EY710315

Overview
NameEY710315
Unique NameEY710315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1094
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710315 vs. ExPASy Swiss-Prot
Match: SUGT1_HUMAN (Suppressor of G2 allele of SKP1 homolog OS=Homo sapiens GN=SUGT1 PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 4.254e-33
Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 1
Query:   94 KYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSPIWKKVG 642
            K ++++YQ   +VV+T+  K +   +V V+F E+ LS  + +P  E Y+ +  L   IIP +  ++VLSTK+EI+L K E ++W  LE       P++          +  YPSS P   +WDKL  ++        L+GDAALN+ FQ+IY+D  ++ +RAM KSF+ES GTVLS  W  VG
Sbjct:  171 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQF-----VADVKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVG 348          

HSP 2 Score: 22.7126 bits (47), Expect = 4.254e-33
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  647 KKVEGSPPDGREMKKW 694
            +KVE +PPD  E KK+
Sbjct:  350 RKVEINPPDDMEWKKY 365          
BLAST of EY710315 vs. ExPASy Swiss-Prot
Match: SUGT1_MOUSE (Suppressor of G2 allele of SKP1 homolog OS=Mus musculus GN=Sugt1 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 3.510e-32
Identity = 71/194 (36.60%), Postives = 110/194 (56.70%), Query Frame = 1
Query:   61 NEAAMAAPARPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSPIWKKVG 642
            +E + +   + K ++++YQ    V++T+  K +   +V V F E+ LS  + +P  E Y  + RL   IIP +  ++VLSTK+EI++ K E ++W  LE       P++      +   +  YPSS     +WDKL  ++        L+GDAALNK FQ+IY+D  ++ +RAM KSF+ES GTVLS  W  VG
Sbjct:  131 SEVSASQRTQSKIKYDWYQTESHVIITLMIKSVQKNDVRVGFSERELSALVKIPAGEDYSLKLRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDEPTPKQF-----TADVKNMYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVG 319          
BLAST of EY710315 vs. ExPASy Swiss-Prot
Match: SUGT1_RAT (Suppressor of G2 allele of SKP1 homolog OS=Rattus norvegicus GN=Sugt1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 5.978e-32
Identity = 71/193 (36.79%), Postives = 109/193 (56.48%), Query Frame = 1
Query:   64 EAAMAAPARPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSPIWKKVG 642
            E + +   + K ++++YQ    V++T+  K +   +V VDF E+ LS  + +P  E    + RL   IIP +  ++VLSTK+EI++ K E ++W  LE       P++      +   +  YPSS     +WDKL  ++        L+GDAALNK FQ+IY+D  ++ +RAM KSF+ES GTVLS  W  VG
Sbjct:  132 EVSASQRTQSKIKYDWYQTESHVIITLMIKNVQKNDVRVDFSEKELSAVVKIPSGEDCSLKLRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDVPAPKQF-----TADVKNMYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVG 319          

HSP 2 Score: 21.1718 bits (43), Expect = 5.978e-32
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  647 KKVEGSPPDGREMKKW 694
            +KVE +PPD  E K++
Sbjct:  321 RKVEINPPDDMEWKQY 336          
BLAST of EY710315 vs. ExPASy Swiss-Prot
Match: SUGT1_BOVIN (Suppressor of G2 allele of SKP1 homolog OS=Bos taurus GN=SUGT1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.784e-32
Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 1
Query:   94 KYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSPIWKKVG 642
            K ++++YQ   +V++T+  K +   +V V+F E+ LS  + +P  + Y  + RL   IIP +  ++VLSTK+EI++ K E ++W  LE  +G V     N        +  YPSS     +WDKL  ++        L+GDAALNK FQ+IY+D  ++ +RAM KSF+ES GTVLS  W  VG
Sbjct:  144 KIKYDWYQTESQVIITLMIKNVQKNDVNVEFSEKELSALVKLPSGDDYSLKLRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLE-GQGDVP----NPKPFIADVKNLYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVG 321          

HSP 2 Score: 22.7126 bits (47), Expect = 7.784e-32
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  647 KKVEGSPPDGREMKKW 694
            +KVE +PPD  E KK+
Sbjct:  323 RKVEINPPDDMEWKKY 338          
BLAST of EY710315 vs. ExPASy Swiss-Prot
Match: SUGT1_DICDI (Protein SUGT1 homolog OS=Dictyostelium discoideum GN=sugt1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.711e-28
Identity = 69/186 (37.10%), Postives = 103/186 (55.38%), Query Frame = 1
Query:   94 KYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSPIWKKVGFKE 651
            K RHE+YQ    VV+T+FAK + A N  ++   + +++S  +     + F+  LF  I+         STKVEI++ K+  I+W +LEF+  +     ++  S S    P  PS   ++ DWDKL  +         L+GD ALNK F++I++   ED +RAM KSF ES GTVLS  W +VG K+
Sbjct:  195 KVRHEWYQTETHVVLTIFAKFVTASNSKINLTSKSVNISFPLANGSEFLFEMDLFDPIVDKDSTIHYYSTKVEIKMKKSRAIKWDTLEFTDKSGPVGLMDQISSS----PAVPSPYASKKDWDKLPNE-----PEEKLEGDQALNKIFRDIFSKGSEDQQRAMMKSFTESGGTVLSTNWDEVGSKK 371          

HSP 2 Score: 26.5646 bits (57), Expect = 4.711e-28
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  644 SKKVEGSPPDGREMKKWE 697
            SKKV G PP G E K++E
Sbjct:  369 SKKVVGEPPKGLEFKQYE 386          
BLAST of EY710315 vs. ExPASy Swiss-Prot
Match: SGT1_YEAST (Protein SGT1 OS=Saccharomyces cerevisiae GN=SGT1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.825e-20
Identity = 69/227 (30.40%), Postives = 105/227 (46.26%), Query Frame = 1
Query:   19 EFRVDPASAVMDVSNEAAMAAPAR-PKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDF-----GEQILSVSIDVP--GEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFS------------KGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSPIWKKV 639
            E R D  S+   +S      AP   PK++ ++YQ    V +++F   +P     V+        + LS+S  VP  G E + +  +L  ++ P     ++   K+EI L+K +  QW  LE              K +    R+ +   +   R +YPSS   ++DW KL+            D       FFQ++YA AD DT+RAM KSF+ESNGT LS  W+ V
Sbjct:  158 ENRGDNNSSHSPISPLKIETAPQESPKFKIDWYQSSTSVTISLFTVNLPESKEQVNIYISPNDRRTLSISYQVPKSGSE-FQYNAKLSHEVDPKAVSLKIFPKKLEITLSKIDSTQWKKLEEDILTESSRLSDEGKNSDSATRLLSAETASKERLSYPSSSKKKIDWSKLDIDEEADEEAGSADS------FFQKLYAGADPDTKRAMMKSFIESNGTALSTDWEDV 377          

HSP 2 Score: 22.3274 bits (46), Expect = 2.825e-20
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  653 VEGSPPDGREMKKW 694
            V+ SPP+G E K W
Sbjct:  382 VKTSPPEGMEPKHW 395          
BLAST of EY710315 vs. ExPASy Swiss-Prot
Match: GIT7_SCHPO (Glucose-insensitive transcription protein 7 OS=Schizosaccharomyces pombe GN=git7 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.986e-15
Identity = 57/187 (30.48%), Postives = 92/187 (49.20%), Query Frame = 1
Query:   94 KYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQ-PRLFGKIIPAKCRYEVLSTKVEIRLAK-AEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSPIWKKVGFK 648
            + R+++ Q    + + ++AK +  ++V++   +  L + I +     +      L+ +I+P K  +++ S+KVEI L K    I+W +L  S        VN  +   +      ++K    DWD L              G+AAL   FQ +Y +AD+DTRRAM KS+ ESNGT LS  WK V  K
Sbjct:  183 RIRYDWSQTSFSLNIDIYAKKVKDEDVSLLMEKNTLKIEIKLEDGSIFSLVLDPLYEEIVPEKSSFKLFSSKVEITLIKKVSEIKWEALVKSPAN---NSVNVYAKDSNHSSASGNTKNKAKDWDSLAKLADLEEDEPT--GEAALANLFQNLYKNADDDTRRAMMKSYTESNGTALSTNWKDVKSK 364          
The following BLAST results are available for this feature:
BLAST of EY710315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SUGT1_HUMAN4.254e-3338.80Suppressor of G2 allele of SKP1 homolog OS=Homo sa... [more]
SUGT1_MOUSE3.510e-3236.60Suppressor of G2 allele of SKP1 homolog OS=Mus mus... [more]
SUGT1_RAT5.978e-3236.79Suppressor of G2 allele of SKP1 homolog OS=Rattus ... [more]
SUGT1_BOVIN7.784e-3238.80Suppressor of G2 allele of SKP1 homolog OS=Bos tau... [more]
SUGT1_DICDI4.711e-2837.10Protein SUGT1 homolog OS=Dictyostelium discoideum ... [more]
SGT1_YEAST2.825e-2030.40Protein SGT1 OS=Saccharomyces cerevisiae GN=SGT1 P... [more]
GIT7_SCHPO2.986e-1530.48Glucose-insensitive transcription protein 7 OS=Sch... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-D07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710315 ID=EY710315; Name=EY710315; organism=Citrus sinensis; type=EST; length=1094bp
GACCTGCGGTACCGGTCGGAATTCCGGGTCGACCCCGCGTCCGCAGTGAT
GGATGTTTCCAATGAGGCTGCGATGGCTGCACCAGCCAGACCAAAATACA
GGCATGAATTTTACCAGAAGCCTGAGGAAGTAGTTGTTACTGTGTTTGCA
AAGGGCATACCTGCCAAAAATGTTACAGTTGACTTTGGGGAACAAATACT
AAGTGTTAGTATTGATGTTCCTGGTGAAGAGGCATATCATTTTCAACCTC
GCTTATTTGGAAAGATAATACCTGCCAAATGCAGATATGAAGTCCTCTCA
ACCAAAGTTGAAATCCGCCTTGCTAAAGCTGAACCAATACAATGGTCGTC
TCTTGAATTCAGCAAGGGAGCTGTAGTTCCTCAAAGGGTTAATACACCAT
CCGTTTCTGGATCACCAAGACCCACCTACCCTTCCTCAAAACCGACAAGA
GTAGATTGGGACAAGCTTGAAGCTCAAGTGAAGAAGGAGGAAAAAGAAGA
AAAGCTAGATGGTGATGCAGCATTGAACAAATTTTTCCAGGAGATTTATG
CTGATGCAGATGAGGACACAAGACGAGCCATGAAAAAGTCTTTCGTCGAG
TCAAACGGGACGGTGCTCTCCCCAATTTGGAAAAAAGTTGGTTTCAAAGA
AGGTGGAAGGAAGTCCACCTGATGGCAGGGAAATGAAAAAATGGGAATAC
TAAACTTCCCCTTCTCCCCTTTTATTGGAAAAATTGTAAATTTAAAACTT
TTTGAATTTTTGGTCCCTAAACTTTTTCTTTTTCCTCCCCTTCTTTCCGG
AATCTAAAGTTTTCCTTTGGTGGCCCCGTTTGGGGCTGGAGGGGCCAAAA
ACCTTTTAGGGGCTTAAATAAAAAAAAAAAAAAAAAAAAAAACCGGGCGG
CCCCGCCCTAAGAAGAATATCAAGGCTTATAGAACACCCCGGGGGCCGTA
GGCGAACCCCTCATAACCCCCTTTCCTTAAAGGTGGGGGCCACCAAAAAA
AATTTTAAATTTTTCCAGGGGGGCCGCGCGCCCCTTTTTTTTTCCAACCA
CGCTCCCGTGGGAGGGGGGGGGGGGGAAAAATAACACCCCCCTC
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