EY684906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2A2B_ARATH (Splicing factor U2af large subunit B OS=Arabidopsis thaliana GN=U2AF65B PE=2 SV=2) HSP 1 Score: 353.599 bits (906), Expect = 8.400e-97 Identity = 171/215 (79.53%), Postives = 192/215 (89.30%), Query Frame = 3 Query: 9 PPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAHSGQSKTEQESILAQAQQHITIQK 653 PP ANEQ+++TFFSQVM+AIGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGII EGV V+VRRPTDYNP+LAA LGP QP+PNLNL AVGL+SG+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L GF+LVKDR+TGNSKGY FCVYQDP+VTDIACAALNG+KMGDKTLTVRRA + Q K EQE +L AQQ I +Q+ Sbjct: 263 PPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIALQR 477
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2A2B_ORYSJ (Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica GN=U2AF65B PE=2 SV=2) HSP 1 Score: 351.288 bits (900), Expect = 4.169e-96 Identity = 169/215 (78.60%), Postives = 190/215 (88.37%), Query Frame = 3 Query: 9 PPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAHSGQSKTEQESILAQAQQHITIQK 653 PP ANEQ++A +F+QVM AIGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAAALGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQESIL QAQQ + +QK Sbjct: 222 PPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQLQK 436
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2A2B_WHEAT (Splicing factor U2af large subunit B OS=Triticum aestivum GN=U2AF65B PE=2 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 4.609e-95 Identity = 168/215 (78.14%), Postives = 189/215 (87.91%), Query Frame = 3 Query: 9 PPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAHSGQSKTEQESILAQAQQHITIQK 653 PP ANEQ++A +F+QVM AIGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAAALGP QPS NLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA S Q + EQE+IL QAQQ + +QK Sbjct: 215 PPSANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSSNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQPRPEQENILLQAQQQVQLQK 429
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2A2A_NICPL (Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia GN=U2AF65A PE=2 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 7.862e-95 Identity = 169/215 (78.60%), Postives = 188/215 (87.44%), Query Frame = 3 Query: 9 PPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAHSGQSKTEQESILAQAQQHITIQK 653 PP ANEQ++ATFFS VM AIGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDG+IFEG V+VRRP+DYNP+LAA LGP QPSPNLNLAAVG G+ GG EGPDR+FVGGLPYYFTE+QI+ELLESFG L GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q EQES+L AQQ I +Q+ Sbjct: 229 PPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQR 443
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2A2B_NICPL (Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia GN=U2AF65B PE=2 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 2.988e-94 Identity = 168/215 (78.14%), Postives = 189/215 (87.91%), Query Frame = 3 Query: 9 PPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAHSGQSKTEQESILAQAQQHITIQK 653 P ANEQ++ATFFS VM+AIGGN+AGPGDAVVNVYIN+EKKFAFVEMR+VEEASNAMALDGIIFEG +VRRP+DYNP+LAA LGP QP+PNLNLAAVGL+ G+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K EQES+L AQQ I +Q+ Sbjct: 247 PAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQR 461
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2A2A_ARATH (Splicing factor U2af large subunit A OS=Arabidopsis thaliana GN=U2AF65A PE=2 SV=2) HSP 1 Score: 344.354 bits (882), Expect = 5.096e-94 Identity = 167/214 (78.04%), Postives = 188/214 (87.85%), Query Frame = 3 Query: 12 PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAHSGQSKTEQESILAQAQQHITIQK 653 P ANEQ++ATFFSQVM A+GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAM+LDGIIFEG V+VRRP+DYNP+LAA LGP QPSP+LNLAAVGL GA GG EGPDR+FVGGLPYYFTE+Q++ELLESFG L GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + K EQE++L AQQ I Q+ Sbjct: 248 PTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQR 461
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2A2A_ORYSJ (Splicing factor U2af large subunit A OS=Oryza sativa subsp. japonica GN=U2AF65A PE=2 SV=2) HSP 1 Score: 340.887 bits (873), Expect = 5.634e-93 Identity = 163/215 (75.81%), Postives = 185/215 (86.05%), Query Frame = 3 Query: 9 PPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAHSGQSKTEQESILAQAQQHITIQK 653 PP ANE +A +F+QVM A+GGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAAALGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQES+L QQ +QK Sbjct: 246 PPTANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQAQMQK 460
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2A2A_WHEAT (Splicing factor U2af large subunit A OS=Triticum aestivum GN=U2AF65A PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 7.880e-87 Identity = 154/215 (71.63%), Postives = 183/215 (85.12%), Query Frame = 3 Query: 9 PPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAHSGQSKTEQESILAQAQQHITIQK 653 PP+ANEQ +A FF+QVM AIGGN+ G AVVNVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+ AAALGP QP+PNLNLAAVGL GA GG EGPDR+FVGGLPYYFTE Q++ELLE+FG L GFD+VKD++TGNSKGY FC+Y+D VTDIACAALNG+++GD+TLTVRRA + + EQE+IL QAQQ +++ Sbjct: 280 PPIANEQTVAVFFNQVMAAIGGNTFALGHAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSQAAALGPSQPNPNLNLAAVGLTPGAGGGLEGPDRIFVGGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLYKDGTVTDIACAALNGIQLGDRTLTVRRAN-QGAEPRPEQENILLQAQQEAQMKR 493
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2AF2_MOUSE (Splicing factor U2AF 65 kDa subunit OS=Mus musculus GN=U2af2 PE=1 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38 Identity = 87/185 (47.03%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 24 EQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 578 E+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++ G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC Y D VTD A A LNG+++GDK L V+RA+ Sbjct: 162 EEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS 336
BLAST of EY684906 vs. ExPASy Swiss-Prot
Match: U2AF2_HUMAN (Splicing factor U2AF 65 kDa subunit OS=Homo sapiens GN=U2AF2 PE=1 SV=4) HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38 Identity = 87/185 (47.03%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 24 EQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 578 E+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++ G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC Y D VTD A A LNG+++GDK L V+RA+ Sbjct: 162 EEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS 336 The following BLAST results are available for this feature:
BLAST of EY684906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684906 ID=EY684906; Name=EY684906; organism=Citrus sinensis; type=EST; length=871bpback to top |