EY685019

Overview
NameEY685019
Unique NameEY685019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length350
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2414 contig Csv1_Contig2414:276..625. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685019 vs. ExPASy Swiss-Prot
Match: GAPN_WHEAT (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Triticum aestivum GN=GAPN PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 7.854e-16
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 1
Query:   13 FPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTPSYTVG 135
            FPFQGLKDSGIGSQGITNSINMMTK+KSTVINLP+PSYT+G
Sbjct:  456 FPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPSPSYTMG 496          
BLAST of EY685019 vs. ExPASy Swiss-Prot
Match: GAPN_NICPL (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.026e-15
Identity = 37/41 (90.24%), Postives = 41/41 (100.00%), Query Frame = 1
Query:   13 FPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTPSYTVG 135
            FPFQG+KDSGIGSQGITNSINMMTK+K+TVINLPTPSYT+G
Sbjct:  456 FPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPTPSYTMG 496          
BLAST of EY685019 vs. ExPASy Swiss-Prot
Match: GAPN_APIGR (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.340e-15
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 1
Query:   13 FPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTPSYTVG 135
            FPFQGLKDSGIGSQGITNSINMMTKIK+TVINLP+PSYT+G
Sbjct:  456 FPFQGLKDSGIGSQGITNSINMMTKIKTTVINLPSPSYTMG 496          
BLAST of EY685019 vs. ExPASy Swiss-Prot
Match: GAPN_PEA (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Pisum sativum GN=GAPN PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.984e-15
Identity = 36/41 (87.80%), Postives = 41/41 (100.00%), Query Frame = 1
Query:   13 FPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTPSYTVG 135
            FPFQG+KDSGIGSQGITNSINMMTK+K+TVINLP+PSYT+G
Sbjct:  456 FPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPSPSYTMG 496          
BLAST of EY685019 vs. ExPASy Swiss-Prot
Match: GAPN_ARATH (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Arabidopsis thaliana GN=ALDH11A3 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 5.091e-15
Identity = 35/41 (85.37%), Postives = 41/41 (100.00%), Query Frame = 1
Query:   13 FPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTPSYTVG 135
            FPFQGLKDSGIGSQG+TNSIN+MTK+K+TVINLPTPSY++G
Sbjct:  456 FPFQGLKDSGIGSQGVTNSINLMTKVKTTVINLPTPSYSMG 496          
BLAST of EY685019 vs. ExPASy Swiss-Prot
Match: GAPN_MAIZE (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays GN=GPN1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.648e-15
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 1
Query:   13 FPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTPSYTVG 135
            F FQGLKDSGIGSQGITNSINMMTK+KSTVINLP+PSYT+G
Sbjct:  458 FSFQGLKDSGIGSQGITNSINMMTKVKSTVINLPSPSYTMG 498          
The following BLAST results are available for this feature:
BLAST of EY685019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GAPN_WHEAT7.854e-1692.68NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_NICPL1.026e-1590.24NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_APIGR1.340e-1592.68NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_PEA2.984e-1587.80NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_ARATH5.091e-1585.37NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_MAIZE6.648e-1590.24NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-F07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685019 ID=EY685019; Name=EY685019; organism=Citrus sinensis; type=EST; length=350bp
CCACGCGTCCGTTTTCCTTTCCAGGGCTTAAAGGACAGCGGAATTGGTTC
ACAGGGAATCACCAATAGCATCAATATGATGACGAAAATCAAGAGCACTG
TAATCAATTTACCAACCCCGTCTTACACCGTAGGTTGATGATAATTAATA
GGAGCATCGAGCTACACTCACCTTATAGAGTACATGTTATCTATCTACCT
AGAGTATATAACTGGCAAAATAAAATCACTGTATGTTATCTTCCTTGCCT
TCACGGGCAAGTAATCGGCACTTGCATGTACCCACAAGTTTCTTGTGGTT
ATCTTATTGTTTAAATTGGCTCTGGTTATATAAGTAAAAAAAAAAAAAAA
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