 142/187 (75.94%), Query Frame = 2
Query:    2 MNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEY 562
            MNH+QE  LNH  + G+L  GFG T  M+K++L+WVV R  V V+RYPTW D V VE W+ ASG NGMRRD+L+R+ KTGE LTR TSL V+MN  TRRLS +PDEVR EI P F+++  V D++ +KL KL DSTADY++ GLTPRW+DLDVNQHVNN+KY+ W+ E+ P  I ESH ++S TLEY
Sbjct:  130 MNHMQEATLNHAKSVGILGDGFGTTLEMSKRDLMWVVRRTHVAVERYPTWGDTVEVECWIGASGNNGMRRDFLVRDCKTGEILTRCTSLSVLMNTRTRRLSTIPDEVRGEIGPAFIDNVAVKDDEIKKLQKLNDSTADYIQGGLTPRWNDLDVNQHVNNLKYVAWVFETVPDSIFESHHISSFTLEY 316          

HSP 2 Score: 25.409 bits (54), Expect = 1.629e-65
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  567 RECGRDSVLQSLT 605
            REC RDSVL+SLT
Sbjct:  318 RECTRDSVLRSLT 330          
BLAST of EY685069 vs. ExPASy Swiss-Prot
Match: FATB_CINCA (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cinnamomum camphora GN=FATB1 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 4.711e-65
Identity = 115/187 (61.50%), Postives = 141/187 (75.40%), Query Frame = 2
Query:    2 MNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEY 562
            MNHLQE ALNH  + G+L  GFG T  M+K++LIWVV R  V V+RYP W D V VE WV ASG NG R D+L+R+ KTGE LTR TSL VMMN  TRRLSK+P+EVR EI P F+++  V DE+ +K  KL DSTADY++ GLTPRW+DLD+NQHVNN+KY+ WILE+ P  I ESH ++S T+EY
Sbjct:  130 MNHLQEAALNHAKSVGILGDGFGTTLEMSKRDLIWVVKRTHVAVERYPAWGDTVEVECWVGASGNNGRRHDFLVRDCKTGEILTRCTSLSVMMNTRTRRLSKIPEEVRGEIGPAFIDNVAVKDEEIKKPQKLNDSTADYIQGGLTPRWNDLDINQHVNNIKYVDWILETVPDSIFESHHISSFTIEY 316          

HSP 2 Score: 24.6386 bits (52), Expect = 4.711e-65
Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  567 RECGRDSVLQSLT 605
            REC  DSVLQSLT
Sbjct:  318 RECTMDSVLQSLT 330          
BLAST of EY685069 vs. ExPASy Swiss-Prot
Match: FATA_CORSA (Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum GN=FATA PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 6.425e-46
Identity = 89/190 (46.84%), Postives = 126/190 (66.32%), Query Frame = 2
Query:    5 NHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPV--VDEDSRKLPKLG--DSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEY 562
            N LQE   NH  + G    GF  TP M K +LIWV  RM + + RYP W+DVV +ETW  + G+ G RRDW+I++  T E + RATS WVMMN+ TRRL K+ D+VR E   +   +  +   +E+++ L K+   +  A + R GL+PR +DLD+NQHVNNV YIGW+LES P+++L +H+L ++TL+Y
Sbjct:  106 NLLQEVGGNHAQSVGFSTDGFATTPTMRKLHLIWVTARMHIEIYRYPAWSDVVEIETWCQSEGRIGTRRDWIIKDFATDEVIGRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPKTPRLSFPEENNKSLKKISKLEDPAQHSRLGLSPRRADLDMNQHVNNVAYIGWVLESIPKEVLYTHELETITLDY 295          
The following BLAST results are available for this feature:
BLAST of EY685069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FATB_GOSHI3.057e-8879.68Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_CUPHO1.972e-7870.59Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_UMBCA1.629e-6560.43Lauroyl-acyl carrier protein thioesterase, chlorop... [more]
FATB_CINCA4.711e-6561.50Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATA_CORSA6.425e-4646.84Oleoyl-acyl carrier protein thioesterase, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685069 ID=EY685069; Name=EY685069; organism=Citrus sinensis; type=EST; length=1002bp
AATGAATCATTTACAGGAAACAGCGCTTAATCATGTTATGACTGCTGGTC
TTCTAGATGCTGGCTTTGGTGCAACCCCAGCGATGGCTAAAAAGAACCTG
ATATGGGTGGTTACTCGGATGCAGGTTGTTGTAGACCGCTATCCCACTTG
GAATGATGTTGTAAATGTAGAAACTTGGGTTAGTGCATCTGGAAAAAATG
GTATGCGGCGTGATTGGCTCATTCGCAATGCTAAGACAGGTGAAACATTA
ACAAGAGCAACCAGTCTGTGGGTAATGATGAATAAACTGACTAGGAGGTT
GTCCAAAATGCCCGATGAAGTTCGTCAGGAAATTGAACCGTATTTTCTGA
ATTCTGACCCTGTTGTCGATGAGGATAGCAGGAAATTACCAAAACTTGGC
GACAGTACTGCAGATTATGTTCGTAGAGGTTTAACTCCTAGGTGGAGTGA
TTTAGATGTCAACCAGCATGTCAATAATGTGAAGTACATTGGCTGGATCC
TAGAGAGTGCTCCTCAGCAGATCTTGGAGAGTCATCAGCTGGCATCTGTG
ACCCTGGAGTATTACGAGGGAGTGCGGAAGGGACAGTGTGTTGCAGTCCC
TGACTGGCTGTCTCAAACAAGGAACTTGGCAATTGTGTGAACTTGGAGAG
TGTGGGATGCCCGCCCATTGCTCCCAATATAGGAAGGCGCTCAACCTGTT
AAAAAAGCGCACGTGCATGAAGGCCACCGCAATCCCACACGATGGACCAA
CGCGCGACCGGCCCCCCGCCGCAAGCCACTGAACCCCCACAACCTTCCCG
GCGAAGACGGGCCCGCACGCGGAAAGGCTGCCAACATCGGCGCCCCCACA
TACCCTCACGTCCGCCCCGCCCACCAACCAAACCCCAACACAACACGCCC
CACGACCCAGCACTGCGGCCACACGAACACGGCGCAACGCCCCCACCATA
CGCCACATCGGCACCACCCCTCACCAGGGCCAACCAAGCGCGCACGAACA
CC
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