EY684951
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AX_CICAR (Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 7.969e-48 Identity = 101/126 (80.16%), Postives = 103/126 (81.75%), Query Frame = 2 Query: 143 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520 PKASKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNK NRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL KK+GKG GEIGSAS +F Sbjct: 14 PKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 139
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXB_ARATH (Probable histone H2AXb OS=Arabidopsis thaliana GN=At1g54690 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 9.741e-46 Identity = 97/126 (76.98%), Postives = 101/126 (80.16%), Query Frame = 2 Query: 143 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520 PKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL K+GK G+IGSAS +F Sbjct: 17 PKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDIGSASQEF 142
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXA_ARATH (Probable histone H2AXa OS=Arabidopsis thaliana GN=At1g08880 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 2.170e-45 Identity = 96/126 (76.19%), Postives = 101/126 (80.16%), Query Frame = 2 Query: 143 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520 PKA+KSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAP GNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL K+GK G+IGSAS +F Sbjct: 17 PKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDIGSASQEF 142
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AX_PICAB (Histone H2AX OS=Picea abies PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.834e-45 Identity = 96/125 (76.80%), Postives = 100/125 (80.00%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520 K++KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LL KK GK GEIGSAS +F Sbjct: 14 KSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLPKKSGKDKGEIGSASQEF 138
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSJ (Probable histone H2AXb OS=Oryza sativa subsp. japonica GN=Os12g0530000 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 7.718e-43 Identity = 93/125 (74.40%), Postives = 98/125 (78.40%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520 K SKSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP GNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNIHQTLL KK GK +IGSAS +F Sbjct: 14 KGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGGKDKADIGSASQEF 138
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSI (Probable histone H2AXb OS=Oryza sativa subsp. indica GN=OsI_037312 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 7.718e-43 Identity = 93/125 (74.40%), Postives = 98/125 (78.40%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520 K SKSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP GNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNIHQTLL KK GK +IGSAS +F Sbjct: 14 KGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGGKDKADIGSASQEF 138
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSJ (Probable histone H2AXa OS=Oryza sativa subsp. japonica GN=Os03g0721900 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.745e-40 Identity = 90/125 (72.00%), Postives = 97/125 (77.60%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520 K +K+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP GNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNI Q LL KK G G G+IGSAS +F Sbjct: 14 KTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKK-GGGKGDIGSASQEF 137
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSI (Probable histone H2AXa OS=Oryza sativa subsp. indica GN=OsI_012923 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.745e-40 Identity = 90/125 (72.00%), Postives = 97/125 (77.60%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520 K +K+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP GNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNI Q LL KK G G G+IGSAS +F Sbjct: 14 KTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKK-GGGKGDIGSASQEF 137
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.665e-37 Identity = 83/111 (74.77%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG 481 A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LL KK G Sbjct: 13 AKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG 123
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A6_ARATH (Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.710e-37 Identity = 82/111 (73.87%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG 481 A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LL KK G Sbjct: 13 AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG 123 The following BLAST results are available for this feature:
BLAST of EY684951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684951 ID=EY684951; Name=EY684951; organism=Citrus sinensis; type=EST; length=929bpback to top |