EY710299

Overview
NameEY710299
Unique NameEY710299
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1054
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710299 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 7.822e-74
Identity = 145/262 (55.34%), Postives = 175/262 (66.79%), Query Frame = 1
Query:    7 VRNYFTGKKDNLIHHFGNPRFELIRHDVVEPIFLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPIRFQTWLRGLIRLMEGDHGRSFLIPAILVNSPCLN*LRSGQKIIKPKMPGIKFQAKPRREDSPIKGKPKTYKRAKHASW 792
            V N+FTG+K N+ H  G+  FELI HDVVEP+++EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+F       + GL+ LM  +       P  L N      L   Q I      G + Q     +D P K KP   K      W
Sbjct:  118 VDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQY-VSDLVNGLVALMNSNVSS----PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374          
BLAST of EY710299 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 7.822e-74
Identity = 145/262 (55.34%), Postives = 175/262 (66.79%), Query Frame = 1
Query:    7 VRNYFTGKKDNLIHHFGNPRFELIRHDVVEPIFLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPIRFQTWLRGLIRLMEGDHGRSFLIPAILVNSPCLN*LRSGQKIIKPKMPGIKFQAKPRREDSPIKGKPKTYKRAKHASW 792
            V N+FTG+K N+ H  G+  FELI HDVVEP+++EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+F       + GL+ LM  +       P  L N      L   Q I      G + Q     +D P K KP   K      W
Sbjct:  118 VDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQY-VSDLVNGLVALMNSNVSS----PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374          
BLAST of EY710299 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 7.822e-74
Identity = 145/262 (55.34%), Postives = 175/262 (66.79%), Query Frame = 1
Query:    7 VRNYFTGKKDNLIHHFGNPRFELIRHDVVEPIFLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPIRFQTWLRGLIRLMEGDHGRSFLIPAILVNSPCLN*LRSGQKIIKPKMPGIKFQAKPRREDSPIKGKPKTYKRAKHASW 792
            V N+FTG+K N+ H  G+  FELI HDVVEP+++EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+F       + GL+ LM  +       P  L N      L   Q I      G + Q     +D P K KP   K      W
Sbjct:  118 VDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQY-VSDLVNGLVALMNSNVSS----PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374          
BLAST of EY710299 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 7.822e-74
Identity = 145/262 (55.34%), Postives = 175/262 (66.79%), Query Frame = 1
Query:    7 VRNYFTGKKDNLIHHFGNPRFELIRHDVVEPIFLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPIRFQTWLRGLIRLMEGDHGRSFLIPAILVNSPCLN*LRSGQKIIKPKMPGIKFQAKPRREDSPIKGKPKTYKRAKHASW 792
            V N+FTG+K N+ H  G+  FELI HDVVEP+++EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+F       + GL+ LM  +       P  L N      L   Q I      G + Q     +D P K KP   K      W
Sbjct:  118 VDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQY-VSDLVNGLVALMNSNVSS----PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374          
BLAST of EY710299 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.249e-71
Identity = 129/200 (64.50%), Postives = 158/200 (79.00%), Query Frame = 1
Query:    7 VRNYFTGKKDNLIHHFGNPRFELIRHDVVEPIFLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPIRFQTWLRGLIRLMEGD 606
            V N+FTG+K N+ H  G+  FELI HDVVEP+++EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ E LTVYG G+QTR+F       + GL+ LM  +
Sbjct:  119 VDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQY-VSDLVNGLVALMNSN 317          
BLAST of EY710299 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 8.095e-71
Identity = 141/262 (53.82%), Postives = 171/262 (65.27%), Query Frame = 1
Query:    7 VRNYFTGKKDNLIHHFGNPRFELIRHDVVEPIFLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPIRFQTWLRGLIRLMEGDHGRSFLIPAILVNSPCLN*LRSGQKIIKPKMPGIKFQAKPRREDSPIKGKPKTYKRAKHASW 792
            V N+FTG+K N+ H  G+  FELI HDVVEP+++EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+G RM ++DGRVVSNF+ QAL+ E LTVYG G QTR+F       + GL+ LM      +   P  L N      L   Q I          Q  P  +D P + +P   K      W
Sbjct:  116 VDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQY-VSDLVNGLVSLMNS----NISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGW 372          
BLAST of EY710299 vs. ExPASy Swiss-Prot
Match: STRE_STRGR (dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.075e-14
Identity = 54/183 (29.51%), Postives = 85/183 (46.45%), Query Frame = 1
Query:   19 FTGKKDNLIHHFGNPRFELIRHDVVEP----IFLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF 552
            + G  DNL    G+PR+   R D+ +     +    DQ+ HLA  +       +    ++TNV GT  +L  A R G A F+  ST EVYG  L+H      W    P+   S Y   K + + L + +H   G++ R+ R  N YGPR   +  +++  F+   +    + +YGDG   R +
Sbjct:   41 YAGNPDNLAAVRGHPRYRFERGDICDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQVSTDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREW 216          
BLAST of EY710299 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.519e-12
Identity = 57/189 (30.16%), Postives = 89/189 (47.09%), Query Frame = 1
Query:   13 NYFTGKKDNLIHHFGNPRFELIRHDVVEPI------FLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS--EVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSF 552
            N  TG K+N+     NP+ E +  D+ +        F +V+ + H A   +  +   NPV     NV+GT+N+L + ++     ++ ++S   VYG+P   P  E +     PI   S Y   K   E     Y+R  GIE  I R  N YG R     +  V+S F+ + L+ +   ++GDG QTR F
Sbjct:   31 NLTTGNKNNI-----NPKAEFVNADIRDKDLDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDF 209          
BLAST of EY710299 vs. ExPASy Swiss-Prot
Match: ACBB_ACTS5 (dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain 50/110) GN=acbB PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.477e-11
Identity = 54/186 (29.03%), Postives = 84/186 (45.16%), Query Frame = 1
Query:   19 FTGKKDNLIHHFGNPRFELIRHDV-----VEPIFLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR--VGARFLLTSTSEVYGDPLQHPQAET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF 552
            + G   NL     +PRF  +R D+     +E +    D + H A               + +N+VGT  +L  A R  +G RFL  ST EVYG        +T  W   +P+   S Y   K  ++ L + YH+  G++  + R  N YGPR   +  +++  FV + L    + VYGDG+  R +
Sbjct:   42 YGGNLRNLAEASADPRFSFVRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHIG-RFLHVSTDEVYGS------IDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDW 218          
The following BLAST results are available for this feature:
BLAST of EY710299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
UXS1_RAT7.822e-7455.34UDP-glucuronic acid decarboxylase 1 OS=Rattus norv... [more]
UXS1_PONAB7.822e-7455.34UDP-glucuronic acid decarboxylase 1 OS=Pongo abeli... [more]
UXS1_MOUSE7.822e-7455.34UDP-glucuronic acid decarboxylase 1 OS=Mus musculu... [more]
UXS1_HUMAN7.822e-7455.34UDP-glucuronic acid decarboxylase 1 OS=Homo sapien... [more]
UXS1_XENTR1.249e-7164.50UDP-glucuronic acid decarboxylase 1 OS=Xenopus tro... [more]
UXS1_DANRE8.095e-7153.82UDP-glucuronic acid decarboxylase 1 OS=Danio rerio... [more]
STRE_STRGR1.075e-1429.51dTDP-glucose 4,6-dehydratase OS=Streptomyces grise... [more]
GALE_METJA6.519e-1230.16Putative UDP-glucose 4-epimerase OS=Methanocaldoco... [more]
ACBB_ACTS52.477e-1129.03dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-C03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710299 ID=EY710299; Name=EY710299; organism=Citrus sinensis; type=EST; length=1054bp
CCACGCGTCCGTAATTATTTTACCGGTAAAAAGGATAACTTGATTCACCA
TTTTGGTAACCCGCGGTTCGAGCTCATTCGACACGACGTCGTGGAGCCAA
TTTTTCTAGAAGTTGATCAGATCTACCATCTTGCTTGCCCCGCCTCGCCT
GTTCATTACAAGTTCAATCCTGTCAAGACCATCAAGACGAACGTGGTGGG
GACACTCAACATGTTAGGGCTAGCTAAAAGAGTTGGGGCACGGTTCTTGT
TAACAAGCACTAGTGAAGTGTACGGTGACCCTTTACAGCATCCGCAGGCC
GAGACCTACTGGGGCAATGTCAACCCCATCGGTGTAAGAAGCTGTTATGA
TGAGGGCAAGCGCACAGCAGAGACCTTGACCATGGACTATCATCGAGGAC
TTGGAATTGAGGCGAGGATTGCTAGGATTTTTAACACTTATGGACCACGA
ATGTGCATTGATGATGGTCGTGTTGTGAGCAACTTTGTCGCCCAAGCGTT
GAGGAAGGAGCCATTGACTGTTTATGGCGATGGAAAACAGACTAGAAGTT
TTCCAATTCGTTTTCAGACCTGGTTGAGGGGCCTAATAAGGCTAATGGAG
GGCGATCATGGTCGGTCCTTTTTAATCCCGGCAATCCTGGTGAATTCACC
ATGCTTGAACTAACTGAGGTCGGGGCAAAAGATAATAAAACCGAAAATGC
CAGGGATAAAATTTCAGGCCAAACCCCGAAGGGAAGATTCCCCCATAAAA
GGGAAGCCCAAAACTTACAAAAGGGCTAAACACGCTTCCTGGGGGGGGGA
ACCAAAAAAGGGACCCTCCGGGAAAGGGGGTTTCCCCCTCCAGGGGGTGC
CCAAATTCCCGGGGCCTCCAAAATTTTTTGGGGGGAACACAAAAAGGAAA
AATCGGGCGGGGGGGGGGGGGGGGGGGGGGAGGGGGGAGAGCCCCCCCCT
TCCTTTTTTTTTCTCTAGGTTTGTTTCTCCGGGGCCAAAATTTTTAAAAA
TTCTCCCCCCCATGGGGGATTTTTGTGGGTGGGGGGGGGGAAAAAAACGA
GAGA
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