EY710267

Overview
NameEY710267
Unique NameEY710267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT1_ARATH (Adenine phosphoribosyltransferase 1 OS=Arabidopsis thaliana GN=APT1 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.687e-28
Identity = 59/84 (70.24%), Postives = 71/84 (84.52%), Query Frame = 3
Query:   48 GRSFPKSIPCQYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 299
            G+   +    +YG D +EMHVGAV+ GERA+I+DDL+ATGGTL+AAIRLLERVGV +VECACVIELPELKG+E+LGE  LFVLV
Sbjct:  156 GKVISEEYSLEYGTDTIEMHVGAVEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGETSLFVLV 239          
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.450e-25
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 3
Query:   48 GRSFPKSIPCQYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 299
            G    +    +YG D +EMHVGAVQ  +R LIVDDL+ATGGTL AA +L+ERVG  VVECACVIELPELKGR++LG+ P+FVLV
Sbjct:   92 GEVISEEYSLEYGTDKIEMHVGAVQPNDRVLIVDDLIATGGTLCAAAKLIERVGAKVVECACVIELPELKGRDKLGDMPVFVLV 175          
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT2_ARATH (Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 3
Query:   48 GRSFPKSIPCQYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 299
            GR   +    +YG+D +EM V AV++ ERALI+DDLVATGGTLSA+I LLER G  VVECACV+ LP+ KG+ +L  KPL+VLV
Sbjct:   99 GRVISEEYELEYGRDCLEMSVEAVKSEERALIIDDLVATGGTLSASINLLERAGAEVVECACVVGLPKFKGQCKLKGKPLYVLV 182          
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT_DESOH (Adenine phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=apt PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.458e-17
Identity = 43/97 (44.33%), Postives = 67/97 (69.07%), Query Frame = 3
Query:    9 PVCSYEETPFFFLGRSFPKSIPCQYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 299
            PV    + PF  +G ++      +YG+ ++E+H  A+  GER ++VDDL+ATGGT+ A I L+E++G  VVECA VI+LP+LKGRE++ +  +F L+
Sbjct:   76 PVRKKGKIPFRTIGAAYS----LEYGESMVEIHEDAILKGERVVVVDDLIATGGTVKATIDLVEKLGGEVVECAFVIDLPDLKGREKIRDYKMFALM 168          
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT_RHOSK (Adenine phosphoribosyltransferase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=apt PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.823e-16
Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 3
Query:   48 GRSFPKSIPCQYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 272
            GR+   S   +YG+ V+E+H  A+QAGE+ L+VDDL+ATGGT  A I+L+E++G  VV CA V++LP+L GR+RL
Sbjct:   88 GRTISVSYQLEYGEAVVEVHDDAIQAGEKVLLVDDLLATGGTAEAGIKLIEQLGGQVVGCAFVVDLPDLGGRKRL 162          
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT_RHOS4 (Adenine phosphoribosyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=apt PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.823e-16
Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 3
Query:   48 GRSFPKSIPCQYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 272
            GR+   S   +YG+ V+E+H  A+QAGE+ L+VDDL+ATGGT  A I+L+E++G  VV CA V++LP+L GR+RL
Sbjct:   88 GRTISVSYQLEYGEAVVEVHDDAIQAGEKVLLVDDLLATGGTAEAGIKLIEQLGGQVVGCAFVVDLPDLGGRKRL 162          
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT_RHOS1 (Adenine phosphoribosyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=apt PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.994e-16
Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 3
Query:   48 GRSFPKSIPCQYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 272
            GR+   S   +YG+ V+E+H  A+QAGE+ L+VDDL+ATGGT  A I+L+E++G  VV CA V++LP+L GR RL
Sbjct:   88 GRTISVSYQLEYGEAVVEVHDDAIQAGEKVLLVDDLLATGGTAEAGIKLIEQLGDQVVGCAFVVDLPDLGGRRRL 162          
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT_RHOS5 (Adenine phosphoribosyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=apt PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 3
Query:   48 GRSFPKSIPCQYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 272
            GR+   S   +YG+ V+++H  A+QAGER L+VDDL+ATGGT  A IRL+E++G  VV CA V++LP+L GR++L
Sbjct:   88 GRTVSVSYQLEYGEAVVKVHDDAIQAGERILLVDDLLATGGTAEAGIRLIEQLGGEVVGCAFVVDLPDLGGRKKL 162          
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT_BORPD (Adenine phosphoribosyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=apt PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-15
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = 3
Query:   51 RSFPKSIPCQYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE--KPLFVLVS 302
            R+  +S   +YG   +EMH  +V+ G+R L+VDDL+ATGGT+ AAI+LL+R+G +VVE A +I+LPEL G  ++     PLF + S
Sbjct:   92 RTVAESYTLEYGNSSVEMHTDSVRTGQRVLLVDDLIATGGTMLAAIKLLQRLGANVVEAAAIIDLPELGGSGKVAATGTPLFTVCS 177          
BLAST of EY710267 vs. ExPASy Swiss-Prot
Match: APT_LACLA (Adenine phosphoribosyltransferase OS=Lactococcus lactis subsp. lactis GN=apt PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15
Identity = 39/74 (52.70%), Postives = 56/74 (75.68%), Query Frame = 3
Query:   78 QYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 299
            +YG D + MH  +++ G+R LIVDDL+ATGGT++A I L+E++G  VV CA +IEL ELKGRE++G+    VL+
Sbjct:   95 EYGTDTLTMHSDSIKPGQRVLIVDDLLATGGTIAATIELVEKMGGIVVGCAFLIELDELKGREKIGDYDYKVLM 168          
The following BLAST results are available for this feature:
BLAST of EY710267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
APT1_ARATH5.687e-2870.24Adenine phosphoribosyltransferase 1 OS=Arabidopsis... [more]
APT1_WHEAT3.450e-2565.48Adenine phosphoribosyltransferase 1 OS=Triticum ae... [more]
APT2_ARATH1.772e-2160.71Adenine phosphoribosyltransferase 2 OS=Arabidopsis... [more]
APT_DESOH3.458e-1744.33Adenine phosphoribosyltransferase OS=Desulfococcus... [more]
APT_RHOSK3.823e-1653.33Adenine phosphoribosyltransferase OS=Rhodobacter s... [more]
APT_RHOS43.823e-1653.33Adenine phosphoribosyltransferase OS=Rhodobacter s... [more]
APT_RHOS14.994e-1653.33Adenine phosphoribosyltransferase OS=Rhodobacter s... [more]
APT_RHOS58.518e-1653.33Adenine phosphoribosyltransferase OS=Rhodobacter s... [more]
APT_BORPD1.112e-1547.67Adenine phosphoribosyltransferase OS=Bordetella pe... [more]
APT_LACLA2.478e-1552.70Adenine phosphoribosyltransferase OS=Lactococcus l... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-091-H05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710267 ID=EY710267; Name=EY710267; organism=Citrus sinensis; type=EST; length=604bp
CCACGCGTCCGGTTTGTTCCTATGAGGAAACCCCCTTTTTCTTCCTGGGG
AGGTCATTTCCGAAGAGTATTCCTTGCCAATATGGAAAAGATGTAATGGA
GATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACG
ATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAG
CGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGA
GCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAA
GCTAAACTTGATCTCAGTTTATGGTTTAAATGCAATGTTTGTGGACCATA
TGGGTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAA
CCTTCTGATTAATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAG
AGGTTGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGG
GTTTAAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCT
GTATTTGAAGGTTTTCAAATTATCTGGAGATTCTATCCAAAAAAAAAAAA
AAAA
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