EY710314

Overview
NameEY710314
Unique NameEY710314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1236
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710314 vs. ExPASy Swiss-Prot
Match: ILVH_SYNY3 (Acetolactate synthase small subunit OS=Synechocystis sp. (strain PCC 6803) GN=ilvH PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.526e-18
Identity = 39/58 (67.24%), Postives = 49/58 (84.48%), Query Frame = 3
Query:   90 EIMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRRE 263
            E++ L  +FRA++VDISE  +TIEV GDPGKMVA+ + L+KFGIKE+ARTGKIAL RE
Sbjct:  100 EVIELAQVFRARIVDISEDTVTIEVVGDPGKMVAILQMLAKFGIKEVARTGKIALVRE 157          

HSP 2 Score: 33.113 bits (74), Expect = 2.526e-18
Identity = 15/29 (51.72%), Postives = 21/29 (72.41%), Query Frame = 2
Query:    2 IKVEDISNEPHVERELMLIKLNGDTSTXA 88
            IKV+DI+  P VERELML+K++ +    A
Sbjct:   71 IKVQDITETPCVERELMLVKVSANAPNRA 99          
BLAST of EY710314 vs. ExPASy Swiss-Prot
Match: ILVH_CYACA (Acetolactate synthase small subunit OS=Cyanidium caldarium GN=ilvH PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.222e-18
Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 3
Query:   87 PEIMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 260
            PEI+ ++ +FRAKVVD+SE+ L +E+TGDPGK+ A+Q+ L KFGI E+ARTGKIAL R
Sbjct:   99 PEILSILQVFRAKVVDLSENLLVLELTGDPGKVAAIQQLLQKFGIIEIARTGKIALTR 156          

HSP 2 Score: 33.113 bits (74), Expect = 7.222e-18
Identity = 14/27 (51.85%), Postives = 22/27 (81.48%), Query Frame = 2
Query:    2 IKVEDISNEPHVERELMLIKLNGDTST 82
            +KV++I+  P VEREL+L+K+N  TS+
Sbjct:   71 LKVDNITEIPCVERELILVKINASTSS 97          
BLAST of EY710314 vs. ExPASy Swiss-Prot
Match: ILVH_GUITH (Acetolactate synthase small subunit OS=Guillardia theta GN=ilvH PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.067e-17
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 3
Query:   90 EIMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRRE 263
            E + +++IFRAKVVD+SE  L IEVTGDPGK+VA+++ LSKF I E+ RTGKI+L RE
Sbjct:  100 EALDIINIFRAKVVDLSEDFLIIEVTGDPGKIVAIEQILSKFTISEIVRTGKISLVRE 157          

HSP 2 Score: 36.1946 bits (82), Expect = 2.067e-17
Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 2
Query:    2 IKVEDISNEPHVERELMLIKLNGDT 76
            +KVEDI+N P VERELMLIKL   T
Sbjct:   71 LKVEDITNLPTVERELMLIKLRVST 95          
BLAST of EY710314 vs. ExPASy Swiss-Prot
Match: ILVH_PORYE (Acetolactate synthase small subunit OS=Porphyra yezoensis GN=ilvH PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.848e-16
Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 3
Query:   90 EIMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 260
            E + +V IFRAK+VDI+E  L IEVTGDPGK+VA+++ L+KFGI E+ARTGKI L R
Sbjct:  100 EALEIVRIFRAKIVDIAEDLLIIEVTGDPGKIVAIEQLLTKFGIIEIARTGKILLVR 156          

HSP 2 Score: 33.4982 bits (75), Expect = 2.848e-16
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 2
Query:    2 IKVEDISNEPHVERELMLIK--LNGDTSTXA 88
            + V+D++N P VERELMLIK  +N  T T A
Sbjct:   71 LNVQDVTNIPSVERELMLIKIQINSQTRTEA 101          
BLAST of EY710314 vs. ExPASy Swiss-Prot
Match: ILVH_GALSU (Acetolactate synthase small subunit OS=Galdieria sulphuraria GN=ilvH PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.693e-16
Identity = 34/58 (58.62%), Postives = 48/58 (82.76%), Query Frame = 3
Query:   90 EIMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRRE 263
            EI+ + +IFRA+VVD+SE  + +E+TGDPGK+ A+++ L K+GI E+ARTGKIAL RE
Sbjct:  100 EILEIANIFRARVVDLSESFIILEITGDPGKIAAIEKLLEKYGICEIARTGKIALTRE 157          

HSP 2 Score: 32.3426 bits (72), Expect = 3.693e-16
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 2
Query:    2 IKVEDISNEPHVERELMLIKL 64
            +K++DI+N P VERELMLIK+
Sbjct:   71 LKIQDITNIPCVERELMLIKV 91          
BLAST of EY710314 vs. ExPASy Swiss-Prot
Match: ILVH_PORPU (Acetolactate synthase small subunit OS=Porphyra purpurea GN=ilvH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.017e-15
Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 3
Query:   90 EIMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRR 260
            E + +V IFRA VVDI+E  + +EVTGDPGK+VA+++ L+KFGI E+ARTGKI+L R
Sbjct:  100 EALEIVKIFRANVVDIAEDLIIVEVTGDPGKIVAIEQLLTKFGIIEIARTGKISLVR 156          

HSP 2 Score: 31.5722 bits (70), Expect = 3.017e-15
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 2
Query:    2 IKVEDISNEPHVERELMLIKL 64
            + V+D++N P VERELMLIK+
Sbjct:   71 LNVQDVTNIPSVERELMLIKI 91          
BLAST of EY710314 vs. ExPASy Swiss-Prot
Match: ILVH_AQUAE (Acetolactate synthase small subunit OS=Aquifex aeolicus GN=ilvH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.356e-14
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 3
Query:   90 EIMWLVDIFRAKVVDISEHALTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRRE 263
            E++ + +IFR KVVD+S    TIEVTGD  K+ A+   L  FGIKE+ARTGK+A+RRE
Sbjct:  126 EVLRITEIFRGKVVDVSPDTYTIEVTGDEDKINAMIELLKPFGIKEMARTGKVAMRRE 183          

HSP 2 Score: 31.5722 bits (70), Expect = 5.356e-14
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 2
Query:    2 IKVEDISNEPHVERELMLIKL 64
            +KV D+++ PHVEREL LIK+
Sbjct:   96 LKVSDLTDVPHVERELALIKV 116          
The following BLAST results are available for this feature:
BLAST of EY710314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ILVH_SYNY32.526e-1867.24Acetolactate synthase small subunit OS=Synechocyst... [more]
ILVH_CYACA7.222e-1863.79Acetolactate synthase small subunit OS=Cyanidium c... [more]
ILVH_GUITH2.067e-1763.79Acetolactate synthase small subunit OS=Guillardia ... [more]
ILVH_PORYE2.848e-1664.91Acetolactate synthase small subunit OS=Porphyra ye... [more]
ILVH_GALSU3.693e-1658.62Acetolactate synthase small subunit OS=Galdieria s... [more]
ILVH_PORPU3.017e-1561.40Acetolactate synthase small subunit OS=Porphyra pu... [more]
ILVH_AQUAE5.356e-1456.90Acetolactate synthase small subunit OS=Aquifex aeo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-D06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710314 ID=EY710314; Name=EY710314; organism=Citrus sinensis; type=EST; length=1236bp
CATAAAGGTAGAAGACATCTCAAATGAGCCACATGTAGAGCGTGAACTGA
TGCTTATAAAACTTAATGGTGATACTAGTACCNTGGCCTGAGATCATGTG
GTTGGTGGACATCTTCAGAGCAAAAGTTGTAGATATCTCAGAACATGCCC
TGACCATTGAGGTCACTGGGGACCCTGGGAAGATGGTAGCTGTTCAGAGA
AACCTAAGCAAGTTTGGCATAAAAGAACTTGCAAGAACTGGAAAGATTGC
ACTGAGACGGGAAAAACTGGGTGATACTGCTCCCTTTTGGAACTTTTCAG
CAGCCTCTTATCCAGATCTTGAAGAGAGAAAGCGAACTGGTATTTTTATA
CCAGAGACTAATCAGTCTCTAAATGGAAATGCAAATGTCGATACATCCTC
TAGGGGTGATGTATATCCTGTGGAGCCTTATGATGACTTTTCAGCAAATC
AAGTTCTTGATGCTCATTGGGGTATTCTCTATGATGAAGATCCAAGTGGC
CTCGGTCACACCCATTATCTATGCTCGTAGAAAACACTCCCGGTGTTCTC
AAATTTGTTCCGGGGTCATATCACGAAGAGGTACAACATTCAGAGTCTTG
CTGTGGGGCGGCTGANAGGGAGGCCTTTCTTGCTCACAACTGTTGTCCTT
GAACTGATGATCATTTGGAAGTCGTTCACCTTTGCGCAGCTTATAATCTC
ACGAGGTCAGGAAATACTCCTTGCTTTGCCGAGGAAGCGTATTAGAAAGA
TGGCGGATATCGCGGGTGAGGGGGTCCTGGACTGCAAAATATCGGGCAGA
CGTTTTATTTTGCTTCATTTCTTTGACTTCTGTAATTAAAATTTTGCTTG
CCGTGTAAACCCTGAGTTGGAGTGGAGACGGGATGGTTGGCGAGAAGGGG
GAGAAATACTACGATCGGATATATAAGGGTATATGCCCCTGACTCTCAGA
GTTTCTGGATCGAACTTGACCTATGAGAATAATTTTCTTCTTTTAGNGCA
TTTCTGTATCAACATGGGCAATAAGACATTAATAAATATATTATAATATA
ATTATATTGAAAAGGGTAGATATTATAGATAAGACAGTATTAAAATACAA
ACATAACGAAGAGCAGGATATAATAAATCGTACAGAACACGGGTGAGAGG
TGTAAATGATGNAGATTATATTTACTTTGTAAATTGTATAACTGATTTAT
CATTGATTATCATTAGACGCTATTATATNGCTTATG
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