EY684968

Overview
NameEY684968
Unique NameEY684968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length356
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684968 vs. ExPASy Swiss-Prot
Match: CSK2C_ARATH (Casein kinase II subunit beta' OS=Arabidopsis thaliana GN=CKB2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11
Identity = 32/42 (76.19%), Postives = 33/42 (78.57%), Query Frame = 3 
Query:    6 IDGAYFGTTIPLLFLMTYGHLMPLKAVQSYAPRGFGF*IHKP 131
            IDGAYFGTT P LFLMTYGHL P KA QSY  R FGF +HKP
Sbjct:  241 IDGAYFGTTFPHLFLMTYGHLKPQKASQSYTQRVFGFKLHKP 282
[Close]
BLAST of EY684968 vs. ExPASy Swiss-Prot
Match: CSK2B_ARATH (Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11
Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = 3 
Query:    6 IDGAYFGTTIPLLFLMTYGHLMPLKAVQSYAPRGFGF*IHKP 131
            IDGAYFGTT P LFLMTYGHL P KA Q+Y  R FGF +HKP
Sbjct:  246 IDGAYFGTTFPHLFLMTYGHLKPAKATQNYVQRVFGFKLHKP 287
[Close]
BLAST of EY684968 vs. ExPASy Swiss-Prot
Match: CSK2D_ARATH (Casein kinase II subunit beta-3 OS=Arabidopsis thaliana GN=CKB3 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.426e-11
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 3 
Query:    6 IDGAYFGTTIPLLFLMTYGHLMPLKAVQSYAPRGFGF*IHKP 131
            IDGAYFGTT P LFLMTYG+L P K  QSY P+ FGF +HKP
Sbjct:  235 IDGAYFGTTFPHLFLMTYGNLKPQKPTQSYVPKIFGFKVHKP 276
The following BLAST results are available for this feature:
BLAST of EY684968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CSK2C_ARATH1.165e-1176.19Casein kinase II subunit beta' OS=Arabidopsis thal... [more]
CSK2B_ARATH1.165e-1173.81Casein kinase II subunit beta OS=Arabidopsis thali... [more]
CSK2D_ARATH4.426e-1171.43Casein kinase II subunit beta-3 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-A04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684968 ID=EY684968; Name=EY684968; organism=Citrus sinensis; type=EST; length=356bp
CTACAATTGATGGAGCCTATTTTGGAACGACGATTCCTCTCCTCTTCCTG
ATGACTTACGGGCACCTCATGCCACTAAAGGCAGTACAGAGCTATGCTCC
TAGAGGATTTGGGTTCTAGATTCACAAGCCTTGATATGCTGAAATGGGAA
AATGTCTAGAGTCTTCGTCCAAATTGTGTATCACTTGGCTTCCATTTGGA
AGTATGCTTTTGGCAGACTTCGTTATTATAACAATGTACGCTTCCTTTTC
TTATATATTTTGAATAGTATCATAAGCAAATTTCACCAGCATGTGAAGCG
ATTATTTGTTTTCAATTTTAGCGGCCTAAGCTTCTCTGCAAAAAAAACAA
AACAAC
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