EY684955

Overview
NameEY684955
Unique NameEY684955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684955 vs. ExPASy Swiss-Prot
Match: GDE1_YEAST (Glycerophosphodiester phosphodiesterase GDE1 OS=Saccharomyces cerevisiae GN=GDE1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 65/177 (36.72%), Postives = 97/177 (54.80%), Query Frame = 3
Query:   57 IDDSLCTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRV-------IQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEI 566
            I  S  TL+E F+++  NVGFN+E KF      E++ L ++       +  +LK+VF+ A  R IIFS+F PD  +++   Q   P+ FLT GG+E   D+R +SL+  ++   +  L GIVS    + + P  V  +K + L  +TYG  NN  E   +Q   G+D VIVD V  I
Sbjct: 1037 IASSFVTLKELFKKIPANVGFNIECKFPMLDEAEEEELGQIMMEMNHWVDTVLKVVFDNANGRDIIFSSFHPDICIMLSLKQPVIPILFLTEGGSEQMADLRASSLQNGIRFAKKWNLLGIVSAAAPILKAPRLVQVVKSNGLVCVTYGVDNNDPENASIQIEAGVDAVIVDSVLAI 1213          
BLAST of EY684955 vs. ExPASy Swiss-Prot
Match: GDE1_ASHGO (Glycerophosphodiester phosphodiesterase GDE1 OS=Ashbya gossypii GN=GDE1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 64/181 (35.36%), Postives = 96/181 (53.04%), Query Frame = 3
Query:   57 IDDSLCTLQEAFQQVDPNVGFNVELKFD--DHIVYEQDYLIRV-----IQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAV 578
            I  S  TL+E F+++  NVGFN+E K+   D    E    I V     I  +L++V++  E R +IFS+FQPD  +++   Q ++P+ FLT GGT    D+R  SL+ A++      L GIVS    +   P     +K S L  +TYG  NN  E   ++   G+D VIVD V  + + +
Sbjct: 1131 IASSFVTLKELFKKIPQNVGFNIECKYPMVDEAEEEDIGPIAVEMNHWIDTVLEVVYDNVEGRDVIFSSFQPDVCLMLSLKQPSFPILFLTEGGTAKRCDIRAASLQNAIRFAHRWNLLGIVSAAAPIVIAPRLAQIVKSSGLVCVTYGVENNDPEIARVEMDAGVDAVIVDSVLAVRKGL 1311          
BLAST of EY684955 vs. ExPASy Swiss-Prot
Match: GDE1_SCHPO (Glycerophosphodiester phosphodiesterase gde1 OS=Schizosaccharomyces pombe GN=gde1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.034e-21
Identity = 65/175 (37.14%), Postives = 94/175 (53.71%), Query Frame = 3
Query:   75 TLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRV-------IQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAV 578
            TL++  ++V  +VG NVE K+      E++ L+ +       +  IL I+ ++   R  IFS+F PD  +L+  L+ST PV FLT GGT    DVR  SL +A+K   +    GIVS  + +   P  +  +K+  LS  TYG LNN  + V  Q   G+D VIVD V  I  A+
Sbjct:  893 TLKDVLKEVPQSVGLNVEFKYPMLSEAEEEKLLPIAYDYNFYVDTILSIIKKYGGKRKYIFSSFNPDICILL-SLKSTNPVLFLTEGGTAYRTDVRAASLRQALKFASQWSFLGIVSACEPLIMCPRLIKAVKQLGLSCYTYGVLNNDVDNVRRQVRFGVDAVIVDNVLAIRRAL 1066          
BLAST of EY684955 vs. ExPASy Swiss-Prot
Match: YRS7_CAEEL (Uncharacterized protein T05H10.7 OS=Caenorhabditis elegans GN=T05H10.7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15
Identity = 61/196 (31.12%), Postives = 97/196 (49.49%), Query Frame = 3
Query:   75 TLQEAFQQVDPNVGFNVELKF---DDHIVYEQDYLIR---VIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTE---IFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGR-LNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYDMIKPAKVVEKEDNKSL 632
            TL EA  +VDP+VGFNVE+K+    ++  +E D+       +  IL  V + A NR I+FS+F PD   ++   Q+ YPV FL  G T+    F D R ++   AV       L G+    + + ++P  V K  E  +    +G  L+      Y +  +G+DGVI D + E      +  +   +VE+E  ++L
Sbjct:  534 TLLEALTKVDPDVGFNVEVKYPMMQNNGEHECDHYFERNLFVDVILADVMKHAGNRRIMFSSFDPDICSMVATKQNKYPVLFLCVGETQRYTPFQDQRTSTSMTAVNFAAGADLLGVNFNSEDLLKDPMPVKKANEFGMVTFVWGEDLDKKENINYFKKELGVDGVIYDRIGE-----EERRRNVFIVEREQKRAL 724          
BLAST of EY684955 vs. ExPASy Swiss-Prot
Match: GDE5_RAT (Putative glycerophosphodiester phosphodiesterase 5 OS=Rattus norvegicus GN=Gde5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.846e-12
Identity = 48/175 (27.43%), Postives = 86/175 (49.14%), Query Frame = 3
Query:   75 TLQEAFQQVDPNVGFNVELKF---------DDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIF---YDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 563
            +L+   + +  NVGFN+E+K+         D ++    D +   +  ILK V E +  R I+FS+F  D   ++R+ Q+ YP+ FLT G ++I+    D+R  +   A+       + GI +  + + RNP  V + K+  L +  +G   N  E        G++G+I D + +
Sbjct:  440 SLKMVLESLPENVGFNIEIKWICQHRDGVWDGNLSTYFD-MNAFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENILGINAHTEDLLRNPSYVQEAKDKGLVIFCWGDDTNDPENRRKLKEFGVNGLIYDRIYD 613          
BLAST of EY684955 vs. ExPASy Swiss-Prot
Match: GDE5_MOUSE (Putative glycerophosphodiester phosphodiesterase 5 OS=Mus musculus GN=Gde5 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.560e-12
Identity = 48/175 (27.43%), Postives = 85/175 (48.57%), Query Frame = 3
Query:   75 TLQEAFQQVDPNVGFNVELKF---------DDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIF---YDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 563
            +L+   + +  NVGFN+E+K+         D ++    D  +  +  ILK V E +  R I+FS+F  D   ++R+ Q+ YP+ FLT G ++I+    D+R  +   A+       + GI +  + + RNP  V + K   L +  +G   N  E        G++G+I D + +
Sbjct:  443 SLKMVLESLPENVGFNIEIKWICQHRDGVWDGNLSTYFDMNV-FLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENILGINAHTEDLLRNPSYVQEAKAKGLVIFCWGDDTNDPENRRKLKEFGVNGLIYDRIYD 616          
BLAST of EY684955 vs. ExPASy Swiss-Prot
Match: GDE5_HUMAN (Putative glycerophosphodiester phosphodiesterase 5 OS=Homo sapiens GN=GDE5 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 48/175 (27.43%), Postives = 85/175 (48.57%), Query Frame = 3
Query:   75 TLQEAFQQVDPNVGFNVELKF---------DDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIF---YDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 563
            +L+   + +  +VGFN+E+K+         D ++    D  +  +  ILK V E +  R I+FS+F  D   ++R+ Q+ YP+ FLT G +EI+    D+R  +   A+       L GI    + + RNP  + + K   L +  +G   N  E       +G++G+I D + +
Sbjct:  440 SLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNL-FLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSEIYPELMDLRSRTTPIAMSFAQFENLLGINVHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRRKLKELGVNGLIYDRIYD 613          
The following BLAST results are available for this feature:
BLAST of EY684955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
GDE1_YEAST4.380e-2436.72Glycerophosphodiester phosphodiesterase GDE1 OS=Sa... [more]
GDE1_ASHGO5.354e-2235.36Glycerophosphodiester phosphodiesterase GDE1 OS=As... [more]
GDE1_SCHPO2.034e-2137.14Glycerophosphodiester phosphodiesterase gde1 OS=Sc... [more]
YRS7_CAEEL3.716e-1531.12Uncharacterized protein T05H10.7 OS=Caenorhabditis... [more]
GDE5_RAT3.846e-1227.43Putative glycerophosphodiester phosphodiesterase 5... [more]
GDE5_MOUSE6.560e-1227.43Putative glycerophosphodiester phosphodiesterase 5... [more]
GDE5_HUMAN1.461e-1127.43Putative glycerophosphodiester phosphodiesterase 5... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-G06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684955 ID=EY684955; Name=EY684955; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGCGGACGCGTGGGAAAGATGGCAAAATCCTGCACTGGAAC
GTCGAAATTGACGATTCACTCTGCACACTCCAAGAGGCATTTCAACAGGT
GGATCCGAATGTGGGGTTCAACGTCGAGTTGAAATTCGATGACCACATTG
TTTACGAGCAAGATTATCTCATCAGGGTCATTCAAGCCATCTTAAAAATC
GTCTTTGAGTTTGCTGAGAACAGACCCATTATCTTCTCAACGTTTCAGCC
GGACGCCGCCGTGCTTATCAGGAAATTGCAGAGCACGTACCCTGTGTTCT
TTTTAACAAATGGGGGGACCGAAATCTTCTATGATGTGAGGAGAAATTCG
TTGGAGGAGGCTGTAAAAGTTTGTTTGGAAGGTGGGTTGCAAGGGATTGT
TTCAGAAGTTAAAGGAGTTTTCAGAAACCCTGGAGCTGTGACCAAAATTA
AAGAATCCAAGCTTTCTCTTCTCACTTATGGGAGATTGAACAATGTGGCT
GAGGCTGTGTACATGCAACATTTGATGGGTATTGATGGGGTGATTGTCGA
TTTGGTTCAAGAGATTACTGAGGCCGTTTATGATATGATTAAGCCTGCAA
AGGTTGTGGAAAAAGAGGATAATAAAAGTTTAAACGGAAAGGGTGAGGAT
GGGGAGGTTAAAACAAACCCCAGATTCCCCAGAGGAGGCTCGAAGTTTCT
CCTGAACCTAATCCCCGGAGTTAAACACCGGAGTGATATCGTGTAGTGAC
TGAACAAAGAAAAAAAAAAGGCGGTGCGCCTAAAGAAACGAACGTTACAT
CACACGCGCTGCGGAACCAATAGCGTCTCACAAGGGTCCGAAAAACACAA
ACACCGGCGCAGCCGGATCACGCGACCGGCAAGCAA
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