EY684951

Overview
NameEY684951
Unique NameEY684951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AX_CICAR (Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.969e-48
Identity = 101/126 (80.16%), Postives = 103/126 (81.75%), Query Frame = 2
Query:  143 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520
            PKASKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNK NRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL KK+GKG GEIGSAS +F
Sbjct:   14 PKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 139          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXB_ARATH (Probable histone H2AXb OS=Arabidopsis thaliana GN=At1g54690 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.741e-46
Identity = 97/126 (76.98%), Postives = 101/126 (80.16%), Query Frame = 2
Query:  143 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520
            PKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL  K+GK  G+IGSAS +F
Sbjct:   17 PKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDIGSASQEF 142          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXA_ARATH (Probable histone H2AXa OS=Arabidopsis thaliana GN=At1g08880 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.170e-45
Identity = 96/126 (76.19%), Postives = 101/126 (80.16%), Query Frame = 2
Query:  143 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520
            PKA+KSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL  K+GK  G+IGSAS +F
Sbjct:   17 PKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDIGSASQEF 142          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AX_PICAB (Histone H2AX OS=Picea abies PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.834e-45
Identity = 96/125 (76.80%), Postives = 100/125 (80.00%), Query Frame = 2
Query:  146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520
            K++KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LL KK GK  GEIGSAS +F
Sbjct:   14 KSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLPKKSGKDKGEIGSASQEF 138          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSJ (Probable histone H2AXb OS=Oryza sativa subsp. japonica GN=Os12g0530000 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.718e-43
Identity = 93/125 (74.40%), Postives = 98/125 (78.40%), Query Frame = 2
Query:  146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520
            K SKSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP                  GNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNIHQTLL KK GK   +IGSAS +F
Sbjct:   14 KGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGGKDKADIGSASQEF 138          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSI (Probable histone H2AXb OS=Oryza sativa subsp. indica GN=OsI_037312 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.718e-43
Identity = 93/125 (74.40%), Postives = 98/125 (78.40%), Query Frame = 2
Query:  146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520
            K SKSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP                  GNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNIHQTLL KK GK   +IGSAS +F
Sbjct:   14 KGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGGKDKADIGSASQEF 138          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSJ (Probable histone H2AXa OS=Oryza sativa subsp. japonica GN=Os03g0721900 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.745e-40
Identity = 90/125 (72.00%), Postives = 97/125 (77.60%), Query Frame = 2
Query:  146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520
            K +K+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP                  GNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNI Q LL KK G G G+IGSAS +F
Sbjct:   14 KTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKK-GGGKGDIGSASQEF 137          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSI (Probable histone H2AXa OS=Oryza sativa subsp. indica GN=OsI_012923 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.745e-40
Identity = 90/125 (72.00%), Postives = 97/125 (77.60%), Query Frame = 2
Query:  146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMGKGTGEIGSASPKF 520
            K +K+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP                  GNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNI Q LL KK G G G+IGSAS +F
Sbjct:   14 KTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKK-GGGKGDIGSASQEF 137          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.665e-37
Identity = 83/111 (74.77%), Postives = 84/111 (75.68%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG 481
            A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LL KK G
Sbjct:   13 AKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG 123          
BLAST of EY684951 vs. ExPASy Swiss-Prot
Match: H2A6_ARATH (Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.710e-37
Identity = 82/111 (73.87%), Postives = 84/111 (75.68%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLHKKMG 481
            A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LL KK G
Sbjct:   13 AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG 123          
The following BLAST results are available for this feature:
BLAST of EY684951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2AX_CICAR7.969e-4880.16Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1[more]
H2AXB_ARATH9.741e-4676.98Probable histone H2AXb OS=Arabidopsis thaliana GN=... [more]
H2AXA_ARATH2.170e-4576.19Probable histone H2AXa OS=Arabidopsis thaliana GN=... [more]
H2AX_PICAB4.834e-4576.80Histone H2AX OS=Picea abies PE=2 SV=1[more]
H2AXB_ORYSJ7.718e-4374.40Probable histone H2AXb OS=Oryza sativa subsp. japo... [more]
H2AXB_ORYSI7.718e-4374.40Probable histone H2AXb OS=Oryza sativa subsp. indi... [more]
H2AXA_ORYSJ2.745e-4072.00Probable histone H2AXa OS=Oryza sativa subsp. japo... [more]
H2AXA_ORYSI2.745e-4072.00Probable histone H2AXa OS=Oryza sativa subsp. indi... [more]
H2A3_ARATH1.665e-3774.77Probable histone H2A.3 OS=Arabidopsis thaliana GN=... [more]
H2A6_ARATH3.710e-3773.87Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-F11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684951 ID=EY684951; Name=EY684951; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGAAGCAATTTCACCGATCTTTTTTGTGGCTTCACTTTCAA
TCGCTTCAAACCAAACCGAAATCTAGGGTTAGGGTTTTTCTGTAATAAGA
ATGAGTTCAACTGGAGGGTCAACGAAGGGCGGCAGGGGTAAGCCGAAGGC
TTCGAAATCGGTCTCGCGGTCGCATAAGGCGGGCCTTCAGTTCCCGGTGG
GCAGGATCGCTAGGTTTTTGAAGGCCGGAAAGTACGCTGAGCGAGTCGGC
GCCGGAGCTCCTGTTTACCTCTCTGCCGTGCTTGAGTACCTCGCTGCTGA
GGTTCTGGAGCTTGCTGGCAATGCAGCAAGGGACAACAAGAAGAACCGTA
TAGTGCCAAGGCATATTCAGCTTGCAGTTCGAAATGATGAGGAATTGAGC
AAGCTGCTGGGGTCGGTTACCATTGCCAATGGAGGTGTTTTACCCAACAT
TCACCAGACGCTGCTTCACAAGAAGATGGGGAAAGGAACGGGTGAAATTG
GCTCTGCTTCTCCCAAATTCTACACTCTGCTCCTCCCGAATTATACTAGT
AGCCAGGAACCAAACACCCCCCCCAACCACACGCACGAACATTCAGCCCT
CACGAAAACCGGACATGGGCTTTGATCACCTTGAACGACGAAACAAGCAA
GGGAATAGCAGAACGATCACCCCAAGACGCACAAACCACAGACTACACGC
CAGGCCCGCCAGCGGCCTAAACGACGACCCCGCAACCAACACCGACGAGA
ACGACAGAGCTAGCAGTAACAAACGCAAAGACACAGACAAGGAAACGAAC
TGAAATAGGGCGAAGCAAAGCGACCAGAACAGAGCCTCAACTCAGGAAAT
GGGCCCGCACCCCCGCACGATTGTGGGCCTGCCCGAAGAACCCCCCCGCC
ACACAACTCACACACGACACGATAAAGCA
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