EY684801

Overview
NameEY684801
Unique NameEY684801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10494 contig Csv1_Contig10494:756..1600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY684801 vs. ExPASy Swiss-Prot
Match: ABIL2_ARATH (Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.209e-29
Identity = 80/184 (43.48%), Postives = 97/184 (52.72%), Query Frame = 1 
Query:   28 STTRPTKSKYIGCSLDDEDDWHQFRNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSFTSTMPKKDQDKRTVSPHRFPLLRSGSISNRPKIPNAGRPMTPNSSRPTTPNASDAKRRYPSEPRKSYSMRMPAERENCKDFE-QHPXXXXXXXXXXXXXXXXXXDDMLYTYLDEY 576
            + T   K KY G SL+D DDW+QFRNAV                                    ATFSFTST+PKK+QDKR+VSPHRFPLLRSGS++ R K  +  RP TP+ SR  TP       RYPSEPR+S S+R+  E++N K+ E Q P                  DD LYT+LDEY
Sbjct:  143 TATNLEKLKYFGSSLEDADDWNQFRNAVRATIRETPPPPVRKSTSQSSSPRQPPQRS-------ATFSFTSTIPKKEQDKRSVSPHRFPLLRSGSVATR-KSASISRPTTPSKSRSITP------IRYPSEPRRSASVRVAFEKDNQKETEQQQPSKSKRLLKALLSRRKTKKDDTLYTFLDEY 312
[Close]
BLAST of EY684801 vs. ExPASy Swiss-Prot
Match: ABIL3_ARATH (Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.672e-25
Identity = 76/181 (41.99%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:   46 KSKYIGCSLDDEDDWHQFRNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSFTS--TMPKKDQDKRTVSPHRFPLLRSGSISNRPKIPNAGRPMTPNSSRPTTPNASDAKRRYPSEPRKSYSMRMPAERENCK--DFEQHPXXXXXXXXXXXXXXXXXXDDMLYTYLDEY 576
            K K +  S D EDDW+QFRNAV                                    ATFSF+S  T PKK+QDKR VSPHRFPLLRSGS++ RP   +  RP TP+ SR  TP      +RYPSEPR+S S+R+  E+E  K  + +Q P                  DD LYTYLDEY
Sbjct:  155 KLKNVEGSFDGEDDWNQFRNAVRATIRETPPPPVRKPILQSPSQRKPQRS--------ATFSFSSIATAPKKEQDKRAVSPHRFPLLRSGSVAIRPS--SISRPTTPSKSRAVTP----TPKRYPSEPRRSASVRVAFEKEAQKEPEHQQQPSKSKRLLKALLSRRKTKKDDTLYTYLDEY 321
The following BLAST results are available for this feature:
BLAST of EY684801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ABIL2_ARATH3.209e-2943.48Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=... [more]
ABIL3_ARATH3.672e-2541.99Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-H01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684801 ID=EY684801; Name=EY684801; organism=Citrus sinensis; type=EST; length=845bp
CAGCTGCAGTACGGTCGGAATTCCGGGTCGACCACGCGTCCGACCAAGTC
CAAGTACATTGGATGCAGCCTAGATGATGAAGATGACTGGCATCAGTTTA
GGAATGCTGTTCGAGCTACAATTACTGAAACCCCAAGAGAAACACCTAGG
GAAACCCCAGCATCTTCAGTTAGGAAAGGACGTTCTCCCTCACCTTCACC
AAGACCTCCACAACGATCAGCCACATTTTCCTTTACATCAACCATGCCCA
AAAAAGATCAAGATAAGCGTACAGTGTCACCACACCGGTTTCCACTTTTG
CGTTCTGGTTCAATCTCAAATAGGCCGAAAATCCCAAATGCTGGAAGGCC
AATGACCCCAAATTCAAGTAGACCAACAACTCCAAATGCTTCTGATGCAA
AACGACGGTACCCTTCGGAGCCTCGAAAATCATATTCCATGCGTATGCCT
GCTGAAAGGGAAAACTGTAAAGACTTTGAACAACACCCCAGCAAAAGTAA
ACGGCTCCTTAAGGCATTACTTAGTAGGCGCAAATCAAAGAAAGATGACA
TGCTATATACTTATCTGGATGAATACTGATGAAATACATATACTGCTTGC
AAAGAAAAGGCAAGCAACCAGGGAAAGACATCCTGTACGGGAAAGGACTG
TGAGATTGCACTCTGTTTGCCCTTTGTTTGAATGATTTTTTTCCCCCTTT
ATATAGTTTTAATGGATTACTAAAAGTAGAAGGGACTTATCTTTTATTAT
CTTTTTCCAGTCCTCAATTAACTTGAAAAATTGGGGGGCAATGTTGATGT
TTCTATCAATGGATCCCGGGGCTTGGTTCCCCACGAAGAAGCAAC
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